RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 HMBOX1Q6NT76 420 aa13.46□□□□□ -0.25
PTPN7-216ENST00000492977 IKBIPQ70UQ0 350 aa13.46□□□□□ -0.25
PTPN7-216ENST00000492977 SLC9B2Q86UD5 537 aa13.46□□□□□ -0.25
PTPN7-216ENST00000492977 MICU2Q8IYU8 434 aa13.46□□□□□ -0.25
PTPN7-216ENST00000492977 TMEM145Q8NBT3 493 aa13.46□□□□□ -0.25
PTPN7-216ENST00000492977 TTLQ8NG68 377 aa13.46□□□□□ -0.25
PTPN7-216ENST00000492977 OR2A1Q8NGT9 310 aa13.46□□□□□ -0.25
PTPN7-216ENST00000492977 WDR48Q8TAF3 677 aa13.46□□□□□ -0.25
PTPN7-216ENST00000492977 C16orf78Q8WTQ4 265 aa13.46□□□□□ -0.25
PTPN7-216ENST00000492977 SNX19Q92543 992 aa13.46□□□□□ -0.25
PTPN7-216ENST00000492977 MIEF2Q96C03 454 aa13.46□□□□□ -0.25
PTPN7-216ENST00000492977 MTERF3Q96E29 417 aa13.46□□□□□ -0.25
PTPN7-216ENST00000492977 BHLHE41Q9C0J9 482 aaPredicted RBP13.46□□□□□ -0.25
PTPN7-216ENST00000492977 XKR8Q9H6D3 395 aa13.46□□□□□ -0.25
PTPN7-216ENST00000492977 BATF3Q9NR55 127 aa13.46□□□□□ -0.25
PTPN7-216ENST00000492977 AGPAT4Q9NRZ5 378 aa13.46□□□□□ -0.25
PTPN7-216ENST00000492977 ATAD3AQ9NVI7 634 aa13.46□□□□□ -0.25
PTPN7-216ENST00000492977 TRNAU1APQ9NX07 287 aaKnown RBP13.46□□□□□ -0.25
PTPN7-216ENST00000492977 TBC1D29Q9UFV1 150 aa13.46□□□□□ -0.25
PTPN7-216ENST00000492977 ICKQ9UPZ9 632 aa13.46□□□□□ -0.25
PTPN7-216ENST00000492977 SAP18O00422 153 aaKnown RBP13.45□□□□□ -0.26
PTPN7-216ENST00000492977 RNASET2O00584 256 aaKnown RBP13.45□□□□□ -0.26
PTPN7-216ENST00000492977 PRICKLE3O43900 615 aaPredicted RBP13.45□□□□□ -0.26
PTPN7-216ENST00000492977 EPN2O95208 641 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 CCNDBP1O95273 360 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 KLK1P06870 262 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 SOX11P35716 441 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 NUDT1P36639 197 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 RABIFP47224 123 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 SRP54P61011 504 aaKnown RBP13.45□□□□□ -0.26
PTPN7-216ENST00000492977 CSNK1G2P78368 415 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 PDE7AQ13946 482 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 TMEM31Q5JXX7 168 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 TPRG1LQ5T0D9 272 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 KIAA0895LQ68EN5 471 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 FAM71E1Q6IPT2 247 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 Q6ZS52 159 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 PAGE2Q7Z2X7 111 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 AMIGO2Q86SJ2 522 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 SERPINA11Q86U17 422 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 ANKRD53Q8N9V6 530 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 FLCNQ8NFG4 579 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 TSACCQ96A04 125 aaPredicted RBP13.45□□□□□ -0.26
PTPN7-216ENST00000492977 CENPNQ96H22 339 aaPredicted RBP13.45□□□□□ -0.26
PTPN7-216ENST00000492977 REXO5Q96IC2 774 aaKnown RBP13.45□□□□□ -0.26
PTPN7-216ENST00000492977 QRFPRQ96P65 431 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 MS4A8Q9BY19 250 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 SEMA6AQ9H2E6 1030 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 Q9H521 79 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 SCHIP1Q9P0W5 487 aaPredicted RBP13.45□□□□□ -0.26
PTPN7-216ENST00000492977 RAB26Q9ULW5 256 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 EXO1Q9UQ84 846 aaKnown RBP13.45□□□□□ -0.26
PTPN7-216ENST00000492977 DMTF1Q9Y222 760 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 BTBD3Q9Y2F9 522 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.45□□□□□ -0.26
PTPN7-216ENST00000492977 GMEB1Q9Y692 573 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 SZT2Q5T011 3432 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 TRBC2A0A5B9 178 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 CLIC1O00299 241 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 CXCR6O00574 342 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 KLHL18O94889 574 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 B3GALT4O96024 378 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 RETP07949 1114 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 FURINP09958 794 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 ZNF26P17031 533 aaPredicted RBP13.45□□□□□ -0.26
PTPN7-216ENST00000492977 HOXB6P17509 224 aaKnown RBP13.45□□□□□ -0.26
PTPN7-216ENST00000492977 GPX2P18283 190 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 PPIBP23284 216 aaKnown RBP13.45□□□□□ -0.26
PTPN7-216ENST00000492977 GSTM2P28161 218 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 SHMT2P34897 504 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 TFF2Q03403 129 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 MED21Q13503 144 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 LRRC32Q14392 662 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 Q6ZSR6 202 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 ZNF621Q6ZSS3 439 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 RD3Q7Z3Z2 195 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 ABI3BPQ7Z7G0 1075 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 PHACTR4Q8IZ21 702 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 ZNF687Q8N1G0 1237 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 FIG4Q92562 907 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 HLA-CQ95604 372 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 AURKBQ96GD4 344 aaPredicted RBP13.45□□□□□ -0.26
PTPN7-216ENST00000492977 CENPKQ9BS16 269 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 UGT2B28Q9BY64 529 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 C6orf106Q9H6K1 298 aaPredicted RBP13.45□□□□□ -0.26
PTPN7-216ENST00000492977 MRPS30Q9NP92 439 aaKnown RBP13.45□□□□□ -0.26
PTPN7-216ENST00000492977 TMEM184CQ9NVA4 438 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 OR6C2Q9NZP2 312 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 SH3BP4Q9P0V3 963 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 DUSP12Q9UNI6 340 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 DGKBQ9Y6T7 804 aa13.45□□□□□ -0.26
PTPN7-216ENST00000492977 IGKV1-8A0A0C4DH67 115 aa13.44□□□□□ -0.26
PTPN7-216ENST00000492977 FEZF1A0PJY2 475 aa13.44□□□□□ -0.26
PTPN7-216ENST00000492977 PLPP1O14494 284 aa13.44□□□□□ -0.26
PTPN7-216ENST00000492977 SCAMP1O15126 338 aa13.44□□□□□ -0.26
PTPN7-216ENST00000492977 YY2O15391 372 aa13.44□□□□□ -0.26
PTPN7-216ENST00000492977 DENRO43583 198 aaKnown RBP13.44□□□□□ -0.26
PTPN7-216ENST00000492977 OR1F1O43749 312 aa13.44□□□□□ -0.26
PTPN7-216ENST00000492977 CLEC3AO75596 197 aa13.44□□□□□ -0.26
PTPN7-216ENST00000492977 RASGRP1O95267 797 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms