RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 SCYL1Q96KG9 808 aa15.19■□□□□ 0.02
ERGIC3-216ENST00000488384 MRPL46Q9H2W6 279 aaKnown RBP15.19■□□□□ 0.02
ERGIC3-216ENST00000488384 SOX17Q9H6I2 414 aaPredicted RBP15.19■□□□□ 0.02
ERGIC3-216ENST00000488384 PPCSQ9HAB8 311 aa15.19■□□□□ 0.02
ERGIC3-216ENST00000488384 ZNF282Q9UDV7 671 aaPredicted RBP15.19■□□□□ 0.02
ERGIC3-216ENST00000488384 ZNF462Q96JM2 2506 aa15.19■□□□□ 0.02
ERGIC3-216ENST00000488384 SMIM23A6NLE4 172 aa15.18■□□□□ 0.02
ERGIC3-216ENST00000488384 H0YIG0 161 aa15.18■□□□□ 0.02
ERGIC3-216ENST00000488384 SIX3O95343 332 aaPredicted RBP15.18■□□□□ 0.02
ERGIC3-216ENST00000488384 SERPIND1P05546 499 aa15.18■□□□□ 0.02
ERGIC3-216ENST00000488384 NUDT17P0C025 328 aa15.18■□□□□ 0.02
ERGIC3-216ENST00000488384 SBK3P0C264 359 aa15.18■□□□□ 0.02
ERGIC3-216ENST00000488384 CXCR2P25025 360 aa15.18■□□□□ 0.02
ERGIC3-216ENST00000488384 AVPR1BP47901 424 aa15.18■□□□□ 0.02
ERGIC3-216ENST00000488384 MAT1AQ00266 395 aaKnown RBP15.18■□□□□ 0.02
ERGIC3-216ENST00000488384 RGS1Q08116 209 aa15.18■□□□□ 0.02
ERGIC3-216ENST00000488384 PCDH1Q08174 1060 aa15.18■□□□□ 0.02
ERGIC3-216ENST00000488384 CHIT1Q13231 466 aa15.18■□□□□ 0.02
ERGIC3-216ENST00000488384 ATP1A4Q13733 1029 aa15.18■□□□□ 0.02
ERGIC3-216ENST00000488384 SSPNQ14714 243 aa15.18■□□□□ 0.02
ERGIC3-216ENST00000488384 PCBP2Q15366 365 aaKnown RBP eCLIP15.18■□□□□ 0.022e-38■■□□□ 13.2
ERGIC3-216ENST00000488384 TBCCQ15814 346 aa15.18■□□□□ 0.02
ERGIC3-216ENST00000488384 SYT16Q17RD7 645 aa15.18■□□□□ 0.02
ERGIC3-216ENST00000488384 XKR6Q5GH73 641 aa15.18■□□□□ 0.02
ERGIC3-216ENST00000488384 ADNP2Q6IQ32 1131 aa15.18■□□□□ 0.02
ERGIC3-216ENST00000488384 SHISA6Q6ZSJ9 500 aa15.18■□□□□ 0.02
ERGIC3-216ENST00000488384 VN1R5Q7Z5H4 357 aa15.18■□□□□ 0.02
ERGIC3-216ENST00000488384 SHISA5Q8N114 240 aa15.18■□□□□ 0.02
ERGIC3-216ENST00000488384 KRT78Q8N1N4 520 aa15.18■□□□□ 0.02
ERGIC3-216ENST00000488384 TMEM151AQ8N4L1 468 aa15.18■□□□□ 0.02
ERGIC3-216ENST00000488384 OR2W6PQ8NHA6 318 aa15.18■□□□□ 0.02
ERGIC3-216ENST00000488384 ACMSDQ8TDX5 336 aa15.18■□□□□ 0.02
ERGIC3-216ENST00000488384 APOBEC4Q8WW27 367 aaKnown RBP15.18■□□□□ 0.02
ERGIC3-216ENST00000488384 MRPL57Q9BQC6 102 aaKnown RBP15.18■□□□□ 0.02
ERGIC3-216ENST00000488384 ARHGAP9Q9BRR9 750 aa15.18■□□□□ 0.02
ERGIC3-216ENST00000488384 EFCAB11Q9BUY7 163 aa15.18■□□□□ 0.02
ERGIC3-216ENST00000488384 PARD6BQ9BYG5 372 aa15.18■□□□□ 0.02
ERGIC3-216ENST00000488384 SLC6A16Q9GZN6 736 aa15.18■□□□□ 0.02
ERGIC3-216ENST00000488384 PITHD1Q9GZP4 211 aaPredicted RBP15.18■□□□□ 0.02
ERGIC3-216ENST00000488384 AICDAQ9GZX7 198 aa15.18■□□□□ 0.02
ERGIC3-216ENST00000488384 NT5DC2Q9H857 520 aa15.18■□□□□ 0.02
ERGIC3-216ENST00000488384 TRPC4Q9UBN4 977 aa15.18■□□□□ 0.02
ERGIC3-216ENST00000488384 MAP4K5Q9Y4K4 846 aa15.18■□□□□ 0.02
ERGIC3-216ENST00000488384 SLC22A7Q9Y694 548 aa15.18■□□□□ 0.02
ERGIC3-216ENST00000488384 NUP210LQ5VU65 1888 aa15.17■□□□□ 0.02
ERGIC3-216ENST00000488384 ARGFXA6NJG6 315 aa15.17■□□□□ 0.02
ERGIC3-216ENST00000488384 FOXO6A8MYZ6 492 aa15.17■□□□□ 0.02
ERGIC3-216ENST00000488384 C4orf51C9J302 202 aa15.17■□□□□ 0.02
ERGIC3-216ENST00000488384 GOLGA8RI6L899 631 aa15.17■□□□□ 0.02
ERGIC3-216ENST00000488384 SGK494L7N484 410 aa15.17■□□□□ 0.02
ERGIC3-216ENST00000488384 H2AFYO75367 372 aaKnown RBP15.17■□□□□ 0.02
ERGIC3-216ENST00000488384 RDH16O75452 317 aa15.17■□□□□ 0.02
ERGIC3-216ENST00000488384 WFS1O76024 890 aa15.17■□□□□ 0.02
ERGIC3-216ENST00000488384 KLHL18O94889 574 aa15.17■□□□□ 0.02
ERGIC3-216ENST00000488384 ZGLP1P0C6A0 271 aa15.17■□□□□ 0.02
ERGIC3-216ENST00000488384 ZNF888P0CJ79 500 aaPredicted RBP15.17■□□□□ 0.02
ERGIC3-216ENST00000488384 PYGBP11216 843 aa15.17■□□□□ 0.02
ERGIC3-216ENST00000488384 EPB42P16452 691 aa15.17■□□□□ 0.02
ERGIC3-216ENST00000488384 CASP2P42575 452 aa15.17■□□□□ 0.02
ERGIC3-216ENST00000488384 IRF8Q02556 426 aa15.17■□□□□ 0.02
ERGIC3-216ENST00000488384 OCA2Q04671 838 aa15.17■□□□□ 0.02
ERGIC3-216ENST00000488384 KLC1Q07866 573 aa15.17■□□□□ 0.02
ERGIC3-216ENST00000488384 CHAF1BQ13112 559 aa15.17■□□□□ 0.02
ERGIC3-216ENST00000488384 RASA2Q15283 850 aa15.17■□□□□ 0.02
ERGIC3-216ENST00000488384 VWA2Q5GFL6 755 aa15.17■□□□□ 0.02
ERGIC3-216ENST00000488384 GOLGA7Q7Z5G4 137 aa15.17■□□□□ 0.02
ERGIC3-216ENST00000488384 ZC3H7AQ8IWR0 971 aaKnown RBP15.17■□□□□ 0.02
ERGIC3-216ENST00000488384 PRSS58Q8IYP2 241 aa15.17■□□□□ 0.02
ERGIC3-216ENST00000488384 CYP4X1Q8N118 509 aa15.17■□□□□ 0.02
ERGIC3-216ENST00000488384 CNPY4Q8N129 248 aa15.17■□□□□ 0.02
ERGIC3-216ENST00000488384 TEX9Q8N6V9 391 aa15.17■□□□□ 0.02
ERGIC3-216ENST00000488384 TRPV3Q8NET8 790 aa15.17■□□□□ 0.02
ERGIC3-216ENST00000488384 TTLQ8NG68 377 aa15.17■□□□□ 0.02
ERGIC3-216ENST00000488384 MIEF2Q96C03 454 aa15.17■□□□□ 0.02
ERGIC3-216ENST00000488384 TRIM55Q9BYV6 548 aa15.17■□□□□ 0.02
ERGIC3-216ENST00000488384 ANKHQ9HCJ1 492 aa15.17■□□□□ 0.02
ERGIC3-216ENST00000488384 MKKSQ9NPJ1 570 aaPredicted RBP15.17■□□□□ 0.02
ERGIC3-216ENST00000488384 TMEM216Q9P0N5 145 aa15.17■□□□□ 0.02
ERGIC3-216ENST00000488384 HCN3Q9P1Z3 774 aa15.17■□□□□ 0.02
ERGIC3-216ENST00000488384 ZNF490Q9ULM2 529 aaPredicted RBP15.17■□□□□ 0.02
ERGIC3-216ENST00000488384 TMCO1Q9UM00 188 aa15.17■□□□□ 0.02
ERGIC3-216ENST00000488384 NAALAD2Q9Y3Q0 740 aa15.17■□□□□ 0.02
ERGIC3-216ENST00000488384 BSNQ9UPA5 3926 aa15.17■□□□□ 0.02
ERGIC3-216ENST00000488384 TLN1Q9Y490 2541 aaKnown RBP15.16■□□□□ 0.02
ERGIC3-216ENST00000488384 BOD1L1Q8NFC6 3051 aa15.16■□□□□ 0.02
ERGIC3-216ENST00000488384 A0A1W2PPM1 405 aa15.16■□□□□ 0.02
ERGIC3-216ENST00000488384 ZNF860A6NHJ4 632 aa15.16■□□□□ 0.02
ERGIC3-216ENST00000488384 A8MT66 165 aa15.16■□□□□ 0.02
ERGIC3-216ENST00000488384 STX16-NPEPL1H3BU86 382 aa15.16■□□□□ 0.02
ERGIC3-216ENST00000488384 E2F3O00716 465 aa15.16■□□□□ 0.02
ERGIC3-216ENST00000488384 STX16O14662 325 aa15.16■□□□□ 0.02
ERGIC3-216ENST00000488384 GALR3O60755 368 aaPredicted RBP15.16■□□□□ 0.02
ERGIC3-216ENST00000488384 SMIM24O75264 130 aa15.16■□□□□ 0.02
ERGIC3-216ENST00000488384 CDH16O75309 829 aa15.16■□□□□ 0.02
ERGIC3-216ENST00000488384 DNAJB5O75953 348 aa15.16■□□□□ 0.02
ERGIC3-216ENST00000488384 TBX6O95947 436 aaPredicted RBP15.16■□□□□ 0.02
ERGIC3-216ENST00000488384 B3GALT4O96024 378 aa15.16■□□□□ 0.02
ERGIC3-216ENST00000488384 SERPINA6P08185 405 aa15.16■□□□□ 0.02
ERGIC3-216ENST00000488384 ALOX12P18054 663 aa15.16■□□□□ 0.02
ERGIC3-216ENST00000488384 MMP11P24347 488 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms