RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 SLC22A11Q9NSA0 550 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 CUTCQ9NTM9 273 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 MBNL3Q9NUK0 354 aaKnown RBP5.61□□□□□ -1.51
CSDE1-207ENST00000483407 OLAHQ9NV23 265 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 RIC8BQ9NVN3 520 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 GPR160Q9UJ42 338 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 SLC39A10Q9ULF5 831 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 PLAGL1Q9UM63 463 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 SHANK1Q9Y566 2161 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 PCDHA3Q9Y5H8 950 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 PCDHA13Q9Y5I0 950 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 CSAG2Q9Y5P2 127 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 HS3ST3B1Q9Y662 390 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 PRSS21Q9Y6M0 314 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 FAM169AQ9Y6X4 670 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 DNHD1Q96M86 4753 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 MED13Q9UHV7 2174 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 ZFHX3Q15911 3703 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 FBN3Q75N90 2809 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 SETD2Q9BYW2 2564 aaPredicted RBP5.6□□□□□ -1.51
CSDE1-207ENST00000483407 DYTNA2CJ06 578 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 ACOT7O00154 380 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 SOCS6O14544 535 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 MAP2K7O14733 419 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 PAX4O43316 350 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 SRPX2O60687 465 aaPredicted RBP5.6□□□□□ -1.51
CSDE1-207ENST00000483407 ZG16O60844 167 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 ALOX12BO75342 701 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 JRKO75564 520 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 USP1O94782 785 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 IPO7O95373 1038 aaKnown RBP5.6□□□□□ -1.51
CSDE1-207ENST00000483407 HPP00738 406 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 APOA4P06727 396 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 UQCRHP07919 91 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 RNASE1P07998 156 aaKnown RBP5.6□□□□□ -1.51
CSDE1-207ENST00000483407 STSP08842 583 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 RAC2P15153 192 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 PTMSP20962 102 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 CD9P21926 228 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 FDXRP22570 491 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 PEBP1P30086 187 aaKnown RBP5.6□□□□□ -1.51
CSDE1-207ENST00000483407 FOXN2P32314 431 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 TRHRP34981 398 aaPredicted RBP5.6□□□□□ -1.51
CSDE1-207ENST00000483407 CYLC1P35663 651 aaPredicted RBP5.6□□□□□ -1.51
CSDE1-207ENST00000483407 CSE1LP55060 971 aaKnown RBP5.6□□□□□ -1.51
CSDE1-207ENST00000483407 RWDD2BP57060 319 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 ERVFRD-1P60508 538 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 ARG2P78540 354 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 HSPA14Q0VDF9 509 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 MFAP5Q13361 173 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 TMED2Q15363 201 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 KCTD11Q693B1 232 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 SP5Q6BEB4 398 aaPredicted RBP5.6□□□□□ -1.51
CSDE1-207ENST00000483407 RPUSD3Q6P087 351 aaKnown RBP5.6□□□□□ -1.51
CSDE1-207ENST00000483407 PRMT9Q6P2P2 845 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 FIGLAQ6QHK4 219 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 AFTPHQ6ULP2 937 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 NAPRTQ6XQN6 538 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 LINC00696Q6ZRV3 163 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 SHISA6Q6ZSJ9 500 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 COX15Q7KZN9 410 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 NLRP9Q7RTR0 991 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 MILR1Q7Z6M3 343 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 LINC00523Q86TU6 105 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 TAX1BP1Q86VP1 789 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 FJX1Q86VR8 437 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 KLHDC8BQ8IXV7 354 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 CCDC170Q8IYT3 715 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 SLC22A15Q8IZD6 547 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 DNAAF3Q8N9W5 541 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 CFAP61Q8NHU2 1237 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 ZUFSPQ96AP4 578 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 MIEF2Q96C03 454 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 PEX11GQ96HA9 241 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 THOC3Q96J01 351 aaKnown RBP5.6□□□□□ -1.51
CSDE1-207ENST00000483407 LMF1Q96S06 567 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 FAM118BQ9BPY3 351 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 SLX1AQ9BQ83 275 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 SELENOSQ9BQE4 189 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 CRB3Q9BUF7 120 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 MKS1Q9NXB0 559 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 COPG2Q9UBF2 871 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 CTSFQ9UBX1 484 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 KLHL20Q9Y2M5 609 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 MRFAP1Q9Y605 127 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 POLQO75417 2590 aa5.6□□□□□ -1.51
CSDE1-207ENST00000483407 NSG1A0A0A6YYJ2 146 aa5.59□□□□□ -1.51
CSDE1-207ENST00000483407 TRAV17A0A0B4J275 112 aa5.59□□□□□ -1.51
CSDE1-207ENST00000483407 HYKKA2RU49 373 aa5.59□□□□□ -1.51
CSDE1-207ENST00000483407 CCDC162PA2VCL2 907 aa5.59□□□□□ -1.51
CSDE1-207ENST00000483407 MROH6A6NGR9 719 aa5.59□□□□□ -1.51
CSDE1-207ENST00000483407 OR51F1A6NGY5 319 aa5.59□□□□□ -1.51
CSDE1-207ENST00000483407 VSTM2BA6NLU5 285 aa5.59□□□□□ -1.51
CSDE1-207ENST00000483407 ERI2A8K979 691 aaKnown RBP5.59□□□□□ -1.51
CSDE1-207ENST00000483407 TARM1B6A8C7 271 aa5.59□□□□□ -1.51
CSDE1-207ENST00000483407 RASGRF2O14827 1237 aa5.59□□□□□ -1.51
CSDE1-207ENST00000483407 PRPF4O43172 522 aaKnown RBP eCLIP5.59□□□□□ -1.51
CSDE1-207ENST00000483407 OR1I1O60431 355 aa5.59□□□□□ -1.51
CSDE1-207ENST00000483407 H2AFYO75367 372 aaKnown RBP5.59□□□□□ -1.51
CSDE1-207ENST00000483407 METTL18O95568 372 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms