RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 BLACEA4D250 179 aa8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 H3BMH7 237 aa8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 PGRMC1O00264 195 aaKnown RBP8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 EIF3FO00303 357 aaPredicted RBP8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 PRRG2O14669 202 aa8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 NIPSNAP2O75323 286 aa8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 MATN4O95460 622 aa8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 HIST1H2AGP0C0S8 130 aaPredicted RBP8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 MPC1LP0DKB6 136 aa8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 ICAM2P13598 275 aa8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 BMP7P18075 431 aa8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 HIST1H2ADP20671 130 aa8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 CXCR5P32302 372 aa8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 SKIV2L2P42285 1042 aaKnown RBP8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 AVPR1BP47901 424 aa8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 RGS4P49798 205 aa8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 TERF1P54274 439 aa8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 PNLIPRP1P54315 467 aa8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 PPP1R7Q15435 360 aa8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 TRIP13Q15645 432 aaPredicted RBP8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 LONRF1Q17RB8 773 aa8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 KLHL38Q2WGJ6 581 aa8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 GARNL3Q5VVW2 1013 aa8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 FCRL6Q6DN72 434 aa8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 CCDC137Q6PK04 289 aaKnown RBP8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 PPP1R32Q7Z5V6 425 aa8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 ADCK2Q7Z695 626 aa8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 TBC1D19Q8N5T2 526 aa8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 RBMXL3Q8N7X1 1067 aaKnown RBP8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 SSC4DQ8WTU2 575 aa8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 LPGAT1Q92604 370 aa8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 ANP32BQ92688 251 aaKnown RBP8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 INPP5DQ92835 1189 aa8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 ZNF669Q96BR6 464 aaPredicted RBP8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 HIST1H2AHQ96KK5 128 aa8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 NRTNQ99748 197 aa8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 HIST1H2AJQ99878 128 aa8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 H2AFJQ9BTM1 129 aa8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 DPH7Q9BTV6 452 aa8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 MENTQ9BUN1 341 aa8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 TRIM54Q9BYV2 358 aa8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 LHPPQ9H008 270 aa8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 PCBD2Q9H0N5 130 aa8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 C20orf96Q9NUD7 363 aaPredicted RBP8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 C14orf105Q9NVL8 296 aa8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 GFOD1Q9NXC2 390 aa8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 FBXL4Q9UKA2 621 aa8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 KLHL20Q9Y2M5 609 aa8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 PPP2R2CQ9Y2T4 447 aa8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 KLK4Q9Y5K2 254 aa8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 NFS1Q9Y697 457 aa8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 SHANK1Q9Y566 2161 aa8.42□□□□□ -1.06
TNRC6B-208ENST00000489500 CLEC18AA5D8T8 446 aa8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 GOLGA8KD6RF30 607 aa8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 GOLGA8TH3BQL2 631 aa8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 MYO1CO00159 1063 aa8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 PRICKLE3O43900 615 aaPredicted RBP8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 KIF5CO60282 957 aa8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 PSIP1O75475 530 aaKnown RBP8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 HPP00738 406 aa8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 UMODP07911 640 aa8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 EZRP15311 586 aaKnown RBP8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 CCND1P24385 295 aa8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 GRK3P35626 688 aa8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 COILP38432 576 aaPredicted RBP8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 MAGEA6P43360 314 aa8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 PER3P56645 1201 aa8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 SKP1P63208 163 aa8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 RELAQ04206 551 aa8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 PRDX1Q06830 199 aaKnown RBP8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 GRB7Q14451 532 aa8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 KCNJ11Q14654 390 aa8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 CTSL3PQ5NE16 218 aa8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 FAM69BQ5VUD6 431 aa8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 ZNF470Q6ECI4 717 aa8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 CES3Q6UWW8 571 aa8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 CLEC18BQ6UXF7 455 aa8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 RNF44Q7L0R7 432 aa8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 PPIL6Q8IXY8 311 aa8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 KBTBD2Q8IY47 623 aa8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 PRELID2Q8N945 189 aa8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 CLEC18CQ8NCF0 446 aa8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 OR2A1Q8NGT9 310 aa8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 SUN3Q8TAQ9 357 aa8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 DNAJB14Q8TBM8 379 aa8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 PPP4R1Q8TF05 950 aa8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 METTL21AQ8WXB1 218 aa8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 KCNJ9Q92806 393 aa8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 EAF1Q96JC9 268 aaPredicted RBP8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 ZNF285Q96NJ3 590 aa8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 BIRC8Q96P09 236 aa8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 LMF1Q96S06 567 aa8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 WDR77Q9BQA1 342 aaPredicted RBP8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 NAT9Q9BTE0 207 aa8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 ACAT2Q9BWD1 397 aa8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 FAM129AQ9BZQ8 928 aa8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 MKKSQ9NPJ1 570 aaPredicted RBP8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 LUZP4Q9P127 313 aa8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 TRMT6Q9UJA5 497 aaKnown RBP8.41□□□□□ -1.06
TNRC6B-208ENST00000489500 MAU2Q9Y6X3 613 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms