RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 CRLS1Q9UJA2 301 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 TMPRSS11EQ9UL52 423 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 CLCA2Q9UQC9 943 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 ATP11BQ9Y2G3 1177 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 COA3Q9Y2R0 106 aaPredicted RBP7.48□□□□□ -1.21
SNX13-208ENST00000482558 AP4S1Q9Y587 144 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 ANAPC1Q9H1A4 1944 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 SCN5AQ14524 2016 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 NPEPPSL1A6NEC2 478 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 VGLL3A8MV65 326 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 WASH3PC4AMC7 463 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 E7ENX8 843 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 HRKO00198 91 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 LEFTY2O00292 366 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 CDC7O00311 574 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 E2F3O00716 465 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 FBP2O00757 339 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 UBE2CO00762 179 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 RGS14O43566 566 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 NIPSNAP2O75323 286 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 EEDO75530 441 aaKnown RBP7.47□□□□□ -1.21
SNX13-208ENST00000482558 GJB3O75712 270 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 AP2A2O94973 939 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 SIX3O95343 332 aaPredicted RBP7.47□□□□□ -1.21
SNX13-208ENST00000482558 PGM3O95394 542 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 CXCL14O95715 111 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 MT-ND5P03915 603 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 FUCA1P04066 466 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 GPIP06744 558 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 C8GP07360 202 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 LYNP07948 512 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 CELA3BP08861 270 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 OR56A5P0C7T3 313 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 EBLN1P0CF75 366 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 PRKCAP17252 672 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 TACR1P25103 407 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 SDHAP31040 664 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 HNMTP50135 292 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 CCR3P51677 355 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 PGGT1BP53609 377 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 EEFSECP57772 596 aaKnown RBP7.47□□□□□ -1.21
SNX13-208ENST00000482558 LMAN2Q12907 356 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 EPS8Q12929 822 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 SP140Q13342 867 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 KCNC3Q14003 757 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 RCAN2Q14206 197 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 FLYWCH1Q4VC44 716 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 CARD16Q5EG05 197 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 HABP4Q5JVS0 413 aaKnown RBP7.47□□□□□ -1.21
SNX13-208ENST00000482558 GPRC6AQ5T6X5 926 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 LINGO4Q6UY18 593 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 CYHR1Q6ZMK1 362 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 TPGS1Q6ZTW0 290 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 RNF44Q7L0R7 432 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 SZRD1Q7Z422 152 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 GGNQ86UU5 652 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 PROSER1Q86XN7 944 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 TMC8Q8IU68 726 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 CAMK1DQ8IU85 385 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 Q8N1Y9 231 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 DPP10Q8N608 796 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 SIDT2Q8NBJ9 832 aaKnown RBP7.47□□□□□ -1.21
SNX13-208ENST00000482558 OR2T34Q8NGX1 318 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 OR2T3Q8NH03 318 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 METTL6Q8TCB7 284 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 ECHDC3Q96DC8 303 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 SPDL1Q96EA4 605 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 GBP5Q96PP8 586 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 ZBTB18Q99592 522 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 COPS8Q99627 209 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 SH3GL1Q99961 368 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 NTMT1Q9BV86 223 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 OSBPL6Q9BZF3 934 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 CIPCQ9C0C6 399 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 C11orf49Q9H6J7 331 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 ERVMER34-1Q9H9K5 563 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 ZNF334Q9HCZ1 680 aaPredicted RBP7.47□□□□□ -1.21
SNX13-208ENST00000482558 IL23AQ9NPF7 189 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 IL26Q9NPH9 171 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 SEMA4BQ9NPR2 832 aaPredicted RBP7.47□□□□□ -1.21
SNX13-208ENST00000482558 HEBP1Q9NRV9 189 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 ASIC5Q9NY37 505 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 PKD2L2Q9NZM6 624 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 ACTR3BQ9P1U1 418 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 TRPS1Q9UHF7 1281 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 RIMS3Q9UJD0 308 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 MOSPD1Q9UJG1 213 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 PTBP2Q9UKA9 531 aaKnown RBP7.47□□□□□ -1.21
SNX13-208ENST00000482558 EIF3LQ9Y262 564 aaKnown RBP7.47□□□□□ -1.21
SNX13-208ENST00000482558 INSL6Q9Y581 213 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 ANGPTL3Q9Y5C1 460 aa7.47□□□□□ -1.21
SNX13-208ENST00000482558 C22orf46C9J442 243 aa7.46□□□□□ -1.22
SNX13-208ENST00000482558 NR5A2O00482 541 aa7.46□□□□□ -1.22
SNX13-208ENST00000482558 ZNF197O14709 1029 aa7.46□□□□□ -1.22
SNX13-208ENST00000482558 SGTAO43765 313 aa7.46□□□□□ -1.22
SNX13-208ENST00000482558 OR1I1O60431 355 aa7.46□□□□□ -1.22
SNX13-208ENST00000482558 GMNNO75496 209 aa7.46□□□□□ -1.22
SNX13-208ENST00000482558 ACTL6BO94805 426 aa7.46□□□□□ -1.22
SNX13-208ENST00000482558 SLC25A14O95258 325 aaPredicted RBP7.46□□□□□ -1.22
SNX13-208ENST00000482558 KRT6AP02538 564 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms