RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 UBFD1O14562 309 aaKnown RBP10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 KLF11O14901 512 aa10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 ITM2AO43736 263 aa10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 TRIM13O60858 407 aa10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 SNNO75324 88 aaPredicted RBP10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 GFAPP14136 432 aa10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 EEF1DP29692 281 aaKnown RBP10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 GRIA3P42263 894 aa10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 HSPA7P48741 367 aa10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 HNMTP50135 292 aa10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 PNLIPRP1P54315 467 aa10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 NAGLUP54802 743 aa10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 TBPL1P62380 186 aa10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 HERVK_113P63132 956 aa10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 BST1Q10588 318 aa10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 CHI3L2Q15782 390 aa10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 YOD1Q5VVQ6 348 aaPredicted RBP10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 FCRL6Q6DN72 434 aa10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 FRMD7Q6ZUT3 714 aa10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 PTRH1Q86Y79 214 aaKnown RBP10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 RAB43Q86YS6 212 aa10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 NUDCD3Q8IVD9 361 aa10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 SLC22A9Q8IVM8 553 aa10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 OR2L3Q8NG85 312 aa10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 OR2A1Q8NGT9 310 aa10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 LRRC8CQ8TDW0 803 aa10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 SMPDL3AQ92484 453 aa10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 ZNF75CPQ92670 426 aaPredicted RBP10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 PYCR2Q96C36 320 aa10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 IP6K3Q96PC2 410 aa10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 ZNF317Q96PQ6 595 aaPredicted RBP10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 SORT1Q99523 831 aa10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 MIPEPQ99797 713 aa10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 EGFL8Q99944 293 aa10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 PAIP2Q9BPZ3 127 aaKnown RBP10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 ERVK-6Q9BXR3 956 aa10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 CD244Q9BZW8 370 aa10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 ATG10Q9H0Y0 220 aa10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 ENAMQ9NRM1 1142 aa10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 IFT80Q9P2H3 777 aaPredicted RBP10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 DHCR7Q9UBM7 475 aaKnown RBP10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 NDOR1Q9UHB4 597 aa10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 ZNF225Q9UK10 706 aa10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 SH2B3Q9UQQ2 575 aa10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 TP53TG5Q9Y2B4 290 aa10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 GCN1Q92616 2671 aaKnown RBP10.08□□□□□ -0.8
SCAMP4-208ENST00000489554 A0A1B0GX78 115 aa10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 ARGFXA6NJG6 315 aa10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 OR7A17O14581 309 aa10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 SRPX2O60687 465 aaPredicted RBP10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 LYPLA1O75608 230 aaPredicted RBP10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 WISP1O95388 367 aa10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 SERPINE1P05121 402 aa10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 CHRNGP07510 517 aa10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 HIST1H2AGP0C0S8 130 aaPredicted RBP10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 PIM1P11309 404 aaPredicted RBP10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 HIST1H2ADP20671 130 aa10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 PSMB5P28074 263 aa10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 CMPK1P30085 196 aa10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 CASRP41180 1078 aa10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 GCGRP47871 477 aa10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 SEC24CP53992 1094 aa10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 RRADP55042 308 aa10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 YBX1P67809 324 aaKnown RBP10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 OCRLQ01968 901 aa10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 KLRB1Q12918 225 aa10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 NAE1Q13564 534 aa10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 E2F2Q14209 437 aa10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 GRM7Q14831 915 aa10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 NKAIN1Q4KMZ8 207 aa10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 C1orf189Q5VU69 101 aa10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 MLIPQ5VWP3 458 aa10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 METTL2BQ6P1Q9 378 aaKnown RBP10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 SUSD1Q6UWL2 747 aa10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 MED25Q71SY5 747 aa10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 GOLGA7Q7Z5G4 137 aa10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 TCAIMQ8N3R3 496 aa10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 GBP7Q8N8V2 638 aaPredicted RBP10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 TMEM102Q8N9M5 508 aaPredicted RBP10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 TTC29Q8NA56 475 aaPredicted RBP10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 RAB3IL1Q8TBN0 382 aa10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 SREK1Q8WXA9 508 aaKnown RBP10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 CCDC126Q96EE4 140 aa10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 HIST1H2AHQ96KK5 128 aa10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 ZNF285Q96NJ3 590 aa10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 HIST1H2AJQ99878 128 aa10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 H2AFJQ9BTM1 129 aa10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 TRIM54Q9BYV2 358 aa10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 ING2Q9H160 280 aa10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 WWOXQ9NZC7 414 aa10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 ANKMY1Q9P2S6 941 aa10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 G3BP2Q9UN86 482 aaKnown RBP10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 PCDHGA9Q9Y5G4 932 aaKnown RBP10.07□□□□□ -0.8
SCAMP4-208ENST00000489554 BSNQ9UPA5 3926 aa10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 OR2A25A4D2G3 310 aa10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 FITM1A5D6W6 292 aa10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 K7EPI3 171 aa10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 DSCR3O14972 297 aa10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 NPHS1O60500 1241 aa10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 CTSVO60911 334 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms