RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 GALNTL5Q7Z4T8 443 aa11.9□□□□□ -0.5
SKA1-205ENST00000494518 KIF2BQ8N4N8 673 aa11.9□□□□□ -0.5
SKA1-205ENST00000494518 CAMKVQ8NCB2 501 aa11.9□□□□□ -0.5
SKA1-205ENST00000494518 MDS2Q8NDY4 140 aa11.9□□□□□ -0.5
SKA1-205ENST00000494518 EEF1AKMT1Q8WVE0 214 aa11.9□□□□□ -0.5
SKA1-205ENST00000494518 SLC13A3Q8WWT9 602 aa11.9□□□□□ -0.5
SKA1-205ENST00000494518 MAGOHBQ96A72 148 aaKnown RBP11.9□□□□□ -0.5
SKA1-205ENST00000494518 MS4A14Q96JA4 679 aa11.9□□□□□ -0.5
SKA1-205ENST00000494518 UTP23Q9BRU9 249 aaKnown RBP11.9□□□□□ -0.5
SKA1-205ENST00000494518 XAB2Q9HCS7 855 aaKnown RBP11.9□□□□□ -0.5
SKA1-205ENST00000494518 KLHL42Q9P2K6 505 aa11.9□□□□□ -0.5
SKA1-205ENST00000494518 SLC17A6Q9P2U8 582 aa11.9□□□□□ -0.5
SKA1-205ENST00000494518 ITGB1BP2Q9UKP3 347 aa11.9□□□□□ -0.5
SKA1-205ENST00000494518 SPG11Q96JI7 2443 aa11.9□□□□□ -0.5
SKA1-205ENST00000494518 KCNE1BA0A087WTH5 132 aa11.89□□□□□ -0.51
SKA1-205ENST00000494518 BANF1O75531 89 aa11.89□□□□□ -0.51
SKA1-205ENST00000494518 CD46P15529 392 aa11.89□□□□□ -0.51
SKA1-205ENST00000494518 EEF1DP29692 281 aaKnown RBP11.89□□□□□ -0.51
SKA1-205ENST00000494518 AGTR2P50052 363 aa11.89□□□□□ -0.51
SKA1-205ENST00000494518 OR4D2P58180 307 aa11.89□□□□□ -0.51
SKA1-205ENST00000494518 TIAL1Q01085 375 aaKnown RBP eCLIP11.89□□□□□ -0.51
SKA1-205ENST00000494518 RHAGQ02094 409 aa11.89□□□□□ -0.51
SKA1-205ENST00000494518 USP10Q14694 798 aaKnown RBP11.89□□□□□ -0.51
SKA1-205ENST00000494518 PHKG1Q16816 387 aa11.89□□□□□ -0.51
SKA1-205ENST00000494518 ZNF468Q5VIY5 522 aaPredicted RBP11.89□□□□□ -0.51
SKA1-205ENST00000494518 H3F3CQ6NXT2 135 aa11.89□□□□□ -0.51
SKA1-205ENST00000494518 MTFR2Q6P444 385 aa11.89□□□□□ -0.51
SKA1-205ENST00000494518 C3P1Q6ZMU1 363 aa11.89□□□□□ -0.51
SKA1-205ENST00000494518 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.89□□□□□ -0.51
SKA1-205ENST00000494518 CYP4X1Q8N118 509 aa11.89□□□□□ -0.51
SKA1-205ENST00000494518 M1APQ8TC57 530 aa11.89□□□□□ -0.51
SKA1-205ENST00000494518 PYCR2Q96C36 320 aa11.89□□□□□ -0.51
SKA1-205ENST00000494518 TM4SF19Q96DZ7 209 aa11.89□□□□□ -0.51
SKA1-205ENST00000494518 LINGO1Q96FE5 620 aa11.89□□□□□ -0.51
SKA1-205ENST00000494518 LURAP1Q96LR2 239 aa11.89□□□□□ -0.51
SKA1-205ENST00000494518 GPR137Q96N19 417 aa11.89□□□□□ -0.51
SKA1-205ENST00000494518 CDCP1Q9H5V8 836 aa11.89□□□□□ -0.51
SKA1-205ENST00000494518 LANCL2Q9NS86 450 aa11.89□□□□□ -0.51
SKA1-205ENST00000494518 HOMER3Q9NSC5 361 aa11.89□□□□□ -0.51
SKA1-205ENST00000494518 MTORP42345 2549 aa11.89□□□□□ -0.51
SKA1-205ENST00000494518 MAGEB16A2A368 324 aa11.88□□□□□ -0.51
SKA1-205ENST00000494518 NDUFS4O43181 175 aa11.88□□□□□ -0.51
SKA1-205ENST00000494518 OR1F1O43749 312 aa11.88□□□□□ -0.51
SKA1-205ENST00000494518 B4GALT2O60909 372 aa11.88□□□□□ -0.51
SKA1-205ENST00000494518 CCDC175P0C221 793 aa11.88□□□□□ -0.51
SKA1-205ENST00000494518 SLC35G6P0C7Q6 338 aa11.88□□□□□ -0.51
SKA1-205ENST00000494518 MLNP12872 115 aa11.88□□□□□ -0.51
SKA1-205ENST00000494518 HRH2P25021 359 aa11.88□□□□□ -0.51
SKA1-205ENST00000494518 CDKN2DP55273 166 aa11.88□□□□□ -0.51
SKA1-205ENST00000494518 SLC26A5P58743 744 aa11.88□□□□□ -0.51
SKA1-205ENST00000494518 EXT1Q16394 746 aa11.88□□□□□ -0.51
SKA1-205ENST00000494518 MAPKAPK3Q16644 382 aa11.88□□□□□ -0.51
SKA1-205ENST00000494518 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.88□□□□□ -0.51
SKA1-205ENST00000494518 DEFB134Q4QY38 66 aa11.88□□□□□ -0.51
SKA1-205ENST00000494518 PAQR3Q6TCH7 311 aa11.88□□□□□ -0.51
SKA1-205ENST00000494518 PALM2Q8IXS6 379 aa11.88□□□□□ -0.51
SKA1-205ENST00000494518 MYO1HQ8N1T3 1032 aa11.88□□□□□ -0.51
SKA1-205ENST00000494518 SLC5A8Q8N695 610 aa11.88□□□□□ -0.51
SKA1-205ENST00000494518 MFSD9Q8NBP5 474 aa11.88□□□□□ -0.51
SKA1-205ENST00000494518 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.88□□□□□ -0.51
SKA1-205ENST00000494518 ZNF740Q8NDX6 193 aa11.88□□□□□ -0.51
SKA1-205ENST00000494518 MCUQ8NE86 351 aa11.88□□□□□ -0.51
SKA1-205ENST00000494518 TRIM58Q8NG06 486 aa11.88□□□□□ -0.51
SKA1-205ENST00000494518 CALML6Q8TD86 181 aa11.88□□□□□ -0.51
SKA1-205ENST00000494518 THAP11Q96EK4 314 aa11.88□□□□□ -0.51
SKA1-205ENST00000494518 SCMH1Q96GD3 660 aa11.88□□□□□ -0.51
SKA1-205ENST00000494518 SIGLEC10Q96LC7 697 aa11.88□□□□□ -0.51
SKA1-205ENST00000494518 FRMD6Q96NE9 622 aa11.88□□□□□ -0.51
SKA1-205ENST00000494518 LPAR4Q99677 370 aa11.88□□□□□ -0.51
SKA1-205ENST00000494518 FAM167BQ9BTA0 163 aa11.88□□□□□ -0.51
SKA1-205ENST00000494518 TRIM8Q9BZR9 551 aa11.88□□□□□ -0.51
SKA1-205ENST00000494518 PCBD2Q9H0N5 130 aa11.88□□□□□ -0.51
SKA1-205ENST00000494518 SPNS1Q9H2V7 528 aa11.88□□□□□ -0.51
SKA1-205ENST00000494518 PARVBQ9HBI1 364 aa11.88□□□□□ -0.51
SKA1-205ENST00000494518 MMP25Q9NPA2 562 aa11.88□□□□□ -0.51
SKA1-205ENST00000494518 CHST11Q9NPF2 352 aa11.88□□□□□ -0.51
SKA1-205ENST00000494518 COMMD10Q9Y6G5 202 aa11.88□□□□□ -0.51
SKA1-205ENST00000494518 ZFHX3Q15911 3703 aa11.88□□□□□ -0.51
SKA1-205ENST00000494518 CTAGE15A4D2H0 777 aa11.87□□□□□ -0.51
SKA1-205ENST00000494518 A8MUA0 341 aa11.87□□□□□ -0.51
SKA1-205ENST00000494518 NDC80O14777 642 aa11.87□□□□□ -0.51
SKA1-205ENST00000494518 CHST10O43529 356 aa11.87□□□□□ -0.51
SKA1-205ENST00000494518 NEURL1O76050 574 aa11.87□□□□□ -0.51
SKA1-205ENST00000494518 C8GP07360 202 aa11.87□□□□□ -0.51
SKA1-205ENST00000494518 FHP07954 510 aa11.87□□□□□ -0.51
SKA1-205ENST00000494518 CYC1P08574 325 aa11.87□□□□□ -0.51
SKA1-205ENST00000494518 ZNF888P0CJ79 500 aaPredicted RBP11.87□□□□□ -0.51
SKA1-205ENST00000494518 ABOP16442 354 aa11.87□□□□□ -0.51
SKA1-205ENST00000494518 PTGER4P35408 488 aa11.87□□□□□ -0.51
SKA1-205ENST00000494518 GRK3P35626 688 aa11.87□□□□□ -0.51
SKA1-205ENST00000494518 HNF4AP41235 474 aa11.87□□□□□ -0.51
SKA1-205ENST00000494518 MAGEA3P43357 314 aa11.87□□□□□ -0.51
SKA1-205ENST00000494518 RGS4P49798 205 aa11.87□□□□□ -0.51
SKA1-205ENST00000494518 TAS2R50P59544 299 aa11.87□□□□□ -0.51
SKA1-205ENST00000494518 DHX9Q08211 1270 aaKnown RBP11.87□□□□□ -0.51
SKA1-205ENST00000494518 CRYMQ14894 314 aa11.87□□□□□ -0.51
SKA1-205ENST00000494518 RNFT1Q5M7Z0 435 aa11.87□□□□□ -0.51
SKA1-205ENST00000494518 CATSPEREQ5SY80 951 aa11.87□□□□□ -0.51
SKA1-205ENST00000494518 CCDC137Q6PK04 289 aaKnown RBP11.87□□□□□ -0.51
SKA1-205ENST00000494518 XKRXQ6PP77 449 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms