RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 RNF38Q9H0F5 515 aa17.07■□□□□ 0.32
NPHP4-209ENST00000489180 FAM120CQ9NX05 1096 aaKnown RBP17.07■□□□□ 0.32
NPHP4-209ENST00000489180 B4DGG1 531 aa17.06■□□□□ 0.32
NPHP4-209ENST00000489180 SLC6A9P48067 706 aa17.06■□□□□ 0.32
NPHP4-209ENST00000489180 MOGSQ13724 837 aa17.06■□□□□ 0.32
NPHP4-209ENST00000489180 THEM6Q8WUY1 208 aa17.06■□□□□ 0.32
NPHP4-209ENST00000489180 ZUFSPQ96AP4 578 aa17.06■□□□□ 0.32
NPHP4-209ENST00000489180 OR51I1Q9H343 314 aa17.06■□□□□ 0.32
NPHP4-209ENST00000489180 METTL8Q9H825 291 aaKnown RBP17.06■□□□□ 0.32
NPHP4-209ENST00000489180 NFAT5O94916 1531 aa17.06■□□□□ 0.32
NPHP4-209ENST00000489180 TLX3O43711 291 aaPredicted RBP17.06■□□□□ 0.32
NPHP4-209ENST00000489180 RLN2P04090 185 aa17.06■□□□□ 0.32
NPHP4-209ENST00000489180 EIF1AXP47813 144 aaKnown RBP17.06■□□□□ 0.32
NPHP4-209ENST00000489180 NFATC2Q13469 925 aa17.06■□□□□ 0.32
NPHP4-209ENST00000489180 TMED4Q7Z7H5 227 aa17.06■□□□□ 0.32
NPHP4-209ENST00000489180 SMG9Q9H0W8 520 aaKnown RBP17.06■□□□□ 0.32
NPHP4-209ENST00000489180 CYTH4Q9UIA0 394 aa17.06■□□□□ 0.32
NPHP4-209ENST00000489180 ROBO1Q9Y6N7 1651 aa17.06■□□□□ 0.32
NPHP4-209ENST00000489180 PEAK1Q9H792 1746 aa17.06■□□□□ 0.32
NPHP4-209ENST00000489180 TRAV6A0A075B6T7 132 aa17.06■□□□□ 0.32
NPHP4-209ENST00000489180 RNF144AP50876 292 aaPredicted RBP17.06■□□□□ 0.32
NPHP4-209ENST00000489180 GSCP56915 257 aaPredicted RBP17.06■□□□□ 0.32
NPHP4-209ENST00000489180 LRRTM4Q86VH4 590 aa17.06■□□□□ 0.32
NPHP4-209ENST00000489180 JAGN1Q8N5M9 183 aa17.06■□□□□ 0.32
NPHP4-209ENST00000489180 CRTAC1Q9NQ79 661 aa17.06■□□□□ 0.32
NPHP4-209ENST00000489180 ERVK-11Q9UQG0 969 aa17.06■□□□□ 0.32
NPHP4-209ENST00000489180 MEMO1Q9Y316 297 aa17.06■□□□□ 0.32
NPHP4-209ENST00000489180 TMEM150CB9EJG8 249 aa17.06■□□□□ 0.32
NPHP4-209ENST00000489180 HLA-DPB1P04440 258 aa17.06■□□□□ 0.32
NPHP4-209ENST00000489180 MAPK14Q16539 360 aa17.06■□□□□ 0.32
NPHP4-209ENST00000489180 DGLUCYQ7Z3D6 616 aa17.06■□□□□ 0.32
NPHP4-209ENST00000489180 PAQR7Q86WK9 346 aa17.06■□□□□ 0.32
NPHP4-209ENST00000489180 NAXEQ8NCW5 288 aa17.06■□□□□ 0.32
NPHP4-209ENST00000489180 CCDC107Q8WV48 283 aa17.06■□□□□ 0.32
NPHP4-209ENST00000489180 DGAT2Q96PD7 388 aa17.06■□□□□ 0.32
NPHP4-209ENST00000489180 MRM3Q9HC36 420 aaKnown RBP17.06■□□□□ 0.32
NPHP4-209ENST00000489180 TMEM248Q9NWD8 314 aa17.06■□□□□ 0.32
NPHP4-209ENST00000489180 CLCA3PQ9Y6N3 262 aa17.06■□□□□ 0.32
NPHP4-209ENST00000489180 GLTPD2A6NH11 291 aa17.05■□□□□ 0.32
NPHP4-209ENST00000489180 GRXCR1A8MXD5 290 aa17.05■□□□□ 0.32
NPHP4-209ENST00000489180 SDHDO14521 159 aa17.05■□□□□ 0.32
NPHP4-209ENST00000489180 FSHRP23945 695 aa17.05■□□□□ 0.32
NPHP4-209ENST00000489180 RASGEF1BQ0VAM2 473 aa17.05■□□□□ 0.32
NPHP4-209ENST00000489180 TPGS2Q68CL5 300 aa17.05■□□□□ 0.32
NPHP4-209ENST00000489180 SLC5A11Q8WWX8 675 aa17.05■□□□□ 0.32
NPHP4-209ENST00000489180 ARNTL2Q8WYA1 636 aa17.05■□□□□ 0.32
NPHP4-209ENST00000489180 FKBP14Q9NWM8 211 aa17.05■□□□□ 0.32
NPHP4-209ENST00000489180 ISPDA4D126 451 aa17.05■□□□□ 0.32
NPHP4-209ENST00000489180 EIF1AYO14602 144 aaKnown RBP17.05■□□□□ 0.32
NPHP4-209ENST00000489180 GABBR2O75899 941 aa17.05■□□□□ 0.32
NPHP4-209ENST00000489180 PRLP01236 227 aa17.05■□□□□ 0.32
NPHP4-209ENST00000489180 CKMT1AP12532 417 aa17.05■□□□□ 0.32
NPHP4-209ENST00000489180 STOMP27105 288 aa17.05■□□□□ 0.32
NPHP4-209ENST00000489180 GRK5P34947 590 aa17.05■□□□□ 0.32
NPHP4-209ENST00000489180 PTGR1Q14914 329 aa17.05■□□□□ 0.32
NPHP4-209ENST00000489180 ZNF101Q8IZC7 436 aa17.05■□□□□ 0.32
NPHP4-209ENST00000489180 LMO3Q8TAP4 145 aa17.05■□□□□ 0.32
NPHP4-209ENST00000489180 ELOVL2Q9NXB9 296 aa17.05■□□□□ 0.32
NPHP4-209ENST00000489180 PTBP2Q9UKA9 531 aaKnown RBP17.05■□□□□ 0.32
NPHP4-209ENST00000489180 PRAMEF11O60813 436 aa17.05■□□□□ 0.32
NPHP4-209ENST00000489180 APOL3O95236 402 aa17.05■□□□□ 0.32
NPHP4-209ENST00000489180 ZNF280AP59817 542 aaPredicted RBP17.05■□□□□ 0.32
NPHP4-209ENST00000489180 INCA1Q0VD86 236 aa17.05■□□□□ 0.32
NPHP4-209ENST00000489180 ST3GAL3Q11203 375 aa17.05■□□□□ 0.32
NPHP4-209ENST00000489180 RELL1Q8IUW5 271 aa17.05■□□□□ 0.32
NPHP4-209ENST00000489180 FAM46DQ8NEK8 389 aa17.05■□□□□ 0.32
NPHP4-209ENST00000489180 DHRS1Q96LJ7 313 aa17.05■□□□□ 0.32
NPHP4-209ENST00000489180 KCNK6Q9Y257 313 aa17.05■□□□□ 0.32
NPHP4-209ENST00000489180 NOTOA8MTQ0 251 aa17.05■□□□□ 0.32
NPHP4-209ENST00000489180 RCBTB2O95199 551 aa17.05■□□□□ 0.32
NPHP4-209ENST00000489180 RAB36O95755 333 aa17.05■□□□□ 0.32
NPHP4-209ENST00000489180 CYB5AP00167 134 aa17.05■□□□□ 0.32
NPHP4-209ENST00000489180 DNAJB1P25685 340 aa17.05■□□□□ 0.32
NPHP4-209ENST00000489180 S100A10P60903 97 aa17.05■□□□□ 0.32
NPHP4-209ENST00000489180 MAB21L1Q13394 359 aa17.05■□□□□ 0.32
NPHP4-209ENST00000489180 ATP6AP1Q15904 470 aa17.05■□□□□ 0.32
NPHP4-209ENST00000489180 C6orf136Q5SQH8 315 aa17.05■□□□□ 0.32
NPHP4-209ENST00000489180 OR4E2Q8NGC2 313 aa17.05■□□□□ 0.32
NPHP4-209ENST00000489180 DPYSL5Q9BPU6 564 aa17.05■□□□□ 0.32
NPHP4-209ENST00000489180 ERVK-18Q9QC07 812 aa17.05■□□□□ 0.32
NPHP4-209ENST00000489180 FARSAQ9Y285 508 aaKnown RBP17.05■□□□□ 0.32
NPHP4-209ENST00000489180 PCDHGB1Q9Y5G3 927 aa17.05■□□□□ 0.32
NPHP4-209ENST00000489180 PRSS51A0A1B0GVH4 220 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 TMEM88BA6NKF7 163 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 FAM189A1O60320 539 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 MRPL3P09001 348 aaKnown RBP17.04■□□□□ 0.32
NPHP4-209ENST00000489180 ADH5P11766 374 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 CBLP22681 906 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 MAGEA12P43365 314 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 BRAT1Q6PJG6 821 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 TAS1R3Q7RTX0 852 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 HIST1H2AAQ96QV6 131 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 C14orf119Q9NWQ9 140 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 PITX1P78337 314 aaPredicted RBP17.04■□□□□ 0.32
NPHP4-209ENST00000489180 CD47Q08722 323 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 KCNAB2Q13303 367 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 LASP1Q14847 261 aaKnown RBP17.04■□□□□ 0.32
NPHP4-209ENST00000489180 HMGN2P46Q86SG4 172 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 CEP97Q8IW35 865 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 DTX3Q8N9I9 347 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms