RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 PDE7AQ13946 482 aa9.28□□□□□ -0.92
NPHP3-209ENST00000493732 SLBPQ14493 270 aaKnown RBP eCLIP9.28□□□□□ -0.92
NPHP3-209ENST00000493732 CYP2A13Q16696 494 aa9.28□□□□□ -0.92
NPHP3-209ENST00000493732 ZNF630Q2M218 657 aaPredicted RBP9.28□□□□□ -0.92
NPHP3-209ENST00000493732 CTU2Q2VPK5 515 aaKnown RBP9.28□□□□□ -0.92
NPHP3-209ENST00000493732 PROX2Q3B8N5 592 aa9.28□□□□□ -0.92
NPHP3-209ENST00000493732 GCNT6Q5T4J0 391 aa9.28□□□□□ -0.92
NPHP3-209ENST00000493732 LCTLQ6UWM7 567 aa9.28□□□□□ -0.92
NPHP3-209ENST00000493732 CHST15Q7LFX5 561 aaPredicted RBP9.28□□□□□ -0.92
NPHP3-209ENST00000493732 TRMT11Q7Z4G4 463 aaKnown RBP9.28□□□□□ -0.92
NPHP3-209ENST00000493732 RBM23Q86U06 439 aaKnown RBP9.28□□□□□ -0.92
NPHP3-209ENST00000493732 CYP4Z1Q86W10 505 aa9.28□□□□□ -0.92
NPHP3-209ENST00000493732 ANKRD13BQ86YJ7 626 aa9.28□□□□□ -0.92
NPHP3-209ENST00000493732 METTL4Q8N3J2 472 aa9.28□□□□□ -0.92
NPHP3-209ENST00000493732 BPIFB6Q8NFQ5 453 aa9.28□□□□□ -0.92
NPHP3-209ENST00000493732 OR52N2Q8NGI0 321 aa9.28□□□□□ -0.92
NPHP3-209ENST00000493732 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.28□□□□□ -0.92
NPHP3-209ENST00000493732 EZH1Q92800 747 aaPredicted RBP9.28□□□□□ -0.92
NPHP3-209ENST00000493732 ZSWIM3Q96MP5 696 aa9.28□□□□□ -0.92
NPHP3-209ENST00000493732 QRFPRQ96P65 431 aa9.28□□□□□ -0.92
NPHP3-209ENST00000493732 OR2AG1Q9H205 316 aa9.28□□□□□ -0.92
NPHP3-209ENST00000493732 DUSP21Q9H596 190 aa9.28□□□□□ -0.92
NPHP3-209ENST00000493732 EPS8L2Q9H6S3 715 aa9.28□□□□□ -0.92
NPHP3-209ENST00000493732 THUMPD1Q9NXG2 353 aaKnown RBP9.28□□□□□ -0.92
NPHP3-209ENST00000493732 NDRG4Q9ULP0 352 aaKnown RBP9.28□□□□□ -0.92
NPHP3-209ENST00000493732 ABCG2Q9UNQ0 655 aa9.28□□□□□ -0.92
NPHP3-209ENST00000493732 C5orf67F2Z3F1 127 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 hCG_2039718K7EN88 272 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 B4GAT1O43505 415 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 NDUFS2O75306 463 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 POP7O75817 140 aaKnown RBP9.27□□□□□ -0.93
NPHP3-209ENST00000493732 SEMA3DO95025 777 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 ETHE1O95571 254 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 ANXA8P13928 327 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 ADRB3P13945 408 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 EPCAMP16422 314 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 ZNF12P17014 697 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 CEBPBP17676 345 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 PRIM2P49643 509 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 VLDLRP98155 873 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 CTBSQ01459 385 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 TEKQ02763 1124 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 FPGSQ05932 587 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 RAPSNQ13702 412 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 STARD3Q14849 445 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 CCSMST1Q4G0I0 132 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 IFI44LQ53G44 452 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 FGD3Q5JSP0 725 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 C9orf64Q5T6V5 341 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 FAM46CQ5VWP2 391 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 CCDC80Q76M96 950 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 ERN2Q76MJ5 926 aaKnown RBP9.27□□□□□ -0.93
NPHP3-209ENST00000493732 COMMD6Q7Z4G1 85 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 ETFBKMTQ8IXQ9 262 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 RNF175Q8N4F7 328 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 GPR156Q8NFN8 814 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 FNDC8Q8TC99 324 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 CXorf40AQ8TE69 158 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 TPD52L3Q96J77 140 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 C7orf34Q96L11 122 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 PITX2Q99697 317 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 CCDC90BQ9GZT6 254 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 TBCCD1Q9NVR7 557 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 TAS2R9Q9NYW1 312 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 BTBD3Q9Y2F9 522 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 GPR89AB7ZAQ6 455 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 PTGES3LE9PB15 166 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 SLC22A1O15245 554 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 PFDN1O60925 122 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 CLPXO76031 633 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 B3GALT4O96024 378 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 SOD1P00441 154 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 FURINP09958 794 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 GPR89BP0CG08 455 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 C6P13671 934 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 ACADLP28330 430 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 CRATP43155 626 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 PXNP49023 591 aaPredicted RBP9.27□□□□□ -0.93
NPHP3-209ENST00000493732 ST13P50502 369 aaKnown RBP9.27□□□□□ -0.93
NPHP3-209ENST00000493732 SLC35A2P78381 396 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 NTHL1P78549 312 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 IL1RL1Q01638 556 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 OCA2Q04671 838 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 C2orf80Q0P641 193 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 NPRL3Q12980 569 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 SIM2Q14190 667 aaPredicted RBP9.27□□□□□ -0.93
NPHP3-209ENST00000493732 C16orf72Q14CZ0 275 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 PDGFRLQ15198 375 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 PRAMEF14Q5SWL7 426 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 PRAMEF13Q5VWM6 474 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 FAM71E1Q6IPT2 247 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 ANKRD26P1Q6NSI1 321 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 CRTC3Q6UUV7 619 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 TMIGD1Q6UXZ0 262 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 ADAMTSL4Q6UY14 1074 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 CEP68Q76N32 757 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 PAGE2Q7Z2X7 111 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 VTCN1Q7Z7D3 282 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 DCUN1D3Q8IWE4 304 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 RAB42Q8N4Z0 105 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms