RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 M1APQ8TC57 530 aa16.16■□□□□ 0.18
SMC4-216ENST00000485645 FAM45AQ8TCE6 357 aa16.16■□□□□ 0.18
SMC4-216ENST00000485645 OR1F2PQ96R84 312 aa16.16■□□□□ 0.18
SMC4-216ENST00000485645 RBCK1Q9BYM8 510 aa16.16■□□□□ 0.18
SMC4-216ENST00000485645 TRMT1Q9NXH9 659 aaKnown RBP16.16■□□□□ 0.18
SMC4-216ENST00000485645 SLC17A6Q9P2U8 582 aa16.16■□□□□ 0.18
SMC4-216ENST00000485645 VWA7Q9Y334 891 aa16.16■□□□□ 0.18
SMC4-216ENST00000485645 MYO9AB2RTY4 2548 aa16.16■□□□□ 0.18
SMC4-216ENST00000485645 TRBC2A0A5B9 178 aa16.15■□□□□ 0.18
SMC4-216ENST00000485645 ZNF860A6NHJ4 632 aa16.15■□□□□ 0.18
SMC4-216ENST00000485645 CDC123O75794 336 aaPredicted RBP16.15■□□□□ 0.18
SMC4-216ENST00000485645 UNC5CO95185 931 aa16.15■□□□□ 0.18
SMC4-216ENST00000485645 GUCA1CO95843 209 aa16.15■□□□□ 0.18
SMC4-216ENST00000485645 SERPIND1P05546 499 aa16.15■□□□□ 0.18
SMC4-216ENST00000485645 ENO2P09104 434 aaPredicted RBP16.15■□□□□ 0.18
SMC4-216ENST00000485645 IVDP26440 423 aa16.15■□□□□ 0.18
SMC4-216ENST00000485645 ELK3P41970 407 aa16.15■□□□□ 0.18
SMC4-216ENST00000485645 PGGT1BP53609 377 aa16.15■□□□□ 0.18
SMC4-216ENST00000485645 SKP1P63208 163 aa16.15■□□□□ 0.18
SMC4-216ENST00000485645 RHAGQ02094 409 aa16.15■□□□□ 0.18
SMC4-216ENST00000485645 CSHL1Q14406 222 aa16.15■□□□□ 0.18
SMC4-216ENST00000485645 ABRAXAS2Q15018 415 aa16.15■□□□□ 0.18
SMC4-216ENST00000485645 MEP1AQ16819 746 aa16.15■□□□□ 0.18
SMC4-216ENST00000485645 SFT2D3Q587I9 215 aa16.15■□□□□ 0.18
SMC4-216ENST00000485645 HP1BP3Q5SSJ5 553 aaPredicted RBP16.15■□□□□ 0.18
SMC4-216ENST00000485645 PAPD4Q6PIY7 484 aaKnown RBP16.15■□□□□ 0.18
SMC4-216ENST00000485645 TMEM207Q6UWW9 146 aa16.15■□□□□ 0.18
SMC4-216ENST00000485645 BEST3Q8N1M1 668 aa16.15■□□□□ 0.18
SMC4-216ENST00000485645 AFAP1L2Q8N4X5 818 aa16.15■□□□□ 0.18
SMC4-216ENST00000485645 ZNF740Q8NDX6 193 aa16.15■□□□□ 0.18
SMC4-216ENST00000485645 OR5T3Q8NGG3 340 aa16.15■□□□□ 0.18
SMC4-216ENST00000485645 FBXL8Q96CD0 374 aa16.15■□□□□ 0.18
SMC4-216ENST00000485645 MOCOSQ96EN8 888 aa16.15■□□□□ 0.18
SMC4-216ENST00000485645 CFAP36Q96G28 342 aa16.15■□□□□ 0.18
SMC4-216ENST00000485645 OR4K3Q96R72 315 aa16.15■□□□□ 0.18
SMC4-216ENST00000485645 LPAR4Q99677 370 aa16.15■□□□□ 0.18
SMC4-216ENST00000485645 PLAC1Q9HBJ0 212 aa16.15■□□□□ 0.18
SMC4-216ENST00000485645 MMP25Q9NPA2 562 aa16.15■□□□□ 0.18
SMC4-216ENST00000485645 SEC14L3Q9UDX4 400 aa16.15■□□□□ 0.18
SMC4-216ENST00000485645 CHMP2BQ9UQN3 213 aa16.15■□□□□ 0.18
SMC4-216ENST00000485645 TRGV8A0A0C4DH27 118 aa16.14■□□□□ 0.17
SMC4-216ENST00000485645 MAGEB17A8MXT2 336 aa16.14■□□□□ 0.17
SMC4-216ENST00000485645 GALR3O60755 368 aaPredicted RBP16.14■□□□□ 0.17
SMC4-216ENST00000485645 TCP1P17987 556 aaKnown RBP16.14■□□□□ 0.17
SMC4-216ENST00000485645 ALOX12P18054 663 aa16.14■□□□□ 0.17
SMC4-216ENST00000485645 MST1P26927 711 aa16.14■□□□□ 0.17
SMC4-216ENST00000485645 SRSF11Q05519 484 aaKnown RBP16.14■□□□□ 0.17
SMC4-216ENST00000485645 RBPJQ06330 500 aa16.14■□□□□ 0.17
SMC4-216ENST00000485645 RGS1Q08116 209 aa16.14■□□□□ 0.17
SMC4-216ENST00000485645 MORF4L2Q15014 288 aa16.14■□□□□ 0.17
SMC4-216ENST00000485645 CATSPEREQ5SY80 951 aa16.14■□□□□ 0.17
SMC4-216ENST00000485645 NIPAL1Q6NVV3 410 aa16.14■□□□□ 0.17
SMC4-216ENST00000485645 STRA8Q7Z7C7 330 aa16.14■□□□□ 0.17
SMC4-216ENST00000485645 CRLF3Q8IUI8 442 aa16.14■□□□□ 0.17
SMC4-216ENST00000485645 SLC5A11Q8WWX8 675 aa16.14■□□□□ 0.17
SMC4-216ENST00000485645 PDLIM5Q96HC4 596 aaKnown RBP16.14■□□□□ 0.17
SMC4-216ENST00000485645 OLFM1Q99784 485 aa16.14■□□□□ 0.17
SMC4-216ENST00000485645 UTP23Q9BRU9 249 aaKnown RBP16.14■□□□□ 0.17
SMC4-216ENST00000485645 LANCL2Q9NS86 450 aa16.14■□□□□ 0.17
SMC4-216ENST00000485645 COPG2Q9UBF2 871 aa16.14■□□□□ 0.17
SMC4-216ENST00000485645 SUCOQ9UBS9 1254 aaKnown RBP16.14■□□□□ 0.17
SMC4-216ENST00000485645 ENTPD4Q9Y227 616 aa16.14■□□□□ 0.17
SMC4-216ENST00000485645 PCDHGB6Q9Y5F9 930 aa16.14■□□□□ 0.17
SMC4-216ENST00000485645 TTI1O43156 1089 aa16.13■□□□□ 0.17
SMC4-216ENST00000485645 FHP07954 510 aa16.13■□□□□ 0.17
SMC4-216ENST00000485645 JAK1P23458 1154 aa16.13■□□□□ 0.17
SMC4-216ENST00000485645 OR4D2P58180 307 aa16.13■□□□□ 0.17
SMC4-216ENST00000485645 PMP22Q01453 160 aa16.13■□□□□ 0.17
SMC4-216ENST00000485645 TUBA3CQ13748 450 aa16.13■□□□□ 0.17
SMC4-216ENST00000485645 USP10Q14694 798 aaKnown RBP16.13■□□□□ 0.17
SMC4-216ENST00000485645 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.13■□□□□ 0.17
SMC4-216ENST00000485645 DEFB134Q4QY38 66 aa16.13■□□□□ 0.17
SMC4-216ENST00000485645 SP5Q6BEB4 398 aaPredicted RBP16.13■□□□□ 0.17
SMC4-216ENST00000485645 TUBA3EQ6PEY2 450 aa16.13■□□□□ 0.17
SMC4-216ENST00000485645 TRMT10BQ6PF06 316 aaKnown RBP16.13■□□□□ 0.17
SMC4-216ENST00000485645 SYDE1Q6ZW31 735 aaPredicted RBP16.13■□□□□ 0.17
SMC4-216ENST00000485645 ABHD13Q7L211 337 aa16.13■□□□□ 0.17
SMC4-216ENST00000485645 TICAM1Q8IUC6 712 aa16.13■□□□□ 0.17
SMC4-216ENST00000485645 SLC5A8Q8N695 610 aa16.13■□□□□ 0.17
SMC4-216ENST00000485645 NT5CQ8TCD5 201 aa16.13■□□□□ 0.17
SMC4-216ENST00000485645 TSLPQ969D9 159 aa16.13■□□□□ 0.17
SMC4-216ENST00000485645 NEIL2Q969S2 332 aa16.13■□□□□ 0.17
SMC4-216ENST00000485645 TBC1D20Q96BZ9 403 aa16.13■□□□□ 0.17
SMC4-216ENST00000485645 LRRC39Q96DD0 335 aa16.13■□□□□ 0.17
SMC4-216ENST00000485645 PWWP2AQ96N64 755 aa16.13■□□□□ 0.17
SMC4-216ENST00000485645 ZFP69BQ9UJL9 534 aa16.13■□□□□ 0.17
SMC4-216ENST00000485645 TEX264Q9Y6I9 313 aa16.13■□□□□ 0.17
SMC4-216ENST00000485645 PRSS44E7EML9 344 aa16.12■□□□□ 0.17
SMC4-216ENST00000485645 HNRNPRO43390 633 aaKnown RBP16.12■□□□□ 0.17
SMC4-216ENST00000485645 CHST10O43529 356 aa16.12■□□□□ 0.17
SMC4-216ENST00000485645 ZNF888P0CJ79 500 aaPredicted RBP16.12■□□□□ 0.17
SMC4-216ENST00000485645 AHRP35869 848 aa16.12■□□□□ 0.17
SMC4-216ENST00000485645 CD96P40200 585 aa16.12■□□□□ 0.17
SMC4-216ENST00000485645 SCTRP47872 440 aa16.12■□□□□ 0.17
SMC4-216ENST00000485645 TAS2R50P59544 299 aa16.12■□□□□ 0.17
SMC4-216ENST00000485645 OLR1P78380 273 aa16.12■□□□□ 0.17
SMC4-216ENST00000485645 STEAP4Q687X5 459 aa16.12■□□□□ 0.17
SMC4-216ENST00000485645 SBSNQ6UWP8 590 aa16.12■□□□□ 0.17
SMC4-216ENST00000485645 KLHL7Q8IXQ5 586 aa16.12■□□□□ 0.17
SMC4-216ENST00000485645 MDS2Q8NDY4 140 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms