RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 CLEC3AO75596 197 aa15.08■□□□□ 0
UPF3A-208ENST00000484246 UMODP07911 640 aa15.08■□□□□ 0
UPF3A-208ENST00000484246 RPS17P08708 135 aaKnown RBP15.08■□□□□ 0
UPF3A-208ENST00000484246 SERPINB1P30740 379 aa15.08■□□□□ 0
UPF3A-208ENST00000484246 FOLR3P41439 243 aa15.08■□□□□ 0
UPF3A-208ENST00000484246 AVPR1BP47901 424 aa15.08■□□□□ 0
UPF3A-208ENST00000484246 SNRPNP63162 240 aaKnown RBP15.08■□□□□ 0
UPF3A-208ENST00000484246 SKP1P63208 163 aa15.08■□□□□ 0
UPF3A-208ENST00000484246 IRF8Q02556 426 aa15.08■□□□□ 0
UPF3A-208ENST00000484246 HYAL2Q12891 473 aa15.08■□□□□ 0
UPF3A-208ENST00000484246 CHIT1Q13231 466 aa15.08■□□□□ 0
UPF3A-208ENST00000484246 DOC2AQ14183 400 aa15.08■□□□□ 0
UPF3A-208ENST00000484246 ERV3-1Q14264 604 aa15.08■□□□□ 0
UPF3A-208ENST00000484246 SLC9A5Q14940 896 aa15.08■□□□□ 0
UPF3A-208ENST00000484246 HERC3Q15034 1050 aa15.08■□□□□ 0
UPF3A-208ENST00000484246 ADPRMQ3LIE5 342 aa15.08■□□□□ 0
UPF3A-208ENST00000484246 LINC00303Q3SY05 128 aa15.08■□□□□ 0
UPF3A-208ENST00000484246 XKR6Q5GH73 641 aa15.08■□□□□ 0
UPF3A-208ENST00000484246 ATP1A1-AS1Q5TC04 95 aa15.08■□□□□ 0
UPF3A-208ENST00000484246 C16orf46Q6P387 395 aa15.08■□□□□ 0
UPF3A-208ENST00000484246 APLFQ8IW19 511 aaPredicted RBP15.08■□□□□ 0
UPF3A-208ENST00000484246 LAS2Q8IYD9 372 aa15.08■□□□□ 0
UPF3A-208ENST00000484246 METTL27Q8N6F8 245 aaPredicted RBP15.08■□□□□ 0
UPF3A-208ENST00000484246 UBE2E3Q969T4 207 aa15.08■□□□□ 0
UPF3A-208ENST00000484246 SCYL1Q96KG9 808 aa15.08■□□□□ 0
UPF3A-208ENST00000484246 ROPN1BQ9BZX4 212 aaPredicted RBP15.08■□□□□ 0
UPF3A-208ENST00000484246 ROPN1Q9HAT0 212 aaPredicted RBP15.08■□□□□ 0
UPF3A-208ENST00000484246 MKKSQ9NPJ1 570 aaPredicted RBP15.08■□□□□ 0
UPF3A-208ENST00000484246 MKS1Q9NXB0 559 aa15.08■□□□□ 0
UPF3A-208ENST00000484246 TBK1Q9UHD2 729 aa15.08■□□□□ 0
UPF3A-208ENST00000484246 TUBD1Q9UJT1 453 aa15.08■□□□□ 0
UPF3A-208ENST00000484246 PTRH2Q9Y3E5 179 aaKnown RBP15.08■□□□□ 0
UPF3A-208ENST00000484246 MAU2Q9Y6X3 613 aa15.08■□□□□ 0
UPF3A-208ENST00000484246 A0A0A6YYC8 382 aaPredicted RBP15.07■□□□□ 0
UPF3A-208ENST00000484246 A0A1W2PQ72 361 aa15.07■□□□□ 0
UPF3A-208ENST00000484246 CDC14CA4D256 554 aa15.07■□□□□ 0
UPF3A-208ENST00000484246 URADA6NGE7 173 aa15.07■□□□□ 0
UPF3A-208ENST00000484246 I3L1I5 382 aaPredicted RBP15.07■□□□□ 0
UPF3A-208ENST00000484246 PCDH17O14917 1159 aa15.07■□□□□ 0
UPF3A-208ENST00000484246 GLRA3O75311 464 aa15.07■□□□□ 0
UPF3A-208ENST00000484246 SMIM10L1P0DMW3 83 aa15.07■□□□□ 0
UPF3A-208ENST00000484246 ALOX12P18054 663 aa15.07■□□□□ 0
UPF3A-208ENST00000484246 HPDP32754 393 aaPredicted RBP15.07■□□□□ 0
UPF3A-208ENST00000484246 SLCO1A2P46721 670 aa15.07■□□□□ 0
UPF3A-208ENST00000484246 GRHL2Q6ISB3 625 aa15.07■□□□□ 0
UPF3A-208ENST00000484246 ABHD13Q7L211 337 aa15.07■□□□□ 0
UPF3A-208ENST00000484246 VN1R5Q7Z5H4 357 aa15.07■□□□□ 0
UPF3A-208ENST00000484246 MRGPREQ86SM8 312 aa15.07■□□□□ 0
UPF3A-208ENST00000484246 CYP4X1Q8N118 509 aa15.07■□□□□ 0
UPF3A-208ENST00000484246 TEX9Q8N6V9 391 aa15.07■□□□□ 0
UPF3A-208ENST00000484246 STT3BQ8TCJ2 826 aa15.07■□□□□ 0
UPF3A-208ENST00000484246 APOBEC4Q8WW27 367 aaKnown RBP15.07■□□□□ 0
UPF3A-208ENST00000484246 COL26A1Q96A83 441 aa15.07■□□□□ 0
UPF3A-208ENST00000484246 MOCOSQ96EN8 888 aa15.07■□□□□ 0
UPF3A-208ENST00000484246 MMABQ96EY8 250 aaPredicted RBP15.07■□□□□ 0
UPF3A-208ENST00000484246 SMIM10Q96HG1 83 aa15.07■□□□□ 0
UPF3A-208ENST00000484246 ADNPQ9H2P0 1102 aa15.07■□□□□ 0
UPF3A-208ENST00000484246 ANKHQ9HCJ1 492 aa15.07■□□□□ 0
UPF3A-208ENST00000484246 TMEM216Q9P0N5 145 aa15.07■□□□□ 0
UPF3A-208ENST00000484246 DCDC2Q9UHG0 476 aa15.07■□□□□ 0
UPF3A-208ENST00000484246 PCTPQ9UKL6 214 aa15.07■□□□□ 0
UPF3A-208ENST00000484246 ZNF490Q9ULM2 529 aaPredicted RBP15.07■□□□□ 0
UPF3A-208ENST00000484246 KCNMB2Q9Y691 235 aa15.07■□□□□ 0
UPF3A-208ENST00000484246 A0A1W2PPM1 405 aa15.06■□□□□ 0
UPF3A-208ENST00000484246 A8MT66 165 aa15.06■□□□□ 0
UPF3A-208ENST00000484246 GALR3O60755 368 aaPredicted RBP15.06■□□□□ 0
UPF3A-208ENST00000484246 KLHL18O94889 574 aa15.06■□□□□ 0
UPF3A-208ENST00000484246 SIX3O95343 332 aaPredicted RBP15.06■□□□□ 0
UPF3A-208ENST00000484246 TBX6O95947 436 aaPredicted RBP15.06■□□□□ 0
UPF3A-208ENST00000484246 IGHEP01854 428 aa15.06■□□□□ 0
UPF3A-208ENST00000484246 STATHP02808 62 aa15.06■□□□□ 0
UPF3A-208ENST00000484246 ZGLP1P0C6A0 271 aa15.06■□□□□ 0
UPF3A-208ENST00000484246 SPTBP11277 2137 aa15.06■□□□□ 0
UPF3A-208ENST00000484246 IL10P22301 178 aa15.06■□□□□ 0
UPF3A-208ENST00000484246 MMP11P24347 488 aa15.06■□□□□ 0
UPF3A-208ENST00000484246 EEF1DP29692 281 aaKnown RBP15.06■□□□□ 0
UPF3A-208ENST00000484246 HNF4AP41235 474 aa15.06■□□□□ 0
UPF3A-208ENST00000484246 CCR10P46092 362 aa15.06■□□□□ 0
UPF3A-208ENST00000484246 STXBP1P61764 594 aaKnown RBP15.06■□□□□ 0
UPF3A-208ENST00000484246 OCA2Q04671 838 aa15.06■□□□□ 0
UPF3A-208ENST00000484246 GTF2H2Q13888 395 aa15.06■□□□□ 0
UPF3A-208ENST00000484246 RBBP5Q15291 538 aaKnown RBP15.06■□□□□ 0
UPF3A-208ENST00000484246 FAM69BQ5VUD6 431 aa15.06■□□□□ 0
UPF3A-208ENST00000484246 LIPJQ5W064 366 aa15.06■□□□□ 0
UPF3A-208ENST00000484246 GTF2H2CQ6P1K8 395 aa15.06■□□□□ 0
UPF3A-208ENST00000484246 MED25Q71SY5 747 aa15.06■□□□□ 0
UPF3A-208ENST00000484246 PRSS41Q7RTY9 318 aa15.06■□□□□ 0
UPF3A-208ENST00000484246 GOLGA7Q7Z5G4 137 aa15.06■□□□□ 0
UPF3A-208ENST00000484246 PPP1R32Q7Z5V6 425 aa15.06■□□□□ 0
UPF3A-208ENST00000484246 PDSS2Q86YH6 399 aa15.06■□□□□ 0
UPF3A-208ENST00000484246 ZC3H7AQ8IWR0 971 aaKnown RBP15.06■□□□□ 0
UPF3A-208ENST00000484246 L3MBTL4Q8NA19 623 aa15.06■□□□□ 0
UPF3A-208ENST00000484246 OR9A4Q8NGU2 314 aa15.06■□□□□ 0
UPF3A-208ENST00000484246 UTP15Q8TED0 518 aaKnown RBP15.06■□□□□ 0
UPF3A-208ENST00000484246 EXTL1Q92935 676 aa15.06■□□□□ 0
UPF3A-208ENST00000484246 GAL3ST3Q96A11 431 aa15.06■□□□□ 0
UPF3A-208ENST00000484246 MACROD1Q9BQ69 325 aa15.06■□□□□ 0
UPF3A-208ENST00000484246 AICDAQ9GZX7 198 aa15.06■□□□□ 0
UPF3A-208ENST00000484246 SEMA3GQ9NS98 782 aa15.06■□□□□ 0
UPF3A-208ENST00000484246 MAN2B2Q9Y2E5 1009 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms