RNA–Protein interactions for RNA: ENST00000493507.5

CCNB3-208, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 340 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-208ENST00000493507 SLFN11Q7Z7L1 901 aa4.8□□□□□ -1.64
CCNB3-208ENST00000493507 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.8□□□□□ -1.64
CCNB3-208ENST00000493507 SETD3Q86TU7 594 aaPredicted RBP4.8□□□□□ -1.64
CCNB3-208ENST00000493507 LRRTM4Q86VH4 590 aa4.8□□□□□ -1.64
CCNB3-208ENST00000493507 UMODL1-AS1Q8N2C9 162 aa4.8□□□□□ -1.64
CCNB3-208ENST00000493507 DPP10Q8N608 796 aa4.8□□□□□ -1.64
CCNB3-208ENST00000493507 SCAIQ8N9R8 606 aa4.8□□□□□ -1.64
CCNB3-208ENST00000493507 KDM1BQ8NB78 822 aa4.8□□□□□ -1.64
CCNB3-208ENST00000493507 ZNF548Q8NEK5 533 aaPredicted RBP4.8□□□□□ -1.64
CCNB3-208ENST00000493507 UCMAQ8WVF2 138 aa4.8□□□□□ -1.64
CCNB3-208ENST00000493507 RAPGEF5Q92565 580 aa4.8□□□□□ -1.64
CCNB3-208ENST00000493507 HSPH1Q92598 858 aa4.8□□□□□ -1.64
CCNB3-208ENST00000493507 PRCCQ92733 491 aaPredicted RBP4.8□□□□□ -1.64
CCNB3-208ENST00000493507 FAF2Q96CS3 445 aa4.8□□□□□ -1.64
CCNB3-208ENST00000493507 CSPG4P5Q96PW8 444 aa4.8□□□□□ -1.64
CCNB3-208ENST00000493507 TEFMQ96QE5 360 aaKnown RBP4.8□□□□□ -1.64
CCNB3-208ENST00000493507 KLF6Q99612 283 aaPredicted RBP4.8□□□□□ -1.64
CCNB3-208ENST00000493507 NPLQ9BXD5 320 aaPredicted RBP4.8□□□□□ -1.64
CCNB3-208ENST00000493507 EDEM3Q9BZQ6 932 aa4.8□□□□□ -1.64
CCNB3-208ENST00000493507 NAT10Q9H0A0 1025 aaKnown RBP4.8□□□□□ -1.64
CCNB3-208ENST00000493507 TCEAL2Q9H3H9 227 aaPredicted RBP4.8□□□□□ -1.64
CCNB3-208ENST00000493507 DHX35Q9H5Z1 703 aaKnown RBP4.8□□□□□ -1.64
CCNB3-208ENST00000493507 ZWILCHQ9H900 591 aa4.8□□□□□ -1.64
CCNB3-208ENST00000493507 PNRC2Q9NPJ4 139 aaKnown RBP4.8□□□□□ -1.64
CCNB3-208ENST00000493507 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.8□□□□□ -1.64
CCNB3-208ENST00000493507 RRN3Q9NYV6 651 aa4.8□□□□□ -1.64
CCNB3-208ENST00000493507 UPB1Q9UBR1 384 aa4.8□□□□□ -1.64
CCNB3-208ENST00000493507 ANAPC7Q9UJX3 599 aa4.8□□□□□ -1.64
CCNB3-208ENST00000493507 OSGIN2Q9Y236 505 aa4.8□□□□□ -1.64
CCNB3-208ENST00000493507 PCYT1BQ9Y5K3 369 aaPredicted RBP4.8□□□□□ -1.64
CCNB3-208ENST00000493507 U3KQA8 63 aa4.8□□□□□ -1.64
CCNB3-208ENST00000493507 APC2O95996 2303 aa4.8□□□□□ -1.64
CCNB3-208ENST00000493507 PIKFYVEQ9Y2I7 2098 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 A0A087WV48 116 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 TRBV5-7A0A0A0MS05 114 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.79□□□□□ -1.64
CCNB3-208ENST00000493507 TMEM272A0A1B0GTI8 110 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 TSPAN11A1L157 253 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 TARSL2A2RTX5 802 aaKnown RBP4.79□□□□□ -1.64
CCNB3-208ENST00000493507 FAM47DPA6NHR8 397 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 A6NNC1 897 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 TMEM110-MUSTN1A8MSY1 372 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 MEI4A8MW99 385 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 EEF2KO00418 725 aaKnown RBP4.79□□□□□ -1.64
CCNB3-208ENST00000493507 TRAFD1O14545 582 aaPredicted RBP4.79□□□□□ -1.64
CCNB3-208ENST00000493507 MCF2LO15068 1137 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 KDELR3O43731 214 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 SYNCRIPO60506 623 aaKnown RBP4.79□□□□□ -1.64
CCNB3-208ENST00000493507 PRAMEF11O60813 436 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 ZNF217O75362 1048 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 MTA2O94776 668 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 PROSCO94903 275 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 LCA5LO95447 670 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 SYF2O95926 243 aaKnown RBP4.79□□□□□ -1.64
CCNB3-208ENST00000493507 IFNA2P01563 188 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 IL1BP01584 269 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 UGT2B4P06133 528 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 TPM2P07951 284 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 CKMT1AP12532 417 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 OR1E1P30953 314 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 CHRNA3P32297 505 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 CA5AP35218 305 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 EIF2S3P41091 472 aaKnown RBP4.79□□□□□ -1.64
CCNB3-208ENST00000493507 DPP6P42658 865 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 TPI1P60174 286 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 MAXP61244 160 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 SLC10A7Q0GE19 358 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 TRAF2Q12933 501 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 ZBTB17Q13105 803 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 ZNF177Q13360 481 aaPredicted RBP4.79□□□□□ -1.64
CCNB3-208ENST00000493507 ELAVL3Q14576 367 aaKnown RBP4.79□□□□□ -1.64
CCNB3-208ENST00000493507 SLC18A3Q16572 532 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 PPP6R3Q5H9R7 873 aaPredicted RBP4.79□□□□□ -1.64
CCNB3-208ENST00000493507 CCDC122Q5T0U0 273 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 SPECC1LQ69YQ0 1117 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 COLCA1Q6ZS62 124 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 BBS12Q6ZW61 710 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 CAMK1DQ8IU85 385 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 PLD5Q8N7P1 536 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 ANKRD20A12PQ8NF67 263 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 ZNF564Q8TBZ8 553 aaPredicted RBP4.79□□□□□ -1.64
CCNB3-208ENST00000493507 SCARB1Q8WTV0 552 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 FAR1Q8WVX9 515 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 KRT35Q92764 455 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 RNFT2Q96EX2 444 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 VCPIP1Q96JH7 1222 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 BMFQ96LC9 184 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 ZNF48Q96MX3 618 aaPredicted RBP4.79□□□□□ -1.64
CCNB3-208ENST00000493507 DDX50Q9BQ39 737 aaKnown RBP4.79□□□□□ -1.64
CCNB3-208ENST00000493507 TRIM62Q9BVG3 475 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 CTDSP1Q9GZU7 261 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 PRORYQ9H606 182 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 ZDHHC6Q9H6R6 413 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 NHEJ1Q9H9Q4 299 aaPredicted RBP4.79□□□□□ -1.64
CCNB3-208ENST00000493507 MBNL1Q9NR56 388 aaKnown RBP4.79□□□□□ -1.64
CCNB3-208ENST00000493507 FADS3Q9Y5Q0 445 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 ITPR1Q14643 2758 aa4.79□□□□□ -1.64
CCNB3-208ENST00000493507 KNTC1P50748 2209 aa4.78□□□□□ -1.64
CCNB3-208ENST00000493507 TYW5A2RUC4 315 aaKnown RBP4.78□□□□□ -1.64
CCNB3-208ENST00000493507 GOLGA6L19H0YKK7 550 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms