RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 ABCB10Q9NRK6 738 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 FAM120CQ9NX05 1096 aaKnown RBP12.76□□□□□ -0.37
HMGN1-216ENST00000486741 ATXN10Q9UBB4 475 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 A0A1W2PQU0 124 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 TRBC2A0A5B9 178 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 A6NHS1 94 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 ACOT8O14734 319 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 NT5EP21589 574 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 IL12AP29459 219 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 CMPK1P30085 196 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 ID2Q02363 134 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 XKR5Q6UX68 686 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 CCDC103Q8IW40 242 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 PACRGLQ8N7B6 248 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 ASB11Q8WXH4 323 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 FATE1Q969F0 183 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 COLEC10Q9Y6Z7 277 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 A0A096LPI6 279 aa12.75□□□□□ -0.37
HMGN1-216ENST00000486741 PIPSLA2A3N6 862 aa12.75□□□□□ -0.37
HMGN1-216ENST00000486741 TAPBPO15533 448 aa12.75□□□□□ -0.37
HMGN1-216ENST00000486741 NPPAP01160 153 aa12.75□□□□□ -0.37
HMGN1-216ENST00000486741 MYL12AP19105 171 aa12.75□□□□□ -0.37
HMGN1-216ENST00000486741 NUDT13Q86X67 352 aa12.75□□□□□ -0.37
HMGN1-216ENST00000486741 CLIP4Q8N3C7 705 aa12.75□□□□□ -0.37
HMGN1-216ENST00000486741 TMEM151AQ8N4L1 468 aa12.75□□□□□ -0.37
HMGN1-216ENST00000486741 PSMA8Q8TAA3 256 aa12.75□□□□□ -0.37
HMGN1-216ENST00000486741 ZBED6CLQ96FA7 236 aaPredicted RBP12.75□□□□□ -0.37
HMGN1-216ENST00000486741 ABHD8Q96I13 439 aa12.75□□□□□ -0.37
HMGN1-216ENST00000486741 NUAK2Q9H093 628 aa12.75□□□□□ -0.37
HMGN1-216ENST00000486741 C3orf14Q9HBI5 128 aa12.75□□□□□ -0.37
HMGN1-216ENST00000486741 C8orf4Q9NR00 106 aa12.75□□□□□ -0.37
HMGN1-216ENST00000486741 PTTG2Q9NZH5 202 aa12.75□□□□□ -0.37
HMGN1-216ENST00000486741 MAT2BQ9NZL9 334 aa12.75□□□□□ -0.37
HMGN1-216ENST00000486741 ZNF860A6NHJ4 632 aa12.75□□□□□ -0.37
HMGN1-216ENST00000486741 LRRC72A6NJI9 287 aa12.75□□□□□ -0.37
HMGN1-216ENST00000486741 AP3D1O14617 1153 aa12.75□□□□□ -0.37
HMGN1-216ENST00000486741 SOX14O95416 240 aa12.75□□□□□ -0.37
HMGN1-216ENST00000486741 B3GALT4O96024 378 aa12.75□□□□□ -0.37
HMGN1-216ENST00000486741 FESP07332 822 aa12.75□□□□□ -0.37
HMGN1-216ENST00000486741 TIA1P31483 386 aaKnown RBP eCLIP12.75□□□□□ -0.372e-6■■□□□ 12.1
HMGN1-216ENST00000486741 SOX6P35712 828 aa12.75□□□□□ -0.37
HMGN1-216ENST00000486741 DSTNP60981 165 aa12.75□□□□□ -0.37
HMGN1-216ENST00000486741 SLC9A5Q14940 896 aa12.75□□□□□ -0.37
HMGN1-216ENST00000486741 DCST1Q5T197 706 aa12.75□□□□□ -0.37
HMGN1-216ENST00000486741 SIX5Q8N196 739 aa12.75□□□□□ -0.37
HMGN1-216ENST00000486741 DEPDC4Q8N2C3 294 aa12.75□□□□□ -0.37
HMGN1-216ENST00000486741 SPPL3Q8TCT6 385 aa12.75□□□□□ -0.37
HMGN1-216ENST00000486741 STON2Q8WXE9 905 aa12.75□□□□□ -0.37
HMGN1-216ENST00000486741 SLC2A11Q9BYW1 496 aa12.75□□□□□ -0.37
HMGN1-216ENST00000486741 RPS6KB2Q9UBS0 482 aa12.75□□□□□ -0.37
HMGN1-216ENST00000486741 NEU3Q9UQ49 428 aa12.75□□□□□ -0.37
HMGN1-216ENST00000486741 ARID2Q68CP9 1835 aa12.75□□□□□ -0.37
HMGN1-216ENST00000486741 OR52A4PA6NMU1 304 aa12.75□□□□□ -0.37
HMGN1-216ENST00000486741 GMFGO60234 142 aa12.75□□□□□ -0.37
HMGN1-216ENST00000486741 OCM2P0CE71 109 aa12.75□□□□□ -0.37
HMGN1-216ENST00000486741 OCMP0CE72 109 aaPredicted RBP12.75□□□□□ -0.37
HMGN1-216ENST00000486741 ZNF10P21506 573 aaPredicted RBP12.75□□□□□ -0.37
HMGN1-216ENST00000486741 LASP1Q14847 261 aaKnown RBP12.75□□□□□ -0.37
HMGN1-216ENST00000486741 NPTX1Q15818 432 aa12.75□□□□□ -0.37
HMGN1-216ENST00000486741 ITPRIPL2Q3MIP1 535 aa12.75□□□□□ -0.37
HMGN1-216ENST00000486741 MYDGFQ969H8 173 aa12.75□□□□□ -0.37
HMGN1-216ENST00000486741 RNF31Q96EP0 1072 aa12.75□□□□□ -0.37
HMGN1-216ENST00000486741 LRIG1Q96JA1 1093 aa12.75□□□□□ -0.37
HMGN1-216ENST00000486741 REEP4Q9H6H4 257 aa12.75□□□□□ -0.37
HMGN1-216ENST00000486741 PDE9AO76083 593 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 DNAJA1P31689 397 aaKnown RBP12.74□□□□□ -0.37
HMGN1-216ENST00000486741 GSTM5P46439 218 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 RNF144AP50876 292 aaPredicted RBP12.74□□□□□ -0.37
HMGN1-216ENST00000486741 MYBPC1Q00872 1141 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 ZNF551Q7Z340 670 aaPredicted RBP12.74□□□□□ -0.37
HMGN1-216ENST00000486741 COMMD6Q7Z4G1 85 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 VN1R5Q7Z5H4 357 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 ZSWIM9Q86XI8 627 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 CDK20Q8IZL9 346 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 AHCYL2Q96HN2 611 aaKnown RBP12.74□□□□□ -0.37
HMGN1-216ENST00000486741 SLC35G5Q96KT7 338 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 CHCHD6Q9BRQ6 235 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 DNAAF2Q9NVR5 837 aaKnown RBP12.74□□□□□ -0.37
HMGN1-216ENST00000486741 UTS2RQ9UKP6 389 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 PCDHGB3Q9Y5G1 929 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 SNTNA6NMZ2 147 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 FADS2P1A8MWK0 482 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 DENRO43583 198 aaKnown RBP12.74□□□□□ -0.37
HMGN1-216ENST00000486741 NUDT14O95848 222 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 GGT1P19440 569 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 ZNF776Q68DI1 518 aaPredicted RBP12.74□□□□□ -0.37
HMGN1-216ENST00000486741 OR52E8Q6IFG1 317 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 WDR36Q8NI36 951 aaKnown RBP12.74□□□□□ -0.37
HMGN1-216ENST00000486741 GTF2H4Q92759 462 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 RGMAQ96B86 450 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 ART5Q96L15 291 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 COPS4Q9BT78 406 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 CPEB1Q9BZB8 566 aaKnown RBP12.74□□□□□ -0.37
HMGN1-216ENST00000486741 OR10H1Q9Y4A9 318 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 TCRBV3S1A0A5B6 114 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 KMOO15229 486 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 RASAL1O95294 804 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 CXCL10P02778 98 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 TSPAN19P0C672 248 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 PAICSP22234 425 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms