RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 ALOX12P18054 663 aa11.86□□□□□ -0.51
PTCD1-205ENST00000485746 GGT5P36269 586 aa11.86□□□□□ -0.51
PTCD1-205ENST00000485746 XCR1P46094 333 aa11.86□□□□□ -0.51
PTCD1-205ENST00000485746 KCNC1P48547 511 aa11.86□□□□□ -0.51
PTCD1-205ENST00000485746 STXBP1P61764 594 aaKnown RBP11.86□□□□□ -0.51
PTCD1-205ENST00000485746 IRF8Q02556 426 aa11.86□□□□□ -0.51
PTCD1-205ENST00000485746 EEF1A2Q05639 463 aaKnown RBP11.86□□□□□ -0.51
PTCD1-205ENST00000485746 LAPTM5Q13571 262 aa11.86□□□□□ -0.51
PTCD1-205ENST00000485746 ACAP2Q15057 778 aa11.86□□□□□ -0.51
PTCD1-205ENST00000485746 PAGE2BQ5JRK9 111 aa11.86□□□□□ -0.51
PTCD1-205ENST00000485746 TOR1AIP1Q5JTV8 583 aa11.86□□□□□ -0.51
PTCD1-205ENST00000485746 COLEC12Q5KU26 742 aa11.86□□□□□ -0.51
PTCD1-205ENST00000485746 NIPAL1Q6NVV3 410 aa11.86□□□□□ -0.51
PTCD1-205ENST00000485746 KIRREL2Q6UWL6 708 aa11.86□□□□□ -0.51
PTCD1-205ENST00000485746 TMIGD1Q6UXZ0 262 aa11.86□□□□□ -0.51
PTCD1-205ENST00000485746 SLCO4C1Q6ZQN7 724 aa11.86□□□□□ -0.51
PTCD1-205ENST00000485746 PRSS41Q7RTY9 318 aa11.86□□□□□ -0.51
PTCD1-205ENST00000485746 LRRC70Q7Z2Q7 622 aa11.86□□□□□ -0.51
PTCD1-205ENST00000485746 LAPTM4BQ86VI4 370 aa11.86□□□□□ -0.51
PTCD1-205ENST00000485746 KLHDC8AQ8IYD2 350 aa11.86□□□□□ -0.51
PTCD1-205ENST00000485746 AMER3Q8N944 861 aa11.86□□□□□ -0.51
PTCD1-205ENST00000485746 NT5CQ8TCD5 201 aa11.86□□□□□ -0.51
PTCD1-205ENST00000485746 MOCOSQ96EN8 888 aa11.86□□□□□ -0.51
PTCD1-205ENST00000485746 FAR2Q96K12 515 aa11.86□□□□□ -0.51
PTCD1-205ENST00000485746 TMEM79Q9BSE2 394 aa11.86□□□□□ -0.51
PTCD1-205ENST00000485746 SARGQ9BW04 601 aa11.86□□□□□ -0.51
PTCD1-205ENST00000485746 CD244Q9BZW8 370 aa11.86□□□□□ -0.51
PTCD1-205ENST00000485746 CPSF2Q9P2I0 782 aaKnown RBP11.86□□□□□ -0.51
PTCD1-205ENST00000485746 ANAPC2Q9UJX6 822 aa11.86□□□□□ -0.51
PTCD1-205ENST00000485746 NAALAD2Q9Y3Q0 740 aa11.86□□□□□ -0.51
PTCD1-205ENST00000485746 PCDHGB7Q9Y5F8 929 aa11.86□□□□□ -0.51
PTCD1-205ENST00000485746 HS3ST3B1Q9Y662 390 aa11.86□□□□□ -0.51
PTCD1-205ENST00000485746 SLC22A7Q9Y694 548 aa11.86□□□□□ -0.51
PTCD1-205ENST00000485746 CACNA1GO43497 2377 aa11.86□□□□□ -0.51
PTCD1-205ENST00000485746 MGAQ8IWI9 3026 aa11.86□□□□□ -0.51
PTCD1-205ENST00000485746 IGLV3-12A0A075B6K2 115 aa11.85□□□□□ -0.51
PTCD1-205ENST00000485746 NSG1A0A0A6YYJ2 146 aa11.85□□□□□ -0.51
PTCD1-205ENST00000485746 CCDC189A1A4V9 331 aa11.85□□□□□ -0.51
PTCD1-205ENST00000485746 TRIM49D1C9J1S8 452 aa11.85□□□□□ -0.51
PTCD1-205ENST00000485746 J3QKU1 62 aa11.85□□□□□ -0.51
PTCD1-205ENST00000485746 SUV39H1O43463 412 aa11.85□□□□□ -0.51
PTCD1-205ENST00000485746 DPM1O60762 260 aa11.85□□□□□ -0.51
PTCD1-205ENST00000485746 ALOX12BO75342 701 aa11.85□□□□□ -0.51
PTCD1-205ENST00000485746 BMP10O95393 424 aa11.85□□□□□ -0.51
PTCD1-205ENST00000485746 ALDOAP04075 364 aaKnown RBP11.85□□□□□ -0.51
PTCD1-205ENST00000485746 SERPINA6P08185 405 aa11.85□□□□□ -0.51
PTCD1-205ENST00000485746 SNRPAP09012 282 aaKnown RBP11.85□□□□□ -0.51
PTCD1-205ENST00000485746 RBP1P09455 135 aa11.85□□□□□ -0.51
PTCD1-205ENST00000485746 FAM153BP0C7A2 387 aa11.85□□□□□ -0.51
PTCD1-205ENST00000485746 SPTBP11277 2137 aa11.85□□□□□ -0.51
PTCD1-205ENST00000485746 PLA2G2AP14555 144 aa11.85□□□□□ -0.51
PTCD1-205ENST00000485746 AGTR2P50052 363 aa11.85□□□□□ -0.51
PTCD1-205ENST00000485746 RAB8AP61006 207 aa11.85□□□□□ -0.51
PTCD1-205ENST00000485746 PFKFB4Q16877 469 aa11.85□□□□□ -0.51
PTCD1-205ENST00000485746 FAM153CQ494X1 144 aa11.85□□□□□ -0.51
PTCD1-205ENST00000485746 DEFB134Q4QY38 66 aa11.85□□□□□ -0.51
PTCD1-205ENST00000485746 VWA5B1Q5TIE3 1220 aa11.85□□□□□ -0.51
PTCD1-205ENST00000485746 ZC3H7AQ8IWR0 971 aaKnown RBP11.85□□□□□ -0.51
PTCD1-205ENST00000485746 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.85□□□□□ -0.51
PTCD1-205ENST00000485746 ARHGEF39Q8N4T4 335 aa11.85□□□□□ -0.51
PTCD1-205ENST00000485746 ANKRD53Q8N9V6 530 aa11.85□□□□□ -0.51
PTCD1-205ENST00000485746 LRRN4CLQ8ND94 238 aa11.85□□□□□ -0.51
PTCD1-205ENST00000485746 C8orf44Q96CB5 159 aa11.85□□□□□ -0.51
PTCD1-205ENST00000485746 PTCD3Q96EY7 689 aaKnown RBP11.85□□□□□ -0.51
PTCD1-205ENST00000485746 PEX11GQ96HA9 241 aa11.85□□□□□ -0.51
PTCD1-205ENST00000485746 ATOH8Q96SQ7 321 aa11.85□□□□□ -0.51
PTCD1-205ENST00000485746 NUDT9Q9BW91 350 aa11.85□□□□□ -0.51
PTCD1-205ENST00000485746 TGIF2Q9GZN2 237 aa11.85□□□□□ -0.51
PTCD1-205ENST00000485746 ZNF180Q9UJW8 692 aa11.85□□□□□ -0.51
PTCD1-205ENST00000485746 HMX2A2RU54 273 aa11.84□□□□□ -0.51
PTCD1-205ENST00000485746 K7EPI3 171 aa11.84□□□□□ -0.51
PTCD1-205ENST00000485746 PSMD12O00232 456 aaPredicted RBP11.84□□□□□ -0.51
PTCD1-205ENST00000485746 PCDH17O14917 1159 aa11.84□□□□□ -0.51
PTCD1-205ENST00000485746 RIPK2O43353 540 aa11.84□□□□□ -0.51
PTCD1-205ENST00000485746 SMIM24O75264 130 aa11.84□□□□□ -0.51
PTCD1-205ENST00000485746 CEACAM4O75871 244 aa11.84□□□□□ -0.51
PTCD1-205ENST00000485746 HPP00738 406 aa11.84□□□□□ -0.51
PTCD1-205ENST00000485746 ABHD2P08910 425 aa11.84□□□□□ -0.51
PTCD1-205ENST00000485746 C8orf89P0DMQ9 161 aa11.84□□□□□ -0.51
PTCD1-205ENST00000485746 PCNAP12004 261 aa11.84□□□□□ -0.51
PTCD1-205ENST00000485746 EPB42P16452 691 aa11.84□□□□□ -0.51
PTCD1-205ENST00000485746 HPDP32754 393 aaPredicted RBP11.84□□□□□ -0.51
PTCD1-205ENST00000485746 ARL1P40616 181 aaPredicted RBP11.84□□□□□ -0.51
PTCD1-205ENST00000485746 ACTN3Q08043 901 aaPredicted RBP11.84□□□□□ -0.51
PTCD1-205ENST00000485746 TGM3Q08188 693 aa11.84□□□□□ -0.51
PTCD1-205ENST00000485746 CHIT1Q13231 466 aa11.84□□□□□ -0.51
PTCD1-205ENST00000485746 DOC2AQ14183 400 aa11.84□□□□□ -0.51
PTCD1-205ENST00000485746 MYBPC3Q14896 1274 aa11.84□□□□□ -0.51
PTCD1-205ENST00000485746 TSNAXIP1Q2TAA8 658 aa11.84□□□□□ -0.51
PTCD1-205ENST00000485746 NDUFAF7Q7L592 441 aa11.84□□□□□ -0.51
PTCD1-205ENST00000485746 MYLK4Q86YV6 388 aaPredicted RBP11.84□□□□□ -0.51
PTCD1-205ENST00000485746 GSPT2Q8IYD1 628 aaKnown RBP11.84□□□□□ -0.51
PTCD1-205ENST00000485746 CENPLQ8N0S6 344 aaPredicted RBP11.84□□□□□ -0.51
PTCD1-205ENST00000485746 TEX9Q8N6V9 391 aa11.84□□□□□ -0.51
PTCD1-205ENST00000485746 OR11G2Q8NGC1 345 aa11.84□□□□□ -0.51
PTCD1-205ENST00000485746 RHEBL1Q8TAI7 183 aa11.84□□□□□ -0.51
PTCD1-205ENST00000485746 UTP15Q8TED0 518 aaKnown RBP11.84□□□□□ -0.51
PTCD1-205ENST00000485746 DCAKDQ8WVC6 231 aa11.84□□□□□ -0.51
PTCD1-205ENST00000485746 UBLCP1Q8WVY7 318 aaPredicted RBP11.84□□□□□ -0.51
PTCD1-205ENST00000485746 TM9SF4Q92544 642 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms