RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 DSG2Q14126 1118 aa13.27□□□□□ -0.29
CCM2-217ENST00000492883 HERC3Q15034 1050 aa13.27□□□□□ -0.29
CCM2-217ENST00000492883 TOR1AIP1Q5JTV8 583 aa13.27□□□□□ -0.29
CCM2-217ENST00000492883 BEND6Q5SZJ8 279 aaPredicted RBP13.27□□□□□ -0.29
CCM2-217ENST00000492883 FAM69BQ5VUD6 431 aa13.27□□□□□ -0.29
CCM2-217ENST00000492883 LIPJQ5W064 366 aa13.27□□□□□ -0.29
CCM2-217ENST00000492883 MRPL14Q6P1L8 145 aaKnown RBP13.27□□□□□ -0.29
CCM2-217ENST00000492883 COX15Q7KZN9 410 aa13.27□□□□□ -0.29
CCM2-217ENST00000492883 ABHD13Q7L211 337 aa13.27□□□□□ -0.29
CCM2-217ENST00000492883 CROCCP2Q86T23 111 aa13.27□□□□□ -0.29
CCM2-217ENST00000492883 CREB3L4Q8TEY5 395 aa13.27□□□□□ -0.29
CCM2-217ENST00000492883 ZBTB9Q96C00 473 aa13.27□□□□□ -0.29
CCM2-217ENST00000492883 ZIM3Q96PE6 472 aa13.27□□□□□ -0.29
CCM2-217ENST00000492883 SMC6Q96SB8 1091 aa13.27□□□□□ -0.29
CCM2-217ENST00000492883 ERVK-6Q9BXR3 956 aa13.27□□□□□ -0.29
CCM2-217ENST00000492883 SEMA4BQ9NPR2 832 aaPredicted RBP13.27□□□□□ -0.29
CCM2-217ENST00000492883 COPG2Q9UBF2 871 aa13.27□□□□□ -0.29
CCM2-217ENST00000492883 ZNF282Q9UDV7 671 aaPredicted RBP13.27□□□□□ -0.29
CCM2-217ENST00000492883 PCTPQ9UKL6 214 aa13.27□□□□□ -0.29
CCM2-217ENST00000492883 EMCNQ9ULC0 261 aa13.27□□□□□ -0.29
CCM2-217ENST00000492883 ADAMTS20P59510 1910 aa13.27□□□□□ -0.29
CCM2-217ENST00000492883 SGK494L7N484 410 aa13.26□□□□□ -0.29
CCM2-217ENST00000492883 OR7A17O14581 309 aa13.26□□□□□ -0.29
CCM2-217ENST00000492883 PLIN3O60664 434 aa13.26□□□□□ -0.29
CCM2-217ENST00000492883 UGDHO60701 494 aa13.26□□□□□ -0.29
CCM2-217ENST00000492883 CLEC3AO75596 197 aa13.26□□□□□ -0.29
CCM2-217ENST00000492883 KLF7O75840 302 aaPredicted RBP13.26□□□□□ -0.29
CCM2-217ENST00000492883 KLHL18O94889 574 aa13.26□□□□□ -0.29
CCM2-217ENST00000492883 NSA2O95478 260 aaKnown RBP13.26□□□□□ -0.29
CCM2-217ENST00000492883 CLDN9O95484 217 aa13.26□□□□□ -0.29
CCM2-217ENST00000492883 PROCP04070 461 aa13.26□□□□□ -0.29
CCM2-217ENST00000492883 ZNF888P0CJ79 500 aaPredicted RBP13.26□□□□□ -0.29
CCM2-217ENST00000492883 ALOX12P18054 663 aa13.26□□□□□ -0.29
CCM2-217ENST00000492883 IMPDH1P20839 514 aa13.26□□□□□ -0.29
CCM2-217ENST00000492883 HPDP32754 393 aaPredicted RBP13.26□□□□□ -0.29
CCM2-217ENST00000492883 PRKAA2P54646 552 aa13.26□□□□□ -0.29
CCM2-217ENST00000492883 CDH13P55290 713 aa13.26□□□□□ -0.29
CCM2-217ENST00000492883 RAB8AP61006 207 aa13.26□□□□□ -0.29
CCM2-217ENST00000492883 SKP1P63208 163 aa13.26□□□□□ -0.29
CCM2-217ENST00000492883 E2F2Q14209 437 aa13.26□□□□□ -0.29
CCM2-217ENST00000492883 SSPNQ14714 243 aa13.26□□□□□ -0.29
CCM2-217ENST00000492883 RBBP7Q16576 425 aa13.26□□□□□ -0.29
CCM2-217ENST00000492883 NKG7Q16617 165 aa13.26□□□□□ -0.29
CCM2-217ENST00000492883 CPSF6Q16630 551 aaKnown RBP eCLIP13.26□□□□□ -0.29
CCM2-217ENST00000492883 UGT8Q16880 541 aa13.26□□□□□ -0.29
CCM2-217ENST00000492883 DEFB134Q4QY38 66 aa13.26□□□□□ -0.29
CCM2-217ENST00000492883 CRTC2Q53ET0 693 aaPredicted RBP13.26□□□□□ -0.29
CCM2-217ENST00000492883 ATP1A1-AS1Q5TC04 95 aa13.26□□□□□ -0.29
CCM2-217ENST00000492883 GRHL2Q6ISB3 625 aa13.26□□□□□ -0.29
CCM2-217ENST00000492883 LRIG3Q6UXM1 1119 aa13.26□□□□□ -0.29
CCM2-217ENST00000492883 ZYG11AQ6WRX3 759 aa13.26□□□□□ -0.29
CCM2-217ENST00000492883 MILR1Q7Z6M3 343 aa13.26□□□□□ -0.29
CCM2-217ENST00000492883 LAS2Q8IYD9 372 aa13.26□□□□□ -0.29
CCM2-217ENST00000492883 BANPQ8N9N5 519 aa13.26□□□□□ -0.29
CCM2-217ENST00000492883 OR7G3Q8NG95 312 aa13.26□□□□□ -0.29
CCM2-217ENST00000492883 OR2Y1Q8NGV0 311 aa13.26□□□□□ -0.29
CCM2-217ENST00000492883 UTP15Q8TED0 518 aaKnown RBP13.26□□□□□ -0.29
CCM2-217ENST00000492883 MIEF2Q96C03 454 aa13.26□□□□□ -0.29
CCM2-217ENST00000492883 CCDC126Q96EE4 140 aa13.26□□□□□ -0.29
CCM2-217ENST00000492883 NSUN5Q96P11 429 aaKnown RBP13.26□□□□□ -0.29
CCM2-217ENST00000492883 CATSPER2Q96P56 530 aa13.26□□□□□ -0.29
CCM2-217ENST00000492883 CDK15Q96Q40 435 aa13.26□□□□□ -0.29
CCM2-217ENST00000492883 SLC6A16Q9GZN6 736 aa13.26□□□□□ -0.29
CCM2-217ENST00000492883 RHBGQ9H310 441 aa13.26□□□□□ -0.29
CCM2-217ENST00000492883 C12orf65Q9H3J6 166 aaKnown RBP13.26□□□□□ -0.29
CCM2-217ENST00000492883 KLHL31Q9H511 634 aa13.26□□□□□ -0.29
CCM2-217ENST00000492883 WDR54Q9H977 334 aa13.26□□□□□ -0.29
CCM2-217ENST00000492883 CTSFQ9UBX1 484 aa13.26□□□□□ -0.29
CCM2-217ENST00000492883 NXT1Q9UKK6 140 aaKnown RBP13.26□□□□□ -0.29
CCM2-217ENST00000492883 RNF11Q9Y3C5 154 aa13.26□□□□□ -0.29
CCM2-217ENST00000492883 NAALAD2Q9Y3Q0 740 aa13.26□□□□□ -0.29
CCM2-217ENST00000492883 MAP4K5Q9Y4K4 846 aa13.26□□□□□ -0.29
CCM2-217ENST00000492883 PCDHGA11Q9Y5H2 935 aa13.26□□□□□ -0.29
CCM2-217ENST00000492883 URB1O60287 2271 aaKnown RBP13.25□□□□□ -0.29
CCM2-217ENST00000492883 SDK2Q58EX2 2172 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 LRIT2A6NDA9 550 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 G3V2L1 256 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 FFAR3O14843 346 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 GPR42O15529 346 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 CNOT3O75175 753 aaKnown RBP13.25□□□□□ -0.29
CCM2-217ENST00000492883 SPAG7O75391 227 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 OTCP00480 354 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 RPS17P08708 135 aaKnown RBP13.25□□□□□ -0.29
CCM2-217ENST00000492883 CPA3P15088 417 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 TSPAN8P19075 237 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 OTX2P32243 289 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 FOXL2P58012 376 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 SNRPNP63162 240 aaKnown RBP13.25□□□□□ -0.29
CCM2-217ENST00000492883 MAT1AQ00266 395 aaKnown RBP13.25□□□□□ -0.29
CCM2-217ENST00000492883 RHDQ02161 417 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 CLCQ05315 142 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 HYAL2Q12891 473 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 IL10RAQ13651 578 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 SYT16Q17RD7 645 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 DEFB109BQ30KR1 87 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 UNC50Q53HI1 259 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 VWA2Q5GFL6 755 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 ZNF678Q5SXM1 525 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 TTC19Q6DKK2 380 aaPredicted RBP13.25□□□□□ -0.29
CCM2-217ENST00000492883 ADNP2Q6IQ32 1131 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms