RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 CDKN3Q16667 212 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 MAJINQ3KP22 176 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 NCR3LG1Q68D85 454 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 RAET1GQ6H3X3 334 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 PYHIN1Q6K0P9 492 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 AFTPHQ6ULP2 937 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 DET1Q7L5Y6 550 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 SPATA21Q7Z572 469 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 HAPLN4Q86UW8 402 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 CCDC50Q8IVM0 306 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 MCUQ8NE86 351 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 ATP8B4Q8TF62 1192 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 C17orf50Q8WW18 174 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 SPDL1Q96EA4 605 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 RNF31Q96EP0 1072 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 SENP5Q96HI0 755 aaPredicted RBP2.76□□□□□ -1.97
UBXN4-208ENST00000490163 LZTS2Q9BRK4 669 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 CDK19Q9BWU1 502 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 TRIM4Q9C037 500 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 TRPV6Q9H1D0 765 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 CALHM2Q9HA72 323 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 BATF3Q9NR55 127 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 HOMER3Q9NSC5 361 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 AGPAT5Q9NUQ2 364 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 ASNSD1Q9NWL6 643 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 ZNF510Q9Y2H8 683 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 MSH6P52701 1360 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 BRCA1P38398 1863 aaKnown RBP2.76□□□□□ -1.97
UBXN4-208ENST00000490163 EME2A4GXA9 379 aaPredicted RBP2.76□□□□□ -1.97
UBXN4-208ENST00000490163 FRG2CA6NGY1 282 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 TARM1B6A8C7 271 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 ETV2O00321 342 aaPredicted RBP2.76□□□□□ -1.97
UBXN4-208ENST00000490163 SSX4O60224 188 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 GPC4O75487 556 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 PRAMEF12O95522 483 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 NPSP0C0P6 89 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 CYP2F1P24903 491 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 CCT8P50990 548 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 GP2P55259 537 aaKnown RBP2.76□□□□□ -1.97
UBXN4-208ENST00000490163 NME5P56597 212 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 TDGQ13569 410 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 GPR50Q13585 617 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 GIT2Q14161 759 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 PDK3Q15120 406 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 USP39Q53GS9 565 aaKnown RBP2.76□□□□□ -1.97
UBXN4-208ENST00000490163 PRR23BQ6ZRT6 265 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 IQCF2Q8IXL9 164 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 VPS52Q8N1B4 723 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 CCDC110Q8TBZ0 833 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 KAT2BQ92831 832 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 NTNG2Q96CW9 530 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 OTUB1Q96FW1 271 aaPredicted RBP2.76□□□□□ -1.97
UBXN4-208ENST00000490163 C10orf90Q96M02 699 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 MMS19Q96T76 1030 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 ASCL2Q99929 193 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 SLA2Q9H6Q3 261 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 VPS37BQ9H9H4 285 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.76□□□□□ -1.97
UBXN4-208ENST00000490163 RHCGQ9UBD6 479 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 IL20RAQ9UHF4 553 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 STRAPQ9Y3F4 350 aaKnown RBP2.76□□□□□ -1.97
UBXN4-208ENST00000490163 ATP6V1DQ9Y5K8 247 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 HHLA1C9JL84 531 aa2.75□□□□□ -1.97
UBXN4-208ENST00000490163 VCYO14598 125 aa2.75□□□□□ -1.97
UBXN4-208ENST00000490163 STRNO43815 780 aa2.75□□□□□ -1.97
UBXN4-208ENST00000490163 ATP9AO75110 1047 aa2.75□□□□□ -1.97
UBXN4-208ENST00000490163 PLAUP00749 431 aa2.75□□□□□ -1.97
UBXN4-208ENST00000490163 IL1AP01583 271 aa2.75□□□□□ -1.97
UBXN4-208ENST00000490163 ANKRD34CP0C6C1 535 aa2.75□□□□□ -1.97
UBXN4-208ENST00000490163 CHRNA3P32297 505 aa2.75□□□□□ -1.97
UBXN4-208ENST00000490163 CA8P35219 290 aa2.75□□□□□ -1.97
UBXN4-208ENST00000490163 SKIV2L2P42285 1042 aaKnown RBP2.75□□□□□ -1.97
UBXN4-208ENST00000490163 TNFSF10P50591 281 aa2.75□□□□□ -1.97
UBXN4-208ENST00000490163 PRRX1P54821 245 aa2.75□□□□□ -1.97
UBXN4-208ENST00000490163 SLC8A3P57103 927 aa2.75□□□□□ -1.97
UBXN4-208ENST00000490163 SRP54P61011 504 aaKnown RBP2.75□□□□□ -1.97
UBXN4-208ENST00000490163 POLR2FP61218 127 aaKnown RBP2.75□□□□□ -1.97
UBXN4-208ENST00000490163 IL10RBQ08334 325 aa2.75□□□□□ -1.97
UBXN4-208ENST00000490163 NAE1Q13564 534 aa2.75□□□□□ -1.97
UBXN4-208ENST00000490163 SNX1Q13596 522 aa2.75□□□□□ -1.97
UBXN4-208ENST00000490163 DDX39BQ13838 428 aaKnown RBP2.75□□□□□ -1.97
UBXN4-208ENST00000490163 DCAF4L1Q3SXM0 396 aa2.75□□□□□ -1.97
UBXN4-208ENST00000490163 LINC01620Q4KN68 170 aa2.75□□□□□ -1.97
UBXN4-208ENST00000490163 XKR6Q5GH73 641 aa2.75□□□□□ -1.97
UBXN4-208ENST00000490163 SPDYCQ5MJ68 293 aa2.75□□□□□ -1.97
UBXN4-208ENST00000490163 LCTLQ6UWM7 567 aa2.75□□□□□ -1.97
UBXN4-208ENST00000490163 SCCPDHQ8NBX0 429 aa2.75□□□□□ -1.97
UBXN4-208ENST00000490163 OR5AU1Q8NGC0 362 aa2.75□□□□□ -1.97
UBXN4-208ENST00000490163 ANKRD49Q8WVL7 239 aa2.75□□□□□ -1.97
UBXN4-208ENST00000490163 COQ8BQ96D53 544 aa2.75□□□□□ -1.97
UBXN4-208ENST00000490163 C17orf62Q9BQA9 187 aa2.75□□□□□ -1.97
UBXN4-208ENST00000490163 ZNF559Q9BR84 538 aa2.75□□□□□ -1.97
UBXN4-208ENST00000490163 CBWD1Q9BRT8 395 aa2.75□□□□□ -1.97
UBXN4-208ENST00000490163 MMTAG2Q9BU76 263 aaKnown RBP2.75□□□□□ -1.97
UBXN4-208ENST00000490163 ABHD14AQ9BUJ0 271 aa2.75□□□□□ -1.97
UBXN4-208ENST00000490163 UBXN6Q9BZV1 441 aa2.75□□□□□ -1.97
UBXN4-208ENST00000490163 PPP1R3EQ9H7J1 279 aa2.75□□□□□ -1.97
UBXN4-208ENST00000490163 AKIRIN1Q9H9L7 192 aaPredicted RBP2.75□□□□□ -1.97
UBXN4-208ENST00000490163 UBTD1Q9HAC8 227 aa2.75□□□□□ -1.97
UBXN4-208ENST00000490163 TMEM165Q9HC07 324 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms