RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 C17orf64Q86WR6 236 aa14.92□□□□□ -0.02
PLOD3-216ENST00000489927 EEF1AKMT1Q8WVE0 214 aa14.92□□□□□ -0.02
PLOD3-216ENST00000489927 ALKBH8Q96BT7 664 aaKnown RBP14.92□□□□□ -0.02
PLOD3-216ENST00000489927 SERPINB12Q96P63 405 aa14.92□□□□□ -0.02
PLOD3-216ENST00000489927 OR1F2PQ96R84 312 aa14.92□□□□□ -0.02
PLOD3-216ENST00000489927 TRIM51Q9BSJ1 452 aa14.92□□□□□ -0.02
PLOD3-216ENST00000489927 AARSD1Q9BTE6 412 aaKnown RBP14.92□□□□□ -0.02
PLOD3-216ENST00000489927 ATG10Q9H0Y0 220 aa14.92□□□□□ -0.02
PLOD3-216ENST00000489927 HOMER3Q9NSC5 361 aa14.92□□□□□ -0.02
PLOD3-216ENST00000489927 C20orf96Q9NUD7 363 aaPredicted RBP14.92□□□□□ -0.02
PLOD3-216ENST00000489927 LRFN1Q9P244 771 aa14.92□□□□□ -0.02
PLOD3-216ENST00000489927 ITGB1BP2Q9UKP3 347 aa14.92□□□□□ -0.02
PLOD3-216ENST00000489927 PDE10AQ9Y233 779 aa14.92□□□□□ -0.02
PLOD3-216ENST00000489927 COMMD10Q9Y6G5 202 aa14.92□□□□□ -0.02
PLOD3-216ENST00000489927 NCOA6Q14686 2063 aaPredicted RBP14.92□□□□□ -0.02
PLOD3-216ENST00000489927 PKDREJQ9NTG1 2253 aa14.91□□□□□ -0.02
PLOD3-216ENST00000489927 MAGEB17A8MXT2 336 aa14.91□□□□□ -0.02
PLOD3-216ENST00000489927 CDH1P12830 882 aa14.91□□□□□ -0.02
PLOD3-216ENST00000489927 CDC25BP30305 580 aa14.91□□□□□ -0.02
PLOD3-216ENST00000489927 SSTR2P30874 369 aa14.91□□□□□ -0.02
PLOD3-216ENST00000489927 GRK3P35626 688 aa14.91□□□□□ -0.02
PLOD3-216ENST00000489927 SLC26A5P58743 744 aa14.91□□□□□ -0.02
PLOD3-216ENST00000489927 TAS2R50P59544 299 aa14.91□□□□□ -0.02
PLOD3-216ENST00000489927 NAE1Q13564 534 aa14.91□□□□□ -0.02
PLOD3-216ENST00000489927 ZNF468Q5VIY5 522 aaPredicted RBP14.91□□□□□ -0.02
PLOD3-216ENST00000489927 SLC25A25Q6KCM7 469 aa14.91□□□□□ -0.02
PLOD3-216ENST00000489927 GAS2L3Q86XJ1 694 aa14.91□□□□□ -0.02
PLOD3-216ENST00000489927 CHERPQ8IWX8 916 aaKnown RBP14.91□□□□□ -0.02
PLOD3-216ENST00000489927 LGI4Q8N135 537 aa14.91□□□□□ -0.02
PLOD3-216ENST00000489927 AGGF1Q8N302 714 aaeCLIP14.91□□□□□ -0.02
PLOD3-216ENST00000489927 KIF2BQ8N4N8 673 aa14.91□□□□□ -0.02
PLOD3-216ENST00000489927 HORMAD2Q8N7B1 307 aa14.91□□□□□ -0.02
PLOD3-216ENST00000489927 MFSD9Q8NBP5 474 aa14.91□□□□□ -0.02
PLOD3-216ENST00000489927 FAM98AQ8NCA5 519 aaKnown RBP14.91□□□□□ -0.02
PLOD3-216ENST00000489927 AGAP11Q8TF27 550 aa14.91□□□□□ -0.02
PLOD3-216ENST00000489927 SGPP1Q9BX95 441 aa14.91□□□□□ -0.02
PLOD3-216ENST00000489927 FAM129AQ9BZQ8 928 aa14.91□□□□□ -0.02
PLOD3-216ENST00000489927 CDCP1Q9H5V8 836 aa14.91□□□□□ -0.02
PLOD3-216ENST00000489927 GPAMQ9HCL2 828 aa14.91□□□□□ -0.02
PLOD3-216ENST00000489927 XAB2Q9HCS7 855 aaKnown RBP14.91□□□□□ -0.02
PLOD3-216ENST00000489927 LZTFL1Q9NQ48 299 aa14.91□□□□□ -0.02
PLOD3-216ENST00000489927 TRMT6Q9UJA5 497 aaKnown RBP14.91□□□□□ -0.02
PLOD3-216ENST00000489927 FBXO5Q9UKT4 447 aa14.91□□□□□ -0.02
PLOD3-216ENST00000489927 F8P00451 2351 aa14.91□□□□□ -0.02
PLOD3-216ENST00000489927 NDC80O14777 642 aa14.9□□□□□ -0.02
PLOD3-216ENST00000489927 NDUFS4O43181 175 aa14.9□□□□□ -0.02
PLOD3-216ENST00000489927 DNAJB6O75190 326 aa14.9□□□□□ -0.02
PLOD3-216ENST00000489927 KRT14P02533 472 aa14.9□□□□□ -0.02
PLOD3-216ENST00000489927 C8GP07360 202 aa14.9□□□□□ -0.02
PLOD3-216ENST00000489927 FHP07954 510 aa14.9□□□□□ -0.02
PLOD3-216ENST00000489927 ABOP16442 354 aa14.9□□□□□ -0.02
PLOD3-216ENST00000489927 NPPBP16860 134 aa14.9□□□□□ -0.02
PLOD3-216ENST00000489927 IL10P22301 178 aa14.9□□□□□ -0.02
PLOD3-216ENST00000489927 OR4D2P58180 307 aa14.9□□□□□ -0.02
PLOD3-216ENST00000489927 KRTAP10-9P60411 292 aa14.9□□□□□ -0.02
PLOD3-216ENST00000489927 TIAL1Q01085 375 aaKnown RBP eCLIP14.9□□□□□ -0.02
PLOD3-216ENST00000489927 HERC3Q15034 1050 aa14.9□□□□□ -0.02
PLOD3-216ENST00000489927 MAPKAPK3Q16644 382 aa14.9□□□□□ -0.02
PLOD3-216ENST00000489927 HSP90AA5PQ58FG0 334 aa14.9□□□□□ -0.02
PLOD3-216ENST00000489927 RNFT1Q5M7Z0 435 aa14.9□□□□□ -0.02
PLOD3-216ENST00000489927 LRRC8EQ6NSJ5 796 aa14.9□□□□□ -0.02
PLOD3-216ENST00000489927 TTC27Q6P3X3 843 aa14.9□□□□□ -0.02
PLOD3-216ENST00000489927 LCTLQ6UWM7 567 aa14.9□□□□□ -0.02
PLOD3-216ENST00000489927 C3P1Q6ZMU1 363 aa14.9□□□□□ -0.02
PLOD3-216ENST00000489927 RPS19BP1Q86WX3 136 aaKnown RBP14.9□□□□□ -0.02
PLOD3-216ENST00000489927 DOLPP1Q86YN1 238 aa14.9□□□□□ -0.02
PLOD3-216ENST00000489927 LMNTD2Q8IXW0 634 aa14.9□□□□□ -0.02
PLOD3-216ENST00000489927 GHDCQ8N2G8 530 aa14.9□□□□□ -0.02
PLOD3-216ENST00000489927 AFAP1L2Q8N4X5 818 aa14.9□□□□□ -0.02
PLOD3-216ENST00000489927 CPSF7Q8N684 471 aaKnown RBP14.9□□□□□ -0.02
PLOD3-216ENST00000489927 ZNF740Q8NDX6 193 aa14.9□□□□□ -0.02
PLOD3-216ENST00000489927 MCUQ8NE86 351 aa14.9□□□□□ -0.02
PLOD3-216ENST00000489927 ELP5Q8TE02 316 aa14.9□□□□□ -0.02
PLOD3-216ENST00000489927 TBC1D20Q96BZ9 403 aa14.9□□□□□ -0.02
PLOD3-216ENST00000489927 NDNQ99608 321 aa14.9□□□□□ -0.02
PLOD3-216ENST00000489927 PARVBQ9HBI1 364 aa14.9□□□□□ -0.02
PLOD3-216ENST00000489927 MAD1L1Q9Y6D9 718 aa14.9□□□□□ -0.02
PLOD3-216ENST00000489927 HIVEP1P15822 2718 aa14.9□□□□□ -0.02
PLOD3-216ENST00000489927 SCN3AQ9NY46 2000 aa14.9□□□□□ -0.02
PLOD3-216ENST00000489927 NME2P1O60361 137 aa14.89□□□□□ -0.03
PLOD3-216ENST00000489927 GALR3O60755 368 aaPredicted RBP14.89□□□□□ -0.03
PLOD3-216ENST00000489927 SLC25A12O75746 678 aa14.89□□□□□ -0.03
PLOD3-216ENST00000489927 B3GALT4O96024 378 aa14.89□□□□□ -0.03
PLOD3-216ENST00000489927 ZNF24P17028 368 aa14.89□□□□□ -0.03
PLOD3-216ENST00000489927 NME2P22392 152 aa14.89□□□□□ -0.03
PLOD3-216ENST00000489927 CCND1P24385 295 aa14.89□□□□□ -0.03
PLOD3-216ENST00000489927 TPP2P29144 1249 aaPredicted RBP14.89□□□□□ -0.03
PLOD3-216ENST00000489927 MAGEA3P43357 314 aa14.89□□□□□ -0.03
PLOD3-216ENST00000489927 OLR1P78380 273 aa14.89□□□□□ -0.03
PLOD3-216ENST00000489927 MEF2AQ02078 507 aaPredicted RBP14.89□□□□□ -0.03
PLOD3-216ENST00000489927 SP140Q13342 867 aa14.89□□□□□ -0.03
PLOD3-216ENST00000489927 PHKG1Q16816 387 aa14.89□□□□□ -0.03
PLOD3-216ENST00000489927 DEFB134Q4QY38 66 aa14.89□□□□□ -0.03
PLOD3-216ENST00000489927 FGD2Q7Z6J4 655 aa14.89□□□□□ -0.03
PLOD3-216ENST00000489927 ZNF227Q86WZ6 799 aa14.89□□□□□ -0.03
PLOD3-216ENST00000489927 CEP97Q8IW35 865 aa14.89□□□□□ -0.03
PLOD3-216ENST00000489927 PALM2Q8IXS6 379 aa14.89□□□□□ -0.03
PLOD3-216ENST00000489927 CALML6Q8TD86 181 aa14.89□□□□□ -0.03
PLOD3-216ENST00000489927 ASB1Q9Y576 335 aa14.89□□□□□ -0.03
PLOD3-216ENST00000489927 PCNX1Q96RV3 2341 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms