RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 FAM162AQ96A26 154 aa4.59□□□□□ -1.67
SSX2IP-208ENST00000490476 PHF21AQ96BD5 680 aa4.59□□□□□ -1.67
SSX2IP-208ENST00000490476 ARSGQ96EG1 525 aa4.59□□□□□ -1.67
SSX2IP-208ENST00000490476 OTUB1Q96FW1 271 aaPredicted RBP4.59□□□□□ -1.67
SSX2IP-208ENST00000490476 CAMK1GQ96NX5 476 aa4.59□□□□□ -1.67
SSX2IP-208ENST00000490476 KATNB1Q9BVA0 655 aa4.59□□□□□ -1.67
SSX2IP-208ENST00000490476 TEX13BQ9BXU2 312 aa4.59□□□□□ -1.67
SSX2IP-208ENST00000490476 SMARCAL1Q9NZC9 954 aa4.59□□□□□ -1.67
SSX2IP-208ENST00000490476 MALT1Q9UDY8 824 aa4.59□□□□□ -1.67
SSX2IP-208ENST00000490476 YIPF1Q9Y548 306 aa4.59□□□□□ -1.67
SSX2IP-208ENST00000490476 RYR3Q15413 4870 aa4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 NRCAMQ92823 1304 aa4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 ANXA2P2A6NMY6 339 aa4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 H0YAE9 185 aa4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 SYNCRIPO60506 623 aaKnown RBP4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 WISP2O76076 250 aa4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 ACSL3O95573 720 aa4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 TOMM40O96008 361 aa4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 IGKV5-2P06315 115 aa4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 ACAA1P09110 424 aaPredicted RBP4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 OR2T7P0C7T2 308 aa4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 ITGA2P17301 1181 aa4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 ATP5DP30049 168 aa4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 HOXC8P31273 242 aa4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 CNTN2Q02246 1040 aa4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 NFE2L1Q14494 772 aa4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 NFATC4Q14934 902 aa4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 ZNF260Q3ZCT1 412 aa4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 FAM122CQ6P4D5 195 aa4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 CCDC170Q8IYT3 715 aa4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 C1orf87Q8N0U7 546 aa4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 FBXL14Q8N1E6 418 aa4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 PELI3Q8N2H9 469 aa4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 CLIP4Q8N3C7 705 aa4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 TMCO5AQ8N6Q1 288 aa4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 MRPL43Q8N983 215 aaKnown RBP4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 ZNF114Q8NC26 417 aa4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 BBS10Q8TAM1 723 aa4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 DAZLQ92904 295 aaKnown RBP4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 EXT2Q93063 718 aa4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 EXOC4Q96A65 974 aa4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 INTS14Q96SY0 518 aa4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 LGMNQ99538 433 aa4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 NUSAP1Q9BXS6 441 aaKnown RBP4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 COPS7BQ9H9Q2 264 aaPredicted RBP4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 TRPC7Q9HCX4 862 aa4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 MYNNQ9NPC7 610 aa4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 HEBP1Q9NRV9 189 aa4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 DDX43Q9NXZ2 648 aaKnown RBP4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 ZNF224Q9NZL3 707 aa4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 RNF7Q9UBF6 113 aa4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 PCDHA7Q9UN72 937 aa4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 KCNK7Q9Y2U2 307 aa4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 GRIP1Q9Y3R0 1128 aa4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 SPIN1Q9Y657 262 aaPredicted RBP4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 DDX49Q9Y6V7 483 aaKnown RBP4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 ESPL1Q14674 2120 aa4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 MXRA5Q9NR99 2828 aa4.58□□□□□ -1.68
SSX2IP-208ENST00000490476 NOTCH4Q99466 2003 aa4.57□□□□□ -1.68
SSX2IP-208ENST00000490476 IGLV5-37A0A075B6J1 123 aa4.57□□□□□ -1.68
SSX2IP-208ENST00000490476 FEZF1A0PJY2 475 aa4.57□□□□□ -1.68
SSX2IP-208ENST00000490476 CLIC2O15247 247 aa4.57□□□□□ -1.68
SSX2IP-208ENST00000490476 EIF3DO15371 548 aaKnown RBP eCLIP4.57□□□□□ -1.68
SSX2IP-208ENST00000490476 GPR137BO60478 399 aa4.57□□□□□ -1.68
SSX2IP-208ENST00000490476 WDR1O75083 606 aa4.57□□□□□ -1.68
SSX2IP-208ENST00000490476 GCNT3O95395 438 aa4.57□□□□□ -1.68
SSX2IP-208ENST00000490476 PMS2P2O95744 297 aa4.57□□□□□ -1.68
SSX2IP-208ENST00000490476 GBAP04062 536 aa4.57□□□□□ -1.68
SSX2IP-208ENST00000490476 DANCRP0C864 163 aa4.57□□□□□ -1.68
SSX2IP-208ENST00000490476 CD59P13987 128 aa4.57□□□□□ -1.68
SSX2IP-208ENST00000490476 TCEA1P23193 301 aaKnown RBP4.57□□□□□ -1.68
SSX2IP-208ENST00000490476 EEF1B2P24534 225 aaKnown RBP4.57□□□□□ -1.68
SSX2IP-208ENST00000490476 RBMXP38159 391 aaKnown RBP4.57□□□□□ -1.68
SSX2IP-208ENST00000490476 SLC9A3P48764 834 aa4.57□□□□□ -1.68
SSX2IP-208ENST00000490476 ATXN3P54252 364 aaPredicted RBP4.57□□□□□ -1.68
SSX2IP-208ENST00000490476 RELQ04864 619 aaPredicted RBP4.57□□□□□ -1.68
SSX2IP-208ENST00000490476 GTF2H2Q13888 395 aa4.57□□□□□ -1.68
SSX2IP-208ENST00000490476 ZNF234Q14588 700 aa4.57□□□□□ -1.68
SSX2IP-208ENST00000490476 E2F5Q15329 346 aa4.57□□□□□ -1.68
SSX2IP-208ENST00000490476 TWIST1Q15672 202 aa4.57□□□□□ -1.68
SSX2IP-208ENST00000490476 MAPK6Q16659 721 aa4.57□□□□□ -1.68
SSX2IP-208ENST00000490476 BEND3Q5T5X7 828 aa4.57□□□□□ -1.68
SSX2IP-208ENST00000490476 IRAK1BP1Q5VVH5 260 aa4.57□□□□□ -1.68
SSX2IP-208ENST00000490476 GTF2H2CQ6P1K8 395 aa4.57□□□□□ -1.68
SSX2IP-208ENST00000490476 KLC3Q6P597 504 aa4.57□□□□□ -1.68
SSX2IP-208ENST00000490476 FAM198BQ6UWH4 519 aa4.57□□□□□ -1.68
SSX2IP-208ENST00000490476 C11orf57Q6ZUT1 292 aaPredicted RBP4.57□□□□□ -1.68
SSX2IP-208ENST00000490476 SPATA19Q7Z5L4 167 aa4.57□□□□□ -1.68
SSX2IP-208ENST00000490476 FOXP4Q8IVH2 680 aaPredicted RBP4.57□□□□□ -1.68
SSX2IP-208ENST00000490476 FAM219AQ8IW50 185 aa4.57□□□□□ -1.68
SSX2IP-208ENST00000490476 KLHL7Q8IXQ5 586 aa4.57□□□□□ -1.68
SSX2IP-208ENST00000490476 ZNF713Q8N859 430 aaPredicted RBP4.57□□□□□ -1.68
SSX2IP-208ENST00000490476 PAPD5Q8NDF8 572 aaKnown RBP4.57□□□□□ -1.68
SSX2IP-208ENST00000490476 SSC4DQ8WTU2 575 aa4.57□□□□□ -1.68
SSX2IP-208ENST00000490476 TMEM255BQ8WV15 326 aa4.57□□□□□ -1.68
SSX2IP-208ENST00000490476 SYN2Q92777 582 aaPredicted RBP4.57□□□□□ -1.68
SSX2IP-208ENST00000490476 HES6Q96HZ4 224 aa4.57□□□□□ -1.68
SSX2IP-208ENST00000490476 RMDN2Q96LZ7 410 aa4.57□□□□□ -1.68
SSX2IP-208ENST00000490476 ZNF48Q96MX3 618 aaPredicted RBP4.57□□□□□ -1.68
SSX2IP-208ENST00000490476 LMF2Q9BU23 707 aaKnown RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms