RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 ZNF460Q14592 562 aa7.64□□□□□ -1.19
BRCA1-221ENST00000493795 ZNF181Q2M3W8 571 aa7.64□□□□□ -1.19
BRCA1-221ENST00000493795 GPRC6AQ5T6X5 926 aa7.64□□□□□ -1.19
BRCA1-221ENST00000493795 SPATA31D4Q6ZUB0 917 aa7.64□□□□□ -1.19
BRCA1-221ENST00000493795 AMZ2Q86W34 360 aa7.64□□□□□ -1.19
BRCA1-221ENST00000493795 KIF18BQ86Y91 864 aa7.64□□□□□ -1.19
BRCA1-221ENST00000493795 ESX1Q8N693 406 aa7.64□□□□□ -1.19
BRCA1-221ENST00000493795 C12orf29Q8N999 325 aa7.64□□□□□ -1.19
BRCA1-221ENST00000493795 FAM46DQ8NEK8 389 aa7.64□□□□□ -1.19
BRCA1-221ENST00000493795 TMEM125Q96AQ2 219 aa7.64□□□□□ -1.19
BRCA1-221ENST00000493795 ASB9Q96DX5 294 aa7.64□□□□□ -1.19
BRCA1-221ENST00000493795 ZNF514Q96K75 400 aaPredicted RBP7.64□□□□□ -1.19
BRCA1-221ENST00000493795 FUCA2Q9BTY2 467 aa7.64□□□□□ -1.19
BRCA1-221ENST00000493795 ZFP57Q9NU63 452 aa7.64□□□□□ -1.19
BRCA1-221ENST00000493795 SIRPGQ9P1W8 387 aa7.64□□□□□ -1.19
BRCA1-221ENST00000493795 CYP8B1Q9UNU6 501 aa7.64□□□□□ -1.19
BRCA1-221ENST00000493795 PLEKHM1Q9Y4G2 1056 aa7.64□□□□□ -1.19
BRCA1-221ENST00000493795 SLC35F4A4IF30 521 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 A8MV72 311 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-221ENST00000493795 TLX2O43763 284 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-221ENST00000493795 CNOT4O95628 575 aaKnown RBP7.63□□□□□ -1.19
BRCA1-221ENST00000493795 RAC2P15153 192 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 DNASE1P24855 282 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 PBX3P40426 434 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 DPP6P42658 865 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 RPL35P42766 123 aaKnown RBP7.63□□□□□ -1.19
BRCA1-221ENST00000493795 FASLGP48023 281 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 EIF2B1Q14232 305 aaKnown RBP7.63□□□□□ -1.19
BRCA1-221ENST00000493795 CARD16Q5EG05 197 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 LINGO4Q6UY18 593 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 C3P1Q6ZMU1 363 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 PLPPR4Q7Z2D5 763 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 GPR149Q86SP6 731 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 PLD4Q96BZ4 506 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 NUS1Q96E22 293 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 CNTNAP3BQ96NU0 1288 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 HBEGFQ99075 208 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 EFCAB11Q9BUY7 163 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 TSSK6Q9BXA6 273 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 DDX4Q9NQI0 724 aaKnown RBP7.63□□□□□ -1.19
BRCA1-221ENST00000493795 MAN2C1Q9NTJ4 1040 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 ZNF446Q9NWS9 450 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 EPHA6Q9UF33 1036 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 FKBPLQ9UIM3 349 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 DHDHQ9UQ10 334 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 DDTLA6NHG4 134 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-221ENST00000493795 CLIC1O00299 241 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 ACTL6BO94805 426 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 CH25HO95992 272 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 ACTR1BP42025 376 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 KLF1Q13351 362 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-221ENST00000493795 SLBPQ14493 270 aaKnown RBP eCLIP7.63□□□□□ -1.19
BRCA1-221ENST00000493795 FSTL4Q6MZW2 842 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 CXCL17Q6UXB2 119 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 ZNF367Q7RTV3 350 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 TSPAN33Q86UF1 283 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 PSD4Q8NDX1 1056 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 FBXO22Q8NEZ5 403 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 NFKBIDQ8NI38 313 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 MTERF1Q99551 399 aaKnown RBP7.63□□□□□ -1.19
BRCA1-221ENST00000493795 USB1Q9BQ65 265 aaKnown RBP7.63□□□□□ -1.19
BRCA1-221ENST00000493795 VPS29Q9UBQ0 182 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 REV1Q9UBZ9 1251 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 UTS2RQ9UKP6 389 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 ACSL5Q9ULC5 683 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 NDRG2Q9UN36 371 aaKnown RBP7.63□□□□□ -1.19
BRCA1-221ENST00000493795 FCF1Q9Y324 198 aaKnown RBP7.63□□□□□ -1.19
BRCA1-221ENST00000493795 EEF1E1O43324 174 aaKnown RBP7.63□□□□□ -1.19
BRCA1-221ENST00000493795 PAK4O96013 591 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-221ENST00000493795 H2BFMP0C1H6 154 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 NRIP1P48552 1158 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 RPP30P78346 268 aaKnown RBP7.63□□□□□ -1.19
BRCA1-221ENST00000493795 FOXK1P85037 733 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 GAD2Q05329 585 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 UBE2UQ5VVX9 321 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 PLEKHG7Q6ZR37 379 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 TMPPEQ6ZT21 453 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 NCCRP1Q6ZVX7 275 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-221ENST00000493795 ANKRD23Q86SG2 305 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 COMMD7Q86VX2 200 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 CARM1Q86X55 608 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 XYLT1Q86Y38 959 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 ALDH16A1Q8IZ83 802 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 SAMD12Q8N8I0 201 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 C7orf57Q8NEG2 295 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 OR6Q1Q8NGQ2 317 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 JOSD2Q8TAC2 188 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 TGM7Q96PF1 710 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 DPCDQ9BVM2 203 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-221ENST00000493795 NIFKQ9BYG3 293 aaKnown RBP7.63□□□□□ -1.19
BRCA1-221ENST00000493795 SRRDQ9UH36 339 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 CDC7O00311 574 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 NDUFS4O43181 175 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 NMBRP28336 390 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 NR0B1P51843 470 aaKnown RBP7.63□□□□□ -1.19
BRCA1-221ENST00000493795 NUDT6P53370 316 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 CAPSQ13938 189 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 ZNF829Q3KNS6 432 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-221ENST00000493795 MEDAGQ5VYS4 303 aa7.63□□□□□ -1.19
BRCA1-221ENST00000493795 RFWD3Q6PCD5 774 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms