RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 EFTUD2Q15029 972 aaKnown RBP eCLIP3.46□□□□□ -1.86
CLK1-213ENST00000492793 DUSP5Q16690 384 aa3.46□□□□□ -1.86
CLK1-213ENST00000492793 KBTBD12Q3ZCT8 623 aa3.46□□□□□ -1.86
CLK1-213ENST00000492793 ARMCX4Q5H9R4 360 aa3.46□□□□□ -1.86
CLK1-213ENST00000492793 GLRA4Q5JXX5 417 aa3.46□□□□□ -1.86
CLK1-213ENST00000492793 LRRC38Q5VT99 294 aa3.46□□□□□ -1.86
CLK1-213ENST00000492793 PM20D1Q6GTS8 502 aa3.46□□□□□ -1.86
CLK1-213ENST00000492793 DHRS11Q6UWP2 260 aa3.46□□□□□ -1.86
CLK1-213ENST00000492793 LEKR1Q6ZMV7 388 aa3.46□□□□□ -1.86
CLK1-213ENST00000492793 KCTD9Q7L273 389 aa3.46□□□□□ -1.86
CLK1-213ENST00000492793 GPR141Q7Z602 305 aa3.46□□□□□ -1.86
CLK1-213ENST00000492793 UNC45BQ8IWX7 931 aa3.46□□□□□ -1.86
CLK1-213ENST00000492793 AQP12AQ8IXF9 295 aa3.46□□□□□ -1.86
CLK1-213ENST00000492793 DCLK2Q8N568 766 aa3.46□□□□□ -1.86
CLK1-213ENST00000492793 C10orf53Q8N6V4 93 aa3.46□□□□□ -1.86
CLK1-213ENST00000492793 RFT1Q96AA3 541 aa3.46□□□□□ -1.86
CLK1-213ENST00000492793 CDKN2AIPNLQ96HQ2 116 aa3.46□□□□□ -1.86
CLK1-213ENST00000492793 C2orf48Q96LS8 159 aa3.46□□□□□ -1.86
CLK1-213ENST00000492793 ZNF559Q9BR84 538 aa3.46□□□□□ -1.86
CLK1-213ENST00000492793 TDRD1Q9BXT4 1180 aaKnown RBP3.46□□□□□ -1.86
CLK1-213ENST00000492793 SLC39A8Q9C0K1 460 aa3.46□□□□□ -1.86
CLK1-213ENST00000492793 SLC5A7Q9GZV3 580 aa3.46□□□□□ -1.86
CLK1-213ENST00000492793 UBQLN3Q9H347 655 aa3.46□□□□□ -1.86
CLK1-213ENST00000492793 IARS2Q9NSE4 1012 aaKnown RBP3.46□□□□□ -1.86
CLK1-213ENST00000492793 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.46□□□□□ -1.86
CLK1-213ENST00000492793 EXOC1Q9NV70 894 aa3.46□□□□□ -1.86
CLK1-213ENST00000492793 PANK4Q9NVE7 773 aa3.46□□□□□ -1.86
CLK1-213ENST00000492793 C2orf42Q9NWW7 574 aa3.46□□□□□ -1.86
CLK1-213ENST00000492793 SLCO1C1Q9NYB5 712 aa3.46□□□□□ -1.86
CLK1-213ENST00000492793 GPR132Q9UNW8 380 aa3.46□□□□□ -1.86
CLK1-213ENST00000492793 LIPT1Q9Y234 373 aa3.46□□□□□ -1.86
CLK1-213ENST00000492793 C13orf42A0A1B0GVH6 325 aa3.45□□□□□ -1.86
CLK1-213ENST00000492793 CCDC162PA2VCL2 907 aa3.45□□□□□ -1.86
CLK1-213ENST00000492793 SMIM30A4D0T7 59 aa3.45□□□□□ -1.86
CLK1-213ENST00000492793 LRRD1A4D1F6 860 aa3.45□□□□□ -1.86
CLK1-213ENST00000492793 ACSL4O60488 711 aa3.45□□□□□ -1.86
CLK1-213ENST00000492793 ATP9AO75110 1047 aa3.45□□□□□ -1.86
CLK1-213ENST00000492793 NME6O75414 186 aaPredicted RBP3.45□□□□□ -1.86
CLK1-213ENST00000492793 KHDRBS3O75525 346 aaKnown RBP3.45□□□□□ -1.86
CLK1-213ENST00000492793 GRAP2O75791 330 aa3.45□□□□□ -1.86
CLK1-213ENST00000492793 KRT33AO76009 404 aa3.45□□□□□ -1.86
CLK1-213ENST00000492793 GLCEO94923 617 aa3.45□□□□□ -1.86
CLK1-213ENST00000492793 SLC16A8O95907 504 aa3.45□□□□□ -1.86
CLK1-213ENST00000492793 MT-ND2P03891 347 aa3.45□□□□□ -1.86
CLK1-213ENST00000492793 SBK2P0C263 348 aa3.45□□□□□ -1.86
CLK1-213ENST00000492793 CTNNA2P26232 953 aa3.45□□□□□ -1.86
CLK1-213ENST00000492793 OAS2P29728 719 aaKnown RBP3.45□□□□□ -1.86
CLK1-213ENST00000492793 COPB2P35606 906 aa3.45□□□□□ -1.86
CLK1-213ENST00000492793 SLC1A3P43003 542 aa3.45□□□□□ -1.86
CLK1-213ENST00000492793 OR3A1P47881 315 aa3.45□□□□□ -1.86
CLK1-213ENST00000492793 OR3A3P47888 321 aa3.45□□□□□ -1.86
CLK1-213ENST00000492793 OR3A2P47893 321 aa3.45□□□□□ -1.86
CLK1-213ENST00000492793 NME5P56597 212 aa3.45□□□□□ -1.86
CLK1-213ENST00000492793 STX1BP61266 288 aa3.45□□□□□ -1.86
CLK1-213ENST00000492793 ASIC1P78348 528 aa3.45□□□□□ -1.86
CLK1-213ENST00000492793 GUCY2DQ02846 1103 aa3.45□□□□□ -1.86
CLK1-213ENST00000492793 PPA1Q15181 289 aa3.45□□□□□ -1.86
CLK1-213ENST00000492793 ACKR1Q16570 336 aa3.45□□□□□ -1.86
CLK1-213ENST00000492793 LRRC37A5PQ49AS3 106 aa3.45□□□□□ -1.86
CLK1-213ENST00000492793 IFI44LQ53G44 452 aa3.45□□□□□ -1.86
CLK1-213ENST00000492793 CES4AQ5XG92 561 aa3.45□□□□□ -1.86
CLK1-213ENST00000492793 MSANTD4Q8NCY6 345 aa3.45□□□□□ -1.86
CLK1-213ENST00000492793 OR5T2Q8NGG2 359 aa3.45□□□□□ -1.86
CLK1-213ENST00000492793 OR4D10Q8NGI6 311 aa3.45□□□□□ -1.86
CLK1-213ENST00000492793 GATAD1Q8WUU5 269 aa3.45□□□□□ -1.86
CLK1-213ENST00000492793 ZNRF4Q8WWF5 429 aa3.45□□□□□ -1.86
CLK1-213ENST00000492793 NR4A3Q92570 626 aa3.45□□□□□ -1.86
CLK1-213ENST00000492793 USP28Q96RU2 1077 aa3.45□□□□□ -1.86
CLK1-213ENST00000492793 IL12RB2Q99665 862 aa3.45□□□□□ -1.86
CLK1-213ENST00000492793 CACNG6Q9BXT2 260 aa3.45□□□□□ -1.86
CLK1-213ENST00000492793 B3GAT2Q9NPZ5 323 aa3.45□□□□□ -1.86
CLK1-213ENST00000492793 TRPC4Q9UBN4 977 aa3.45□□□□□ -1.86
CLK1-213ENST00000492793 LEF1Q9UJU2 399 aaPredicted RBP3.45□□□□□ -1.86
CLK1-213ENST00000492793 PILRBQ9UKJ0 227 aa3.45□□□□□ -1.86
CLK1-213ENST00000492793 SATB2Q9UPW6 733 aa3.45□□□□□ -1.86
CLK1-213ENST00000492793 EXOGQ9Y2C4 368 aaKnown RBP3.45□□□□□ -1.86
CLK1-213ENST00000492793 CSNK1G3Q9Y6M4 447 aa3.45□□□□□ -1.86
CLK1-213ENST00000492793 A0A087WZ39 114 aa3.44□□□□□ -1.86
CLK1-213ENST00000492793 A0A0B4J203 849 aa3.44□□□□□ -1.86
CLK1-213ENST00000492793 C2orf92A0A1B0GVN3 265 aa3.44□□□□□ -1.86
CLK1-213ENST00000492793 MTMR11A4FU01 709 aa3.44□□□□□ -1.86
CLK1-213ENST00000492793 ANTXRLA6NF34 631 aa3.44□□□□□ -1.86
CLK1-213ENST00000492793 C15orf61A6NNL5 157 aa3.44□□□□□ -1.86
CLK1-213ENST00000492793 PI4K2BG5E9Z4 385 aa3.44□□□□□ -1.86
CLK1-213ENST00000492793 SCO2O43819 266 aa3.44□□□□□ -1.86
CLK1-213ENST00000492793 FMO6PO60774 539 aa3.44□□□□□ -1.86
CLK1-213ENST00000492793 SAP30O75446 220 aa3.44□□□□□ -1.86
CLK1-213ENST00000492793 DUS4LO95620 317 aaKnown RBP3.44□□□□□ -1.86
CLK1-213ENST00000492793 VTNP04004 478 aa3.44□□□□□ -1.86
CLK1-213ENST00000492793 UROSP10746 265 aa3.44□□□□□ -1.86
CLK1-213ENST00000492793 PRKACGP22612 351 aa3.44□□□□□ -1.86
CLK1-213ENST00000492793 HLA-FP30511 346 aa3.44□□□□□ -1.86
CLK1-213ENST00000492793 MAGEB1P43366 347 aa3.44□□□□□ -1.86
CLK1-213ENST00000492793 IER3P46695 156 aa3.44□□□□□ -1.86
CLK1-213ENST00000492793 BTG1P62324 171 aa3.44□□□□□ -1.86
CLK1-213ENST00000492793 CSNK2BP67870 215 aa3.44□□□□□ -1.86
CLK1-213ENST00000492793 PMP22Q01453 160 aa3.44□□□□□ -1.86
CLK1-213ENST00000492793 DRP2Q13474 957 aa3.44□□□□□ -1.86
CLK1-213ENST00000492793 ATP1A1-AS1Q5TC04 95 aa3.44□□□□□ -1.86
CLK1-213ENST00000492793 ADAM5Q6NVV9 412 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms