RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 EMX2Q04743 252 aa21.05■□□□□ 0.96
PSPC1-204ENST00000492741 CUL3Q13618 768 aa21.05■□□□□ 0.96
PSPC1-204ENST00000492741 DEPDC1Q5TB30 811 aa21.05■□□□□ 0.96
PSPC1-204ENST00000492741 OGFOD2Q6N063 350 aa21.05■□□□□ 0.96
PSPC1-204ENST00000492741 PRSS42Q7Z5A4 293 aa21.05■□□□□ 0.96
PSPC1-204ENST00000492741 MCATQ8IVS2 390 aaKnown RBP21.05■□□□□ 0.96
PSPC1-204ENST00000492741 OR4N4Q8N0Y3 316 aa21.05■□□□□ 0.96
PSPC1-204ENST00000492741 ZNF655Q8N720 491 aaPredicted RBP21.05■□□□□ 0.96
PSPC1-204ENST00000492741 CAMKVQ8NCB2 501 aa21.05■□□□□ 0.96
PSPC1-204ENST00000492741 REXO4Q9GZR2 422 aaKnown RBP21.05■□□□□ 0.96
PSPC1-204ENST00000492741 UNC13CQ8NB66 2214 aa21.05■□□□□ 0.96
PSPC1-204ENST00000492741 MYO1DO94832 1006 aa21.04■□□□□ 0.96
PSPC1-204ENST00000492741 ALDOCP09972 364 aaKnown RBP21.04■□□□□ 0.96
PSPC1-204ENST00000492741 PRPH2P23942 346 aa21.04■□□□□ 0.96
PSPC1-204ENST00000492741 VSX2P58304 361 aaPredicted RBP21.04■□□□□ 0.96
PSPC1-204ENST00000492741 STX1BP61266 288 aa21.04■□□□□ 0.96
PSPC1-204ENST00000492741 STXBP1P61764 594 aaKnown RBP21.04■□□□□ 0.96
PSPC1-204ENST00000492741 SPIDRQ14159 915 aa21.04■□□□□ 0.96
PSPC1-204ENST00000492741 SMU1Q2TAY7 513 aa21.04■□□□□ 0.96
PSPC1-204ENST00000492741 SPIN4Q56A73 249 aa21.04■□□□□ 0.96
PSPC1-204ENST00000492741 IL23RQ5VWK5 629 aa21.04■□□□□ 0.96
PSPC1-204ENST00000492741 ZNF574Q6ZN55 896 aaPredicted RBP21.04■□□□□ 0.96
PSPC1-204ENST00000492741 TMPRSS9Q7Z410 1059 aa21.04■□□□□ 0.96
PSPC1-204ENST00000492741 VN1R4Q7Z5H5 301 aa21.04■□□□□ 0.96
PSPC1-204ENST00000492741 C1orf52Q8N6N3 182 aaKnown RBP21.04■□□□□ 0.96
PSPC1-204ENST00000492741 IRAK4Q9NWZ3 460 aa21.04■□□□□ 0.96
PSPC1-204ENST00000492741 NOP53Q9NZM5 478 aaKnown RBP21.04■□□□□ 0.96
PSPC1-204ENST00000492741 TMED5Q9Y3A6 229 aa21.04■□□□□ 0.96
PSPC1-204ENST00000492741 POLR3HQ9Y535 204 aaPredicted RBP21.04■□□□□ 0.96
PSPC1-204ENST00000492741 WDR87Q6ZQQ6 2873 aa21.04■□□□□ 0.96
PSPC1-204ENST00000492741 LRIT2A6NDA9 550 aa21.04■□□□□ 0.96
PSPC1-204ENST00000492741 TOX3O15405 576 aaPredicted RBP21.04■□□□□ 0.96
PSPC1-204ENST00000492741 CBFA2T3O75081 653 aa21.04■□□□□ 0.96
PSPC1-204ENST00000492741 PWP1Q13610 501 aa21.04■□□□□ 0.96
PSPC1-204ENST00000492741 TOR1AIP1Q5JTV8 583 aa21.04■□□□□ 0.96
PSPC1-204ENST00000492741 TMTC4Q5T4D3 741 aa21.04■□□□□ 0.96
PSPC1-204ENST00000492741 TRPM8Q7Z2W7 1104 aa21.04■□□□□ 0.96
PSPC1-204ENST00000492741 DNAJC22Q8N4W6 341 aa21.04■□□□□ 0.96
PSPC1-204ENST00000492741 CHTF18Q8WVB6 975 aa21.04■□□□□ 0.96
PSPC1-204ENST00000492741 ERP27Q96DN0 273 aa21.04■□□□□ 0.96
PSPC1-204ENST00000492741 PHOX2BQ99453 314 aa21.04■□□□□ 0.96
PSPC1-204ENST00000492741 NLNQ9BYT8 704 aa21.04■□□□□ 0.96
PSPC1-204ENST00000492741 SYNPO2LQ9H987 977 aa21.04■□□□□ 0.96
PSPC1-204ENST00000492741 SAR1AQ9NR31 198 aa21.04■□□□□ 0.96
PSPC1-204ENST00000492741 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.03■□□□□ 0.96
PSPC1-204ENST00000492741 NPIPB8E9PQR5 432 aa21.03■□□□□ 0.96
PSPC1-204ENST00000492741 TBX6O95947 436 aaPredicted RBP21.03■□□□□ 0.96
PSPC1-204ENST00000492741 IDO1P14902 403 aa21.03■□□□□ 0.96
PSPC1-204ENST00000492741 MAPK1P28482 360 aa21.03■□□□□ 0.96
PSPC1-204ENST00000492741 HNRNPH1P31943 449 aaKnown RBP21.03■□□□□ 0.96
PSPC1-204ENST00000492741 PLA2G16P53816 162 aa21.03■□□□□ 0.96
PSPC1-204ENST00000492741 DIO3P55073 304 aa21.03■□□□□ 0.96
PSPC1-204ENST00000492741 TBL3Q12788 808 aaKnown RBP21.03■□□□□ 0.96
PSPC1-204ENST00000492741 UBAP2LQ14157 1087 aaKnown RBP21.03■□□□□ 0.96
PSPC1-204ENST00000492741 CLPPQ16740 277 aaPredicted RBP21.03■□□□□ 0.96
PSPC1-204ENST00000492741 TMEM35AQ53FP2 167 aa21.03■□□□□ 0.96
PSPC1-204ENST00000492741 KMT5CQ86Y97 462 aa21.03■□□□□ 0.96
PSPC1-204ENST00000492741 RGMAQ96B86 450 aa21.03■□□□□ 0.96
PSPC1-204ENST00000492741 METTL2AQ96IZ6 378 aaKnown RBP21.03■□□□□ 0.96
PSPC1-204ENST00000492741 ARMCX1Q9P291 453 aa21.03■□□□□ 0.96
PSPC1-204ENST00000492741 PLCL2Q9UPR0 1127 aa21.03■□□□□ 0.96
PSPC1-204ENST00000492741 RUVBL1Q9Y265 456 aaKnown RBP21.03■□□□□ 0.96
PSPC1-204ENST00000492741 COL5A1P20908 1838 aaPredicted RBP21.03■□□□□ 0.96
PSPC1-204ENST00000492741 ASCC3Q8N3C0 2202 aaKnown RBP21.02■□□□□ 0.96
PSPC1-204ENST00000492741 IGHV5-10-1A0A0J9YXX1 117 aa21.02■□□□□ 0.96
PSPC1-204ENST00000492741 URADA6NGE7 173 aa21.02■□□□□ 0.96
PSPC1-204ENST00000492741 EBAG9O00559 213 aa21.02■□□□□ 0.96
PSPC1-204ENST00000492741 SRPX2O60687 465 aaPredicted RBP21.02■□□□□ 0.96
PSPC1-204ENST00000492741 ACADVLP49748 655 aa21.02■□□□□ 0.96
PSPC1-204ENST00000492741 KCNAB1Q14722 419 aa21.02■□□□□ 0.96
PSPC1-204ENST00000492741 KIAA0040Q15053 153 aa21.02■□□□□ 0.96
PSPC1-204ENST00000492741 GSTA3Q16772 222 aa21.02■□□□□ 0.96
PSPC1-204ENST00000492741 PHF19Q5T6S3 580 aa21.02■□□□□ 0.96
PSPC1-204ENST00000492741 NOXRED1Q6NXP6 359 aa21.02■□□□□ 0.96
PSPC1-204ENST00000492741 ASCL5Q7RTU5 278 aa21.02■□□□□ 0.96
PSPC1-204ENST00000492741 PARP9Q8IXQ6 854 aa21.02■□□□□ 0.96
PSPC1-204ENST00000492741 FITM2Q8N6M3 262 aa21.02■□□□□ 0.96
PSPC1-204ENST00000492741 CSNK1A1LQ8N752 337 aa21.02■□□□□ 0.96
PSPC1-204ENST00000492741 NT5CQ8TCD5 201 aa21.02■□□□□ 0.96
PSPC1-204ENST00000492741 TM4SF19Q96DZ7 209 aa21.02■□□□□ 0.96
PSPC1-204ENST00000492741 CHRNA10Q9GZZ6 450 aa21.02■□□□□ 0.96
PSPC1-204ENST00000492741 KLHL31Q9H511 634 aa21.02■□□□□ 0.96
PSPC1-204ENST00000492741 ZNF768Q9H5H4 540 aaKnown RBP21.02■□□□□ 0.96
PSPC1-204ENST00000492741 SEMA5BQ9P283 1151 aa21.02■□□□□ 0.96
PSPC1-204ENST00000492741 COPG1Q9Y678 874 aaKnown RBP21.02■□□□□ 0.96
PSPC1-204ENST00000492741 NTN3O00634 580 aaPredicted RBP21.01■□□□□ 0.95
PSPC1-204ENST00000492741 ERI3O43414 337 aaKnown RBP21.01■□□□□ 0.95
PSPC1-204ENST00000492741 HCRTR1O43613 425 aa21.01■□□□□ 0.95
PSPC1-204ENST00000492741 SEMA3DO95025 777 aa21.01■□□□□ 0.95
PSPC1-204ENST00000492741 NME5P56597 212 aa21.01■□□□□ 0.95
PSPC1-204ENST00000492741 TGM3Q08188 693 aa21.01■□□□□ 0.95
PSPC1-204ENST00000492741 TRIM40Q6P9F5 258 aa21.01■□□□□ 0.95
PSPC1-204ENST00000492741 COMMD6Q7Z4G1 85 aa21.01■□□□□ 0.95
PSPC1-204ENST00000492741 METTL4Q8N3J2 472 aa21.01■□□□□ 0.95
PSPC1-204ENST00000492741 KCT2Q8NC54 265 aa21.01■□□□□ 0.95
PSPC1-204ENST00000492741 RCBTB1Q8NDN9 531 aa21.01■□□□□ 0.95
PSPC1-204ENST00000492741 SRFBP1Q8NEF9 429 aaKnown RBP21.01■□□□□ 0.95
PSPC1-204ENST00000492741 WDR48Q8TAF3 677 aa21.01■□□□□ 0.95
PSPC1-204ENST00000492741 KLHL6Q8WZ60 621 aa21.01■□□□□ 0.95
PSPC1-204ENST00000492741 CCDC74BQ96LY2 380 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms