RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 ZNF195O14628 629 aa17.77■□□□□ 0.44
MCF2L-230ENST00000491028 HCRTR1O43613 425 aa17.77■□□□□ 0.44
MCF2L-230ENST00000491028 RSL1D1O76021 490 aaKnown RBP17.77■□□□□ 0.44
MCF2L-230ENST00000491028 JUNP05412 331 aaKnown RBP17.77■□□□□ 0.44
MCF2L-230ENST00000491028 SERPIND1P05546 499 aa17.77■□□□□ 0.44
MCF2L-230ENST00000491028 LINC00032P0C843 101 aa17.77■□□□□ 0.44
MCF2L-230ENST00000491028 EIF3IQ13347 325 aaKnown RBP17.77■□□□□ 0.44
MCF2L-230ENST00000491028 CUL3Q13618 768 aa17.77■□□□□ 0.44
MCF2L-230ENST00000491028 GPR19Q15760 415 aa17.77■□□□□ 0.44
MCF2L-230ENST00000491028 PRTGQ2VWP7 1150 aa17.77■□□□□ 0.44
MCF2L-230ENST00000491028 ADPRMQ3LIE5 342 aa17.77■□□□□ 0.44
MCF2L-230ENST00000491028 TMEM35AQ53FP2 167 aa17.77■□□□□ 0.44
MCF2L-230ENST00000491028 DEPDC1Q5TB30 811 aa17.77■□□□□ 0.44
MCF2L-230ENST00000491028 CGB2Q6NT52 195 aa17.77■□□□□ 0.44
MCF2L-230ENST00000491028 SCIMPQ6UWF3 145 aa17.77■□□□□ 0.44
MCF2L-230ENST00000491028 CHSY3Q70JA7 882 aa17.77■□□□□ 0.44
MCF2L-230ENST00000491028 BPHLQ86WA6 291 aaPredicted RBP17.77■□□□□ 0.44
MCF2L-230ENST00000491028 TMPRSS12Q86WS5 348 aa17.77■□□□□ 0.44
MCF2L-230ENST00000491028 OR4N4Q8N0Y3 316 aa17.77■□□□□ 0.44
MCF2L-230ENST00000491028 RNF175Q8N4F7 328 aa17.77■□□□□ 0.44
MCF2L-230ENST00000491028 ADAMTS14Q8WXS8 1223 aa17.77■□□□□ 0.44
MCF2L-230ENST00000491028 ZNF501Q96CX3 271 aaPredicted RBP17.77■□□□□ 0.44
MCF2L-230ENST00000491028 HBEGFQ99075 208 aa17.77■□□□□ 0.44
MCF2L-230ENST00000491028 CENPKQ9BS16 269 aa17.77■□□□□ 0.44
MCF2L-230ENST00000491028 ACPTQ9BZG2 426 aa17.77■□□□□ 0.44
MCF2L-230ENST00000491028 EPN3Q9H201 632 aa17.77■□□□□ 0.44
MCF2L-230ENST00000491028 NPHS2Q9NP85 383 aa17.77■□□□□ 0.44
MCF2L-230ENST00000491028 CCL27Q9Y4X3 112 aa17.77■□□□□ 0.44
MCF2L-230ENST00000491028 FITM1A5D6W6 292 aa17.76■□□□□ 0.43
MCF2L-230ENST00000491028 EFCAB7A8K855 629 aa17.76■□□□□ 0.43
MCF2L-230ENST00000491028 P2RX6O15547 441 aa17.76■□□□□ 0.43
MCF2L-230ENST00000491028 VPS4BO75351 444 aa17.76■□□□□ 0.43
MCF2L-230ENST00000491028 SEMA3DO95025 777 aa17.76■□□□□ 0.43
MCF2L-230ENST00000491028 TBX6O95947 436 aaPredicted RBP17.76■□□□□ 0.43
MCF2L-230ENST00000491028 TGFB1P01137 390 aa17.76■□□□□ 0.43
MCF2L-230ENST00000491028 EIF2S1P05198 315 aaKnown RBP17.76■□□□□ 0.43
MCF2L-230ENST00000491028 DRD4P21917 467 aa17.76■□□□□ 0.43
MCF2L-230ENST00000491028 PRPH2P23942 346 aa17.76■□□□□ 0.43
MCF2L-230ENST00000491028 ARFIP1P53367 373 aa17.76■□□□□ 0.43
MCF2L-230ENST00000491028 EMP3P54852 163 aa17.76■□□□□ 0.43
MCF2L-230ENST00000491028 ITGA1P56199 1179 aa17.76■□□□□ 0.43
MCF2L-230ENST00000491028 WASHC2DQ5SRD0 308 aa17.76■□□□□ 0.43
MCF2L-230ENST00000491028 KHDRBS2Q5VWX1 349 aaKnown RBP17.76■□□□□ 0.43
MCF2L-230ENST00000491028 MAVSQ7Z434 540 aa17.76■□□□□ 0.43
MCF2L-230ENST00000491028 CPLX4Q7Z7G2 160 aa17.76■□□□□ 0.43
MCF2L-230ENST00000491028 GPR135Q8IZ08 494 aa17.76■□□□□ 0.43
MCF2L-230ENST00000491028 BMPERQ8N8U9 685 aa17.76■□□□□ 0.43
MCF2L-230ENST00000491028 SRFBP1Q8NEF9 429 aaKnown RBP17.76■□□□□ 0.43
MCF2L-230ENST00000491028 GAL3ST3Q96A11 431 aa17.76■□□□□ 0.43
MCF2L-230ENST00000491028 METTL2AQ96IZ6 378 aaKnown RBP17.76■□□□□ 0.43
MCF2L-230ENST00000491028 MAELQ96JY0 434 aaKnown RBP17.76■□□□□ 0.43
MCF2L-230ENST00000491028 OR6C1Q96RD1 312 aa17.76■□□□□ 0.43
MCF2L-230ENST00000491028 KLHL14Q9P2G3 628 aa17.76■□□□□ 0.43
MCF2L-230ENST00000491028 VPS29Q9UBQ0 182 aa17.76■□□□□ 0.43
MCF2L-230ENST00000491028 SERTAD3Q9UJW9 196 aa17.76■□□□□ 0.43
MCF2L-230ENST00000491028 SLC12A4Q9UP95 1085 aa17.76■□□□□ 0.43
MCF2L-230ENST00000491028 PTGDR2Q9Y5Y4 395 aa17.76■□□□□ 0.43
MCF2L-230ENST00000491028 CCDC187A0A096LP49 1063 aa17.75■□□□□ 0.43
MCF2L-230ENST00000491028 LRIT2A6NDA9 550 aa17.75■□□□□ 0.43
MCF2L-230ENST00000491028 B4E171 279 aa17.75■□□□□ 0.43
MCF2L-230ENST00000491028 H3BMH7 237 aa17.75■□□□□ 0.43
MCF2L-230ENST00000491028 SDHDO14521 159 aa17.75■□□□□ 0.43
MCF2L-230ENST00000491028 OR2B3O76000 313 aa17.75■□□□□ 0.43
MCF2L-230ENST00000491028 HNRNPH1P31943 449 aaKnown RBP17.75■□□□□ 0.43
MCF2L-230ENST00000491028 TSPAN7P41732 249 aa17.75■□□□□ 0.43
MCF2L-230ENST00000491028 AQP5P55064 265 aa17.75■□□□□ 0.43
MCF2L-230ENST00000491028 CLDN6P56747 220 aa17.75■□□□□ 0.43
MCF2L-230ENST00000491028 HMGCS1Q01581 520 aa17.75■□□□□ 0.43
MCF2L-230ENST00000491028 MC2RQ01718 297 aa17.75■□□□□ 0.43
MCF2L-230ENST00000491028 HYAL2Q12891 473 aa17.75■□□□□ 0.43
MCF2L-230ENST00000491028 IL11RAQ14626 422 aa17.75■□□□□ 0.43
MCF2L-230ENST00000491028 GRM7Q14831 915 aa17.75■□□□□ 0.43
MCF2L-230ENST00000491028 NR6A1Q15406 480 aa17.75■□□□□ 0.43
MCF2L-230ENST00000491028 HKDC1Q2TB90 917 aa17.75■□□□□ 0.43
MCF2L-230ENST00000491028 TOR1AIP1Q5JTV8 583 aa17.75■□□□□ 0.43
MCF2L-230ENST00000491028 GARNL3Q5VVW2 1013 aa17.75■□□□□ 0.43
MCF2L-230ENST00000491028 TLDC1Q6P9B6 456 aa17.75■□□□□ 0.43
MCF2L-230ENST00000491028 EPGNQ6UW88 154 aa17.75■□□□□ 0.43
MCF2L-230ENST00000491028 Q6ZSR9 355 aa17.75■□□□□ 0.43
MCF2L-230ENST00000491028 GALNT15Q8N3T1 639 aa17.75■□□□□ 0.43
MCF2L-230ENST00000491028 TTC29Q8NA56 475 aaPredicted RBP17.75■□□□□ 0.43
MCF2L-230ENST00000491028 OR2T11Q8NH01 316 aa17.75■□□□□ 0.43
MCF2L-230ENST00000491028 OR1L3Q8NH93 324 aa17.75■□□□□ 0.43
MCF2L-230ENST00000491028 PPP3R2Q96LZ3 170 aa17.75■□□□□ 0.43
MCF2L-230ENST00000491028 C3orf30Q96M34 536 aa17.75■□□□□ 0.43
MCF2L-230ENST00000491028 REXO4Q9GZR2 422 aaKnown RBP17.75■□□□□ 0.43
MCF2L-230ENST00000491028 OR51B5Q9H339 312 aa17.75■□□□□ 0.43
MCF2L-230ENST00000491028 FBXO8Q9NRD0 319 aa17.75■□□□□ 0.43
MCF2L-230ENST00000491028 IRAK4Q9NWZ3 460 aa17.75■□□□□ 0.43
MCF2L-230ENST00000491028 OCIAD1Q9NX40 245 aa17.75■□□□□ 0.43
MCF2L-230ENST00000491028 DLL3Q9NYJ7 618 aa17.75■□□□□ 0.43
MCF2L-230ENST00000491028 RARRES3Q9UL19 164 aa17.75■□□□□ 0.43
MCF2L-230ENST00000491028 LOXL2Q9Y4K0 774 aa17.75■□□□□ 0.43
MCF2L-230ENST00000491028 LSM1O15116 133 aaKnown RBP17.74■□□□□ 0.43
MCF2L-230ENST00000491028 ETHE1O95571 254 aa17.74■□□□□ 0.43
MCF2L-230ENST00000491028 FGF5P12034 268 aa17.74■□□□□ 0.43
MCF2L-230ENST00000491028 TSFMP43897 325 aaKnown RBP17.74■□□□□ 0.43
MCF2L-230ENST00000491028 RAP1GDS1P52306 607 aa17.74■□□□□ 0.43
MCF2L-230ENST00000491028 FOXM1Q08050 763 aa17.74■□□□□ 0.43
MCF2L-230ENST00000491028 TGM3Q08188 693 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms