RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 OR52B6Q8NGF0 335 aa15.2■□□□□ 0.02
HDAC7-224ENST00000488927 CREB3L4Q8TEY5 395 aa15.2■□□□□ 0.02
HDAC7-224ENST00000488927 ATP6V1G3Q96LB4 118 aa15.2■□□□□ 0.02
HDAC7-224ENST00000488927 C10orf90Q96M02 699 aa15.2■□□□□ 0.02
HDAC7-224ENST00000488927 SH3GL2Q99962 352 aa15.2■□□□□ 0.02
HDAC7-224ENST00000488927 PRM3Q9NNZ6 103 aa15.2■□□□□ 0.02
HDAC7-224ENST00000488927 TRPS1Q9UHF7 1281 aa15.2■□□□□ 0.02
HDAC7-224ENST00000488927 FREM2Q5SZK8 3169 aa15.2■□□□□ 0.02
HDAC7-224ENST00000488927 TEX51A0A1B0GUA7 166 aa15.19■□□□□ 0.02
HDAC7-224ENST00000488927 HMGB1P1B2RPK0 211 aaPredicted RBP15.19■□□□□ 0.02
HDAC7-224ENST00000488927 C9J4A7 227 aa15.19■□□□□ 0.02
HDAC7-224ENST00000488927 H0YIG0 161 aa15.19■□□□□ 0.02
HDAC7-224ENST00000488927 BIRC5O15392 142 aa15.19■□□□□ 0.02
HDAC7-224ENST00000488927 KLK10O43240 276 aa15.19■□□□□ 0.02
HDAC7-224ENST00000488927 ONECUT2O95948 504 aa15.19■□□□□ 0.02
HDAC7-224ENST00000488927 BPGMP07738 259 aa15.19■□□□□ 0.02
HDAC7-224ENST00000488927 PCNAP12004 261 aa15.19■□□□□ 0.02
HDAC7-224ENST00000488927 ALDH3A1P30838 453 aa15.19■□□□□ 0.02
HDAC7-224ENST00000488927 AVPR1BP47901 424 aa15.19■□□□□ 0.02
HDAC7-224ENST00000488927 CYP4F2P78329 520 aa15.19■□□□□ 0.02
HDAC7-224ENST00000488927 TGM3Q08188 693 aa15.19■□□□□ 0.02
HDAC7-224ENST00000488927 CPSF6Q16630 551 aaKnown RBP eCLIP15.19■□□□□ 0.02
HDAC7-224ENST00000488927 NKAIN1Q4KMZ8 207 aa15.19■□□□□ 0.02
HDAC7-224ENST00000488927 BROXQ5VW32 411 aa15.19■□□□□ 0.02
HDAC7-224ENST00000488927 ZNF385CQ66K41 422 aaPredicted RBP15.19■□□□□ 0.02
HDAC7-224ENST00000488927 FRMD7Q6ZUT3 714 aa15.19■□□□□ 0.02
HDAC7-224ENST00000488927 GPRIN3Q6ZVF9 776 aa15.19■□□□□ 0.02
HDAC7-224ENST00000488927 ARHGEF39Q8N4T4 335 aa15.19■□□□□ 0.02
HDAC7-224ENST00000488927 OR4F6Q8NGB9 312 aa15.19■□□□□ 0.02
HDAC7-224ENST00000488927 CCT6BQ92526 530 aa15.19■□□□□ 0.02
HDAC7-224ENST00000488927 ZBTB9Q96C00 473 aa15.19■□□□□ 0.02
HDAC7-224ENST00000488927 CNDP1Q96KN2 507 aa15.19■□□□□ 0.02
HDAC7-224ENST00000488927 CDK15Q96Q40 435 aa15.19■□□□□ 0.02
HDAC7-224ENST00000488927 GPR87Q9BY21 358 aa15.19■□□□□ 0.02
HDAC7-224ENST00000488927 SLC6A16Q9GZN6 736 aa15.19■□□□□ 0.02
HDAC7-224ENST00000488927 GSTO2Q9H4Y5 243 aa15.19■□□□□ 0.02
HDAC7-224ENST00000488927 ANKHQ9HCJ1 492 aa15.19■□□□□ 0.02
HDAC7-224ENST00000488927 PSD3Q9NYI0 1048 aa15.19■□□□□ 0.02
HDAC7-224ENST00000488927 NKIRAS1Q9NYS0 192 aa15.19■□□□□ 0.02
HDAC7-224ENST00000488927 KCND3Q9UK17 655 aa15.19■□□□□ 0.02
HDAC7-224ENST00000488927 SNX6Q9UNH7 406 aa15.19■□□□□ 0.02
HDAC7-224ENST00000488927 RAXQ9Y2V3 346 aa15.19■□□□□ 0.02
HDAC7-224ENST00000488927 RNF11Q9Y3C5 154 aa15.19■□□□□ 0.02
HDAC7-224ENST00000488927 A0A087WV48 116 aa15.18■□□□□ 0.02
HDAC7-224ENST00000488927 A0A088AWK7 358 aa15.18■□□□□ 0.02
HDAC7-224ENST00000488927 TMEM120BA0PK00 339 aa15.18■□□□□ 0.02
HDAC7-224ENST00000488927 NSA2O95478 260 aaKnown RBP15.18■□□□□ 0.02
HDAC7-224ENST00000488927 ESRRBO95718 433 aa15.18■□□□□ 0.02
HDAC7-224ENST00000488927 ENO1P06733 434 aaKnown RBP15.18■□□□□ 0.02
HDAC7-224ENST00000488927 RAB40ALP0C0E4 278 aa15.18■□□□□ 0.02
HDAC7-224ENST00000488927 ZNF10P21506 573 aaPredicted RBP15.18■□□□□ 0.02
HDAC7-224ENST00000488927 SERPINB4P48594 390 aa15.18■□□□□ 0.02
HDAC7-224ENST00000488927 UCNP55089 124 aa15.18■□□□□ 0.02
HDAC7-224ENST00000488927 RPS15P62841 145 aaKnown RBP15.18■□□□□ 0.02
HDAC7-224ENST00000488927 IFT88Q13099 833 aa15.18■□□□□ 0.02
HDAC7-224ENST00000488927 ZRSR2Q15696 482 aaKnown RBP15.18■□□□□ 0.02
HDAC7-224ENST00000488927 TMEM35AQ53FP2 167 aa15.18■□□□□ 0.02
HDAC7-224ENST00000488927 C1orf189Q5VU69 101 aa15.18■□□□□ 0.02
HDAC7-224ENST00000488927 FRG2Q64ET8 278 aa15.18■□□□□ 0.02
HDAC7-224ENST00000488927 TTC19Q6DKK2 380 aaPredicted RBP15.18■□□□□ 0.02
HDAC7-224ENST00000488927 CHSY3Q70JA7 882 aa15.18■□□□□ 0.02
HDAC7-224ENST00000488927 RPS27LQ71UM5 84 aaKnown RBP15.18■□□□□ 0.02
HDAC7-224ENST00000488927 NUDCD3Q8IVD9 361 aa15.18■□□□□ 0.02
HDAC7-224ENST00000488927 KCT2Q8NC54 265 aa15.18■□□□□ 0.02
HDAC7-224ENST00000488927 SRFBP1Q8NEF9 429 aaKnown RBP15.18■□□□□ 0.02
HDAC7-224ENST00000488927 ZNF473Q8WTR7 871 aaKnown RBP15.18■□□□□ 0.02
HDAC7-224ENST00000488927 FKBP10Q96AY3 582 aa15.18■□□□□ 0.02
HDAC7-224ENST00000488927 CMTM7Q96FZ5 175 aa15.18■□□□□ 0.02
HDAC7-224ENST00000488927 NAF1Q96HR8 494 aaKnown RBP15.18■□□□□ 0.02
HDAC7-224ENST00000488927 FRG2BQ96QU4 278 aa15.18■□□□□ 0.02
HDAC7-224ENST00000488927 CENPKQ9BS16 269 aa15.18■□□□□ 0.02
HDAC7-224ENST00000488927 SLC29A3Q9BZD2 475 aa15.18■□□□□ 0.02
HDAC7-224ENST00000488927 CHST8Q9H2A9 424 aa15.18■□□□□ 0.02
HDAC7-224ENST00000488927 ELOVL6Q9H5J4 265 aa15.18■□□□□ 0.02
HDAC7-224ENST00000488927 GPN2Q9H9Y4 310 aaPredicted RBP15.18■□□□□ 0.02
HDAC7-224ENST00000488927 CLK4Q9HAZ1 481 aaKnown RBP15.18■□□□□ 0.02
HDAC7-224ENST00000488927 EML4Q9HC35 981 aaKnown RBP15.18■□□□□ 0.02
HDAC7-224ENST00000488927 ZNF304Q9HCX3 659 aa15.18■□□□□ 0.02
HDAC7-224ENST00000488927 IFT80Q9P2H3 777 aaPredicted RBP15.18■□□□□ 0.02
HDAC7-224ENST00000488927 GPN3Q9UHW5 284 aaPredicted RBP15.18■□□□□ 0.02
HDAC7-224ENST00000488927 PPT2Q9UMR5 302 aa15.18■□□□□ 0.02
HDAC7-224ENST00000488927 PADI2Q9Y2J8 665 aa15.18■□□□□ 0.02
HDAC7-224ENST00000488927 SDK2Q58EX2 2172 aa15.17■□□□□ 0.02
HDAC7-224ENST00000488927 LRIT2A6NDA9 550 aa15.17■□□□□ 0.02
HDAC7-224ENST00000488927 FOXE1O00358 373 aaPredicted RBP15.17■□□□□ 0.02
HDAC7-224ENST00000488927 NPHS1O60500 1241 aa15.17■□□□□ 0.02
HDAC7-224ENST00000488927 KRT6AP02538 564 aa15.17■□□□□ 0.02
HDAC7-224ENST00000488927 ALBP02768 609 aa15.17■□□□□ 0.02
HDAC7-224ENST00000488927 STATHP02808 62 aa15.17■□□□□ 0.02
HDAC7-224ENST00000488927 KRT6BP04259 564 aa15.17■□□□□ 0.02
HDAC7-224ENST00000488927 DHRS4L1P0CG22 281 aa15.17■□□□□ 0.02
HDAC7-224ENST00000488927 ALOX12P18054 663 aa15.17■□□□□ 0.02
HDAC7-224ENST00000488927 TSPAN8P19075 237 aa15.17■□□□□ 0.02
HDAC7-224ENST00000488927 TCN2P20062 427 aa15.17■□□□□ 0.02
HDAC7-224ENST00000488927 DLSTP36957 453 aa15.17■□□□□ 0.02
HDAC7-224ENST00000488927 KRT6CP48668 564 aa15.17■□□□□ 0.02
HDAC7-224ENST00000488927 ZNF33BQ06732 778 aa15.17■□□□□ 0.02
HDAC7-224ENST00000488927 GALNT1Q10472 559 aaPredicted RBP15.17■□□□□ 0.02
HDAC7-224ENST00000488927 DSG2Q14126 1118 aa15.17■□□□□ 0.02
HDAC7-224ENST00000488927 TGIF1Q15583 401 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms