RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 CDCA4Q9BXL8 241 aa18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 SLC29A3Q9BZD2 475 aa18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 CIPCQ9C0C6 399 aa18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 ABCG8Q9H221 673 aa18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 ABCB8Q9NUT2 735 aa18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 TOR4AQ9NXH8 423 aa18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 STMN3Q9NZ72 180 aa18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 SNX7Q9UNH6 387 aa18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.65■□□□□ 0.58
SNAPC3-206ENST00000490969 CPNE3O75131 537 aaKnown RBP18.65■□□□□ 0.58
SNAPC3-206ENST00000490969 ADRA2AP08913 450 aa18.65■□□□□ 0.58
SNAPC3-206ENST00000490969 FAM214AQ32MH5 1076 aa18.65■□□□□ 0.58
SNAPC3-206ENST00000490969 DEFB128Q7Z7B8 93 aa18.65■□□□□ 0.58
SNAPC3-206ENST00000490969 FAM9CQ8IZT9 166 aa18.65■□□□□ 0.58
SNAPC3-206ENST00000490969 GALNT6Q8NCL4 622 aa18.65■□□□□ 0.58
SNAPC3-206ENST00000490969 COQ8BQ96D53 544 aa18.65■□□□□ 0.58
SNAPC3-206ENST00000490969 SUSD3Q96L08 255 aa18.65■□□□□ 0.58
SNAPC3-206ENST00000490969 EXOSC4Q9NPD3 245 aaKnown RBP18.65■□□□□ 0.58
SNAPC3-206ENST00000490969 RLIMQ9NVW2 624 aa18.65■□□□□ 0.58
SNAPC3-206ENST00000490969 IMPAD1Q9NX62 359 aa18.65■□□□□ 0.58
SNAPC3-206ENST00000490969 DUSP12Q9UNI6 340 aa18.65■□□□□ 0.58
SNAPC3-206ENST00000490969 NT5C1B-RDH14C9J2C7 533 aa18.65■□□□□ 0.58
SNAPC3-206ENST00000490969 TNFRSF11BO00300 401 aa18.65■□□□□ 0.58
SNAPC3-206ENST00000490969 MLLT3P42568 568 aaPredicted RBP18.65■□□□□ 0.58
SNAPC3-206ENST00000490969 DAB2P98082 770 aa18.65■□□□□ 0.58
SNAPC3-206ENST00000490969 SCN1BQ07699 218 aa18.65■□□□□ 0.58
SNAPC3-206ENST00000490969 PPIGQ13427 754 aaKnown RBP eCLIP18.65■□□□□ 0.583e-7■□□□□ 10.9
SNAPC3-206ENST00000490969 DOC2BQ14184 412 aa18.65■□□□□ 0.58
SNAPC3-206ENST00000490969 PTRHD1Q6GMV3 140 aaKnown RBP18.65■□□□□ 0.58
SNAPC3-206ENST00000490969 ZNF621Q6ZSS3 439 aa18.65■□□□□ 0.58
SNAPC3-206ENST00000490969 MSANTD1Q6ZTZ1 278 aa18.65■□□□□ 0.58
SNAPC3-206ENST00000490969 SLC38A6Q8IZM9 456 aa18.65■□□□□ 0.58
SNAPC3-206ENST00000490969 CPA6Q8N4T0 437 aa18.65■□□□□ 0.58
SNAPC3-206ENST00000490969 OR7D4Q8NG98 312 aa18.65■□□□□ 0.58
SNAPC3-206ENST00000490969 OR10G2Q8NGC3 310 aa18.65■□□□□ 0.58
SNAPC3-206ENST00000490969 TTC9Q92623 222 aa18.65■□□□□ 0.58
SNAPC3-206ENST00000490969 HHIPQ96QV1 700 aa18.65■□□□□ 0.58
SNAPC3-206ENST00000490969 TAPBPLQ9BX59 468 aa18.65■□□□□ 0.58
SNAPC3-206ENST00000490969 SATB2Q9UPW6 733 aa18.65■□□□□ 0.58
SNAPC3-206ENST00000490969 PCDHGC4Q9Y5F7 938 aa18.65■□□□□ 0.58
SNAPC3-206ENST00000490969 CLDN9O95484 217 aa18.64■□□□□ 0.57
SNAPC3-206ENST00000490969 NAT1P18440 290 aa18.64■□□□□ 0.57
SNAPC3-206ENST00000490969 RGS4P49798 205 aa18.64■□□□□ 0.57
SNAPC3-206ENST00000490969 CRYBA2P53672 197 aa18.64■□□□□ 0.57
SNAPC3-206ENST00000490969 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.64■□□□□ 0.57
SNAPC3-206ENST00000490969 ASAH1Q13510 395 aa18.64■□□□□ 0.57
SNAPC3-206ENST00000490969 TMEM173Q86WV6 379 aaPredicted RBP18.64■□□□□ 0.57
SNAPC3-206ENST00000490969 ZFAND1Q8TCF1 268 aa18.64■□□□□ 0.57
SNAPC3-206ENST00000490969 UBTD2Q8WUN7 234 aa18.64■□□□□ 0.57
SNAPC3-206ENST00000490969 SELENOMQ8WWX9 145 aa18.64■□□□□ 0.57
SNAPC3-206ENST00000490969 VWCEQ96DN2 955 aa18.64■□□□□ 0.57
SNAPC3-206ENST00000490969 ABI2Q9NYB9 513 aaPredicted RBP18.64■□□□□ 0.57
SNAPC3-206ENST00000490969 POFUT2Q9Y2G5 429 aa18.64■□□□□ 0.57
SNAPC3-206ENST00000490969 PCDHB1Q9Y5F3 818 aa18.64■□□□□ 0.57
SNAPC3-206ENST00000490969 MAGEB17A8MXT2 336 aa18.64■□□□□ 0.57
SNAPC3-206ENST00000490969 H3BM21 787 aa18.64■□□□□ 0.57
SNAPC3-206ENST00000490969 H7C0S8 307 aa18.64■□□□□ 0.57
SNAPC3-206ENST00000490969 SCAMP3O14828 347 aaKnown RBP18.64■□□□□ 0.57
SNAPC3-206ENST00000490969 SUV39H1O43463 412 aa18.64■□□□□ 0.57
SNAPC3-206ENST00000490969 ZNF780AO75290 641 aaPredicted RBP18.64■□□□□ 0.57
SNAPC3-206ENST00000490969 ARHGEF15O94989 841 aa18.64■□□□□ 0.57
SNAPC3-206ENST00000490969 MYL9P24844 172 aa18.64■□□□□ 0.57
SNAPC3-206ENST00000490969 OR3A3P47888 321 aa18.64■□□□□ 0.57
SNAPC3-206ENST00000490969 TLE2Q04725 743 aa18.64■□□□□ 0.57
SNAPC3-206ENST00000490969 ABRQ12979 859 aa18.64■□□□□ 0.57
SNAPC3-206ENST00000490969 VEZF1Q14119 521 aa18.64■□□□□ 0.57
SNAPC3-206ENST00000490969 NFE2Q16621 373 aaPredicted RBP18.64■□□□□ 0.57
SNAPC3-206ENST00000490969 RDH10Q8IZV5 341 aa18.64■□□□□ 0.57
SNAPC3-206ENST00000490969 VWA5B2Q8N398 1253 aa18.64■□□□□ 0.57
SNAPC3-206ENST00000490969 WDFY2Q96P53 400 aa18.64■□□□□ 0.57
SNAPC3-206ENST00000490969 CASD1Q96PB1 797 aa18.64■□□□□ 0.57
SNAPC3-206ENST00000490969 TLR8Q9NR97 1041 aaKnown RBP18.64■□□□□ 0.57
SNAPC3-206ENST00000490969 PADI2Q9Y2J8 665 aa18.64■□□□□ 0.57
SNAPC3-206ENST00000490969 OR6C70A6NIJ9 312 aa18.63■□□□□ 0.57
SNAPC3-206ENST00000490969 ALPPP05187 535 aa18.63■□□□□ 0.57
SNAPC3-206ENST00000490969 GPR15P49685 360 aa18.63■□□□□ 0.57
SNAPC3-206ENST00000490969 PSPHP78330 225 aa18.63■□□□□ 0.57
SNAPC3-206ENST00000490969 FCHO2Q0JRZ9 810 aa18.63■□□□□ 0.57
SNAPC3-206ENST00000490969 GPR155Q7Z3F1 870 aa18.63■□□□□ 0.57
SNAPC3-206ENST00000490969 TSEN54Q7Z6J9 526 aaKnown RBP18.63■□□□□ 0.57
SNAPC3-206ENST00000490969 CCDC28AQ8IWP9 274 aa18.63■□□□□ 0.57
SNAPC3-206ENST00000490969 CRIPAKQ8N1N5 446 aa18.63■□□□□ 0.57
SNAPC3-206ENST00000490969 CFAP52Q8N1V2 620 aa18.63■□□□□ 0.57
SNAPC3-206ENST00000490969 SYNPOQ8N3V7 929 aa18.63■□□□□ 0.57
SNAPC3-206ENST00000490969 FAM109AQ8N4B1 249 aa18.63■□□□□ 0.57
SNAPC3-206ENST00000490969 SPERTQ8NA61 448 aa18.63■□□□□ 0.57
SNAPC3-206ENST00000490969 OR5H6Q8NGV6 325 aa18.63■□□□□ 0.57
SNAPC3-206ENST00000490969 VANGL1Q8TAA9 524 aaPredicted RBP18.63■□□□□ 0.57
SNAPC3-206ENST00000490969 LKAAEAR1Q8TD35 194 aa18.63■□□□□ 0.57
SNAPC3-206ENST00000490969 UBASH3BQ8TF42 649 aa18.63■□□□□ 0.57
SNAPC3-206ENST00000490969 SNAPC3Q92966 411 aa18.63■□□□□ 0.57
SNAPC3-206ENST00000490969 C8orf48Q96LL4 319 aa18.63■□□□□ 0.57
SNAPC3-206ENST00000490969 NIPSNAP1Q9BPW8 284 aa18.63■□□□□ 0.57
SNAPC3-206ENST00000490969 TMEM161AQ9NX61 479 aa18.63■□□□□ 0.57
SNAPC3-206ENST00000490969 UBA2Q9UBT2 640 aaPredicted RBP18.63■□□□□ 0.57
SNAPC3-206ENST00000490969 DNMT3LQ9UJW3 386 aa18.63■□□□□ 0.57
SNAPC3-206ENST00000490969 RAI2Q9Y5P3 530 aa18.63■□□□□ 0.57
SNAPC3-206ENST00000490969 A0A0B4J293 547 aa18.63■□□□□ 0.57
SNAPC3-206ENST00000490969 SLC35F4A4IF30 521 aa18.63■□□□□ 0.57
SNAPC3-206ENST00000490969 B4DXG7 233 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms