RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 SVOPQ8N4V2 548 aa25.13■■□□□ 1.61
HLA-C-208ENST00000487245 WDR34Q96EX3 536 aa25.13■■□□□ 1.61
HLA-C-208ENST00000487245 EPYCQ99645 322 aa25.13■■□□□ 1.61
HLA-C-208ENST00000487245 CCDC90BQ9GZT6 254 aa25.13■■□□□ 1.61
HLA-C-208ENST00000487245 REEP1Q9H902 201 aa25.13■■□□□ 1.61
HLA-C-208ENST00000487245 SAMHD1Q9Y3Z3 626 aaKnown RBP25.13■■□□□ 1.61
HLA-C-208ENST00000487245 CORINQ9Y5Q5 1042 aa25.13■■□□□ 1.61
HLA-C-208ENST00000487245 C1orf226A1L170 272 aa25.13■■□□□ 1.61
HLA-C-208ENST00000487245 MYO1GB0I1T2 1018 aa25.13■■□□□ 1.61
HLA-C-208ENST00000487245 C5orf67F2Z3F1 127 aa25.13■■□□□ 1.61
HLA-C-208ENST00000487245 hCG_2039718K7EN88 272 aa25.13■■□□□ 1.61
HLA-C-208ENST00000487245 CPSF4O95639 269 aaKnown RBP25.13■■□□□ 1.61
HLA-C-208ENST00000487245 LAMP1P11279 417 aa25.13■■□□□ 1.61
HLA-C-208ENST00000487245 PDHA2P29803 388 aa25.13■■□□□ 1.61
HLA-C-208ENST00000487245 RXRGP48443 463 aa25.13■■□□□ 1.61
HLA-C-208ENST00000487245 RAE1P78406 368 aaKnown RBP25.13■■□□□ 1.61
HLA-C-208ENST00000487245 SIM2Q14190 667 aaPredicted RBP25.13■■□□□ 1.61
HLA-C-208ENST00000487245 ZNF846Q147U1 533 aa25.13■■□□□ 1.61
HLA-C-208ENST00000487245 NR1D2Q14995 579 aa25.13■■□□□ 1.61
HLA-C-208ENST00000487245 MAD2L1BPQ15013 274 aaPredicted RBP25.13■■□□□ 1.61
HLA-C-208ENST00000487245 FNDC3BQ53EP0 1204 aaKnown RBP25.13■■□□□ 1.61
HLA-C-208ENST00000487245 CPTPQ5TA50 214 aa25.13■■□□□ 1.61
HLA-C-208ENST00000487245 KIAA1614Q5VZ46 1190 aa25.13■■□□□ 1.61
HLA-C-208ENST00000487245 CLECL1Q8IZS7 167 aa25.13■■□□□ 1.61
HLA-C-208ENST00000487245 COQ8BQ96D53 544 aa25.13■■□□□ 1.61
HLA-C-208ENST00000487245 CXorf40BQ96DE9 158 aa25.13■■□□□ 1.61
HLA-C-208ENST00000487245 NUS1Q96E22 293 aa25.13■■□□□ 1.61
HLA-C-208ENST00000487245 DYRK1BQ9Y463 629 aa25.13■■□□□ 1.61
HLA-C-208ENST00000487245 YY2O15391 372 aa25.12■■□□□ 1.61
HLA-C-208ENST00000487245 C9P02748 559 aa25.12■■□□□ 1.61
HLA-C-208ENST00000487245 ANXA4P09525 319 aaPredicted RBP25.12■■□□□ 1.61
HLA-C-208ENST00000487245 LAIR1Q6GTX8 287 aa25.12■■□□□ 1.61
HLA-C-208ENST00000487245 VTCN1Q7Z7D3 282 aa25.12■■□□□ 1.61
HLA-C-208ENST00000487245 C12orf40Q86WS4 652 aa25.12■■□□□ 1.61
HLA-C-208ENST00000487245 ETFBKMTQ8IXQ9 262 aa25.12■■□□□ 1.61
HLA-C-208ENST00000487245 CFAP206Q8IYR0 622 aa25.12■■□□□ 1.61
HLA-C-208ENST00000487245 C1orf52Q8N6N3 182 aaKnown RBP25.12■■□□□ 1.61
HLA-C-208ENST00000487245 VN1R2Q8NFZ6 395 aa25.12■■□□□ 1.61
HLA-C-208ENST00000487245 HUS1BQ8NHY5 278 aa25.12■■□□□ 1.61
HLA-C-208ENST00000487245 IPCEF1Q8WWN9 437 aaPredicted RBP25.12■■□□□ 1.61
HLA-C-208ENST00000487245 BADQ92934 168 aa25.12■■□□□ 1.61
HLA-C-208ENST00000487245 C7orf34Q96L11 122 aa25.12■■□□□ 1.61
HLA-C-208ENST00000487245 EFCAB11Q9BUY7 163 aa25.12■■□□□ 1.61
HLA-C-208ENST00000487245 SIRT5Q9NXA8 310 aa25.12■■□□□ 1.61
HLA-C-208ENST00000487245 PRKAG2Q9UGJ0 569 aa25.12■■□□□ 1.61
HLA-C-208ENST00000487245 NUP210Q8TEM1 1887 aaPredicted RBP25.11■■□□□ 1.61
HLA-C-208ENST00000487245 C17orf113A0A1B0GUU1 675 aa25.11■■□□□ 1.61
HLA-C-208ENST00000487245 LILRB5O75023 590 aa25.11■■□□□ 1.61
HLA-C-208ENST00000487245 NFATC1O95644 943 aa25.11■■□□□ 1.61
HLA-C-208ENST00000487245 RB1P06400 928 aa25.11■■□□□ 1.61
HLA-C-208ENST00000487245 HNRNPCP07910 306 aaKnown RBP eCLIP25.11■■□□□ 1.61
HLA-C-208ENST00000487245 TFPTP0C1Z6 253 aa25.11■■□□□ 1.61
HLA-C-208ENST00000487245 FMO3P31513 532 aa25.11■■□□□ 1.61
HLA-C-208ENST00000487245 PCGF2P35227 344 aa25.11■■□□□ 1.61
HLA-C-208ENST00000487245 CSNK2BP67870 215 aa25.11■■□□□ 1.61
HLA-C-208ENST00000487245 DPTQ07507 201 aa25.11■■□□□ 1.61
HLA-C-208ENST00000487245 HNRNPA1L2Q32P51 320 aaKnown RBP25.11■■□□□ 1.61
HLA-C-208ENST00000487245 TCEAL5Q5H9L2 206 aa25.11■■□□□ 1.61
HLA-C-208ENST00000487245 CENPSQ8N2Z9 138 aa25.11■■□□□ 1.61
HLA-C-208ENST00000487245 ARRDC3Q96B67 414 aa25.11■■□□□ 1.61
HLA-C-208ENST00000487245 SH3YL1Q96HL8 342 aaPredicted RBP25.11■■□□□ 1.61
HLA-C-208ENST00000487245 PPP1R16AQ96I34 528 aa25.11■■□□□ 1.61
HLA-C-208ENST00000487245 LINC00615Q96LM1 132 aaPredicted RBP25.11■■□□□ 1.61
HLA-C-208ENST00000487245 TRIM39Q9HCM9 518 aa25.11■■□□□ 1.61
HLA-C-208ENST00000487245 ITM2CQ9NQX7 267 aa25.11■■□□□ 1.61
HLA-C-208ENST00000487245 KRT84Q9NSB2 600 aa25.11■■□□□ 1.61
HLA-C-208ENST00000487245 LINC01553A4QN01 128 aa25.11■■□□□ 1.61
HLA-C-208ENST00000487245 MGAT4DA6NG13 374 aa25.11■■□□□ 1.61
HLA-C-208ENST00000487245 FOXE1O00358 373 aaPredicted RBP25.11■■□□□ 1.61
HLA-C-208ENST00000487245 SPINT1O43278 529 aa25.11■■□□□ 1.61
HLA-C-208ENST00000487245 SOD1P00441 154 aa25.11■■□□□ 1.61
HLA-C-208ENST00000487245 GPR1P46091 355 aa25.11■■□□□ 1.61
HLA-C-208ENST00000487245 OCA2Q04671 838 aa25.11■■□□□ 1.61
HLA-C-208ENST00000487245 EIF4HQ15056 248 aaKnown RBP25.11■■□□□ 1.61
HLA-C-208ENST00000487245 PAGE2BQ5JRK9 111 aa25.11■■□□□ 1.61
HLA-C-208ENST00000487245 C9orf64Q5T6V5 341 aa25.11■■□□□ 1.61
HLA-C-208ENST00000487245 PDE12Q6L8Q7 609 aaKnown RBP25.11■■□□□ 1.61
HLA-C-208ENST00000487245 OR9A1PQ8NGU1 263 aa25.11■■□□□ 1.61
HLA-C-208ENST00000487245 ZFP90Q8TF47 636 aa25.11■■□□□ 1.61
HLA-C-208ENST00000487245 ZNF480Q8WV37 535 aa25.11■■□□□ 1.61
HLA-C-208ENST00000487245 FOXJ1Q92949 421 aa25.11■■□□□ 1.61
HLA-C-208ENST00000487245 SH3KBP1Q96B97 665 aa25.11■■□□□ 1.61
HLA-C-208ENST00000487245 SIGLEC11Q96RL6 698 aa25.11■■□□□ 1.61
HLA-C-208ENST00000487245 GABARAPL3Q9BY60 117 aa25.11■■□□□ 1.61
HLA-C-208ENST00000487245 EHD1Q9H4M9 534 aa25.11■■□□□ 1.61
HLA-C-208ENST00000487245 THUMPD1Q9NXG2 353 aaKnown RBP25.11■■□□□ 1.61
HLA-C-208ENST00000487245 BTBD3Q9Y2F9 522 aa25.11■■□□□ 1.61
HLA-C-208ENST00000487245 CLDN25C9JDP6 229 aa25.1■■□□□ 1.61
HLA-C-208ENST00000487245 J3QRK9 145 aa25.1■■□□□ 1.61
HLA-C-208ENST00000487245 OCM2P0CE71 109 aa25.1■■□□□ 1.61
HLA-C-208ENST00000487245 OCMP0CE72 109 aaPredicted RBP25.1■■□□□ 1.61
HLA-C-208ENST00000487245 EFNA1P20827 205 aaPredicted RBP25.1■■□□□ 1.61
HLA-C-208ENST00000487245 IDSP22304 550 aa25.1■■□□□ 1.61
HLA-C-208ENST00000487245 TIA1P31483 386 aaKnown RBP eCLIP25.1■■□□□ 1.61
HLA-C-208ENST00000487245 PHEXP78562 749 aa25.1■■□□□ 1.61
HLA-C-208ENST00000487245 CAMK1Q14012 370 aa25.1■■□□□ 1.61
HLA-C-208ENST00000487245 HIST2H2ACQ16777 129 aaPredicted RBP25.1■■□□□ 1.61
HLA-C-208ENST00000487245 HIST2H2AA3Q6FI13 130 aa25.1■■□□□ 1.61
HLA-C-208ENST00000487245 NPAS3Q8IXF0 933 aa25.1■■□□□ 1.61
HLA-C-208ENST00000487245 SYTL1Q8IYJ3 562 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms