RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 POU2F1P14859 743 aa11.96□□□□□ -0.49
HMGN1-220ENST00000492280 GPX2P18283 190 aa11.96□□□□□ -0.49
HMGN1-220ENST00000492280 RRM2P31350 389 aa11.96□□□□□ -0.49
HMGN1-220ENST00000492280 PSMD7P51665 324 aa11.96□□□□□ -0.49
HMGN1-220ENST00000492280 SRSF11Q05519 484 aaKnown RBP11.96□□□□□ -0.49
HMGN1-220ENST00000492280 CDK5R2Q13319 367 aa11.96□□□□□ -0.49
HMGN1-220ENST00000492280 HMGN2P46Q86SG4 172 aa11.96□□□□□ -0.49
HMGN1-220ENST00000492280 SNX29P2Q8IUI4 249 aa11.96□□□□□ -0.49
HMGN1-220ENST00000492280 RASGRP3Q8IV61 690 aa11.96□□□□□ -0.49
HMGN1-220ENST00000492280 PIK3C3Q8NEB9 887 aa11.96□□□□□ -0.49
HMGN1-220ENST00000492280 TBC1D15Q8TC07 691 aa11.96□□□□□ -0.49
HMGN1-220ENST00000492280 KCNC2Q96PR1 638 aa11.96□□□□□ -0.49
HMGN1-220ENST00000492280 RUBCNLQ9H714 662 aa11.96□□□□□ -0.49
HMGN1-220ENST00000492280 RLIMQ9NVW2 624 aa11.96□□□□□ -0.49
HMGN1-220ENST00000492280 GALNT8Q9NY28 637 aa11.96□□□□□ -0.49
HMGN1-220ENST00000492280 USE1Q9NZ43 259 aa11.96□□□□□ -0.49
HMGN1-220ENST00000492280 SLC23A2Q9UGH3 650 aa11.96□□□□□ -0.49
HMGN1-220ENST00000492280 ASF1AQ9Y294 204 aa11.96□□□□□ -0.49
HMGN1-220ENST00000492280 ORC6Q9Y5N6 252 aa11.96□□□□□ -0.49
HMGN1-220ENST00000492280 CORINQ9Y5Q5 1042 aa11.96□□□□□ -0.49
HMGN1-220ENST00000492280 FEZF1A0PJY2 475 aa11.96□□□□□ -0.49
HMGN1-220ENST00000492280 C1orf226A1L170 272 aa11.96□□□□□ -0.49
HMGN1-220ENST00000492280 TMEM229AB2RXF0 380 aa11.96□□□□□ -0.49
HMGN1-220ENST00000492280 FAM227AF5H4B4 570 aa11.96□□□□□ -0.49
HMGN1-220ENST00000492280 PCCBP05166 539 aa11.96□□□□□ -0.49
HMGN1-220ENST00000492280 CALRP27797 417 aaKnown RBP11.96□□□□□ -0.49
HMGN1-220ENST00000492280 GP2P55259 537 aaKnown RBP11.96□□□□□ -0.49
HMGN1-220ENST00000492280 TAP2Q03519 686 aa11.96□□□□□ -0.49
HMGN1-220ENST00000492280 RGNQ15493 299 aa11.96□□□□□ -0.49
HMGN1-220ENST00000492280 C9orf64Q5T6V5 341 aa11.96□□□□□ -0.49
HMGN1-220ENST00000492280 MED27Q6P2C8 311 aa11.96□□□□□ -0.49
HMGN1-220ENST00000492280 SHQ1Q6PI26 577 aaKnown RBP11.96□□□□□ -0.49
HMGN1-220ENST00000492280 GPR155Q7Z3F1 870 aa11.96□□□□□ -0.49
HMGN1-220ENST00000492280 BTLAQ7Z6A9 289 aa11.96□□□□□ -0.49
HMGN1-220ENST00000492280 OR8J2Q8NGG1 315 aa11.96□□□□□ -0.49
HMGN1-220ENST00000492280 ZFP90Q8TF47 636 aa11.96□□□□□ -0.49
HMGN1-220ENST00000492280 SMG7Q92540 1137 aaKnown RBP11.96□□□□□ -0.49
HMGN1-220ENST00000492280 HDAC2Q92769 488 aaKnown RBP11.96□□□□□ -0.49
HMGN1-220ENST00000492280 OTUB1Q96FW1 271 aaPredicted RBP11.96□□□□□ -0.49
HMGN1-220ENST00000492280 FCRL1Q96LA6 429 aa11.96□□□□□ -0.49
HMGN1-220ENST00000492280 CUEDC1Q9NWM3 386 aaPredicted RBP11.96□□□□□ -0.49
HMGN1-220ENST00000492280 RHCGQ9UBD6 479 aa11.96□□□□□ -0.49
HMGN1-220ENST00000492280 BAG5Q9UL15 447 aa11.96□□□□□ -0.49
HMGN1-220ENST00000492280 GMPPBQ9Y5P6 360 aa11.96□□□□□ -0.49
HMGN1-220ENST00000492280 TSPAN11A1L157 253 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 LINC01553A4QN01 128 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 NOL3O60936 208 aaKnown RBP11.95□□□□□ -0.5
HMGN1-220ENST00000492280 C2orf80Q0P641 193 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 ZNF234Q14588 700 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 GANABQ14697 944 aaKnown RBP11.95□□□□□ -0.5
HMGN1-220ENST00000492280 CAPN13Q6MZZ7 669 aaPredicted RBP11.95□□□□□ -0.5
HMGN1-220ENST00000492280 OLIG3Q7RTU3 272 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 TSEN54Q7Z6J9 526 aaKnown RBP11.95□□□□□ -0.5
HMGN1-220ENST00000492280 KIAA0907Q7Z7F0 614 aaPredicted RBP11.95□□□□□ -0.5
HMGN1-220ENST00000492280 RNF130Q86XS8 419 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 HIPK1Q86Z02 1210 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 NLGN4XQ8N0W4 816 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 SYNPOQ8N3V7 929 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 TTC29Q8NA56 475 aaPredicted RBP11.95□□□□□ -0.5
HMGN1-220ENST00000492280 NFKBIDQ8NI38 313 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 UCN3Q969E3 161 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 COQ10AQ96MF6 247 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 NODALQ96S42 347 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 SLC35A5Q9BS91 424 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 MAGIXQ9H6Y5 334 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 KRT84Q9NSB2 600 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 FAM120CQ9NX05 1096 aaKnown RBP11.95□□□□□ -0.5
HMGN1-220ENST00000492280 SELENONQ9NZV5 590 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 SLC6A14Q9UN76 642 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 SNX11Q9Y5W9 270 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 SNX8Q9Y5X2 465 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 IRAK3Q9Y616 596 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 PRAMEF25A6NGN4 478 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 WASHC1A8K0Z3 465 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 PPM1DO15297 605 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 SEC14L2O76054 403 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 IL3P08700 152 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 ADRB3P13945 408 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 CCNA2P20248 432 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 MASP1P48740 699 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 TRPC1P48995 793 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 NUDT6P53370 316 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 RAD23AP54725 363 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 SH3BGRP55822 239 aaPredicted RBP11.95□□□□□ -0.5
HMGN1-220ENST00000492280 NUP107P57740 925 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 DMC1Q14565 340 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 FAM78AQ5JUQ0 283 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 GTF2IRD2BQ6EKJ0 949 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 GALNT18Q6P9A2 607 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 WASH2PQ6VEQ5 465 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 NEK10Q6ZWH5 1172 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 GET4Q7L5D6 327 aaPredicted RBP11.95□□□□□ -0.5
HMGN1-220ENST00000492280 GTF2IRD2Q86UP8 949 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 CHTF18Q8WVB6 975 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 ATL1Q8WXF7 558 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 VPS35Q96QK1 796 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 RAD9AQ99638 391 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 MACROD1Q9BQ69 325 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 DMRT3Q9NQL9 472 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 TAC3Q9UHF0 121 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms