RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 AMIGO2Q86SJ2 522 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 PATL1Q86TB9 770 aaKnown RBP8.15□□□□□ -1.1
VTI1A-207ENST00000489357 SYT12Q8IV01 421 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 SFTPA1Q8IWL2 248 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 SPEM1Q8N4L4 309 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 CBR4Q8N4T8 237 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 OXR1Q8N573 874 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 OR9A1PQ8NGU1 263 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 ADAMTS16Q8TE57 1224 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 SORCS1Q8WY21 1168 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 RAD51AP1Q96B01 352 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 FAM120BQ96EK7 910 aaKnown RBP8.15□□□□□ -1.1
VTI1A-207ENST00000489357 RMND5BQ96G75 393 aaPredicted RBP8.15□□□□□ -1.1
VTI1A-207ENST00000489357 AURKBQ96GD4 344 aaPredicted RBP8.15□□□□□ -1.1
VTI1A-207ENST00000489357 COX14Q96I36 57 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 HIC2Q96JB3 615 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 CNBD2Q96M20 576 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 RNF145Q96MT1 663 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 FAM129BQ96TA1 746 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 HBEGFQ99075 208 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 ADI1Q9BV57 179 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 PCBD2Q9H0N5 130 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 SEMA6AQ9H2E6 1030 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 PRMT8Q9NR22 394 aaPredicted RBP8.15□□□□□ -1.1
VTI1A-207ENST00000489357 DCAF13Q9NV06 445 aaKnown RBP8.15□□□□□ -1.1
VTI1A-207ENST00000489357 ATAD3AQ9NVI7 634 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 FAM86C1Q9NVL1 165 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 DDX18Q9NVP1 670 aaKnown RBP8.15□□□□□ -1.1
VTI1A-207ENST00000489357 UBAP1Q9NZ09 502 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 USE1Q9NZ43 259 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 SLAMF8Q9P0V8 285 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 THAP10Q9P2Z0 257 aaPredicted RBP8.15□□□□□ -1.1
VTI1A-207ENST00000489357 OAZ3Q9UMX2 235 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 DMTF1Q9Y222 760 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 DLGAP4Q9Y2H0 992 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 SDK1Q7Z5N4 2213 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 A0A087WXM4 84 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 PRRT4C9JH25 899 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 ZNF701M0R085 212 aaPredicted RBP8.14□□□□□ -1.11
VTI1A-207ENST00000489357 CXCR6O00574 342 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 RNASET2O00584 256 aaKnown RBP8.14□□□□□ -1.11
VTI1A-207ENST00000489357 SOCS2O14508 198 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 ACOX3O15254 700 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 DFNA5O60443 496 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 EPN2O95208 641 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 BMP10O95393 424 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 ERGP11308 486 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 MTHFD1P11586 935 aaKnown RBP8.14□□□□□ -1.11
VTI1A-207ENST00000489357 ZNF23P17027 643 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 KELP23276 732 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 CXCR2P25025 360 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 PTPN6P29350 595 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 CAPGP40121 348 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 MAGEA2P43356 314 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 GZMMP51124 257 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 ALDH3A2P51648 485 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 CTSCP53634 463 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 MTPNP58546 118 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 MRPS21P82921 87 aaKnown RBP8.14□□□□□ -1.11
VTI1A-207ENST00000489357 SEMG2Q02383 582 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 SFSWAPQ12872 951 aaKnown RBP8.14□□□□□ -1.11
VTI1A-207ENST00000489357 IL18R1Q13478 541 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 NAE1Q13564 534 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 LRRC32Q14392 662 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 NRF1Q16656 503 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 ZNF528Q3MIS6 628 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 SGO1Q5FBB7 561 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 ZC3H12BQ5HYM0 836 aaKnown RBP8.14□□□□□ -1.11
VTI1A-207ENST00000489357 LRRC73Q5JTD7 316 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 RNF220Q5VTB9 566 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 RAET1GQ6H3X3 334 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 LCTLQ6UWM7 567 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 PDZD3Q86UT5 571 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 ZDHHC13Q8IUH4 622 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 EPHX4Q8IUS5 362 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 DCUN1D3Q8IWE4 304 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 MSRB3Q8IXL7 192 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 GALNT15Q8N3T1 639 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 ZCCHC7Q8N3Z6 543 aaKnown RBP8.14□□□□□ -1.11
VTI1A-207ENST00000489357 DHRSXQ8N5I4 330 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 TSPAN14Q8NG11 270 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 OR7G3Q8NG95 312 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 CXorf40AQ8TE69 158 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 CHTF18Q8WVB6 975 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 ARRDC3Q96B67 414 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 COQ8BQ96D53 544 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 ZNF764Q96H86 408 aaPredicted RBP8.14□□□□□ -1.11
VTI1A-207ENST00000489357 CNTNAP3BQ96NU0 1288 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 PKP4Q99569 1192 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 SLC29A1Q99808 456 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 CNTNAP3Q9BZ76 1288 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 BHLHE41Q9C0J9 482 aaPredicted RBP8.14□□□□□ -1.11
VTI1A-207ENST00000489357 NT5DC2Q9H857 520 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 RMI1Q9H9A7 625 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 VCX3AQ9NNX9 186 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 C2orf42Q9NWW7 574 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 SLC25A37Q9NYZ2 338 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 SPATA7Q9P0W8 599 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 IFT80Q9P2H3 777 aaPredicted RBP8.14□□□□□ -1.11
VTI1A-207ENST00000489357 ZNHIT2Q9UHR6 403 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms