RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 C4orf47A7E2U8 309 aa16.78■□□□□ 0.28
UPF3A-206ENST00000480362 A8MU76 341 aa16.78■□□□□ 0.28
UPF3A-206ENST00000480362 H0YGG7 62 aa16.78■□□□□ 0.28
UPF3A-206ENST00000480362 MYO1DO94832 1006 aa16.78■□□□□ 0.28
UPF3A-206ENST00000480362 ZBTB11O95625 1053 aaPredicted RBP16.78■□□□□ 0.28
UPF3A-206ENST00000480362 CPNE6O95741 557 aa16.78■□□□□ 0.28
UPF3A-206ENST00000480362 G6PDP11413 515 aa16.78■□□□□ 0.28
UPF3A-206ENST00000480362 ARF3P61204 181 aaPredicted RBP16.78■□□□□ 0.28
UPF3A-206ENST00000480362 STX1BP61266 288 aa16.78■□□□□ 0.28
UPF3A-206ENST00000480362 HYAL2Q12891 473 aa16.78■□□□□ 0.28
UPF3A-206ENST00000480362 ZSCAN26Q16670 478 aa16.78■□□□□ 0.28
UPF3A-206ENST00000480362 SPIN4Q56A73 249 aa16.78■□□□□ 0.28
UPF3A-206ENST00000480362 ZC3H12BQ5HYM0 836 aaKnown RBP16.78■□□□□ 0.28
UPF3A-206ENST00000480362 TOR1AIP1Q5JTV8 583 aa16.78■□□□□ 0.28
UPF3A-206ENST00000480362 FAM91A1Q658Y4 838 aa16.78■□□□□ 0.28
UPF3A-206ENST00000480362 NOXRED1Q6NXP6 359 aa16.78■□□□□ 0.28
UPF3A-206ENST00000480362 TREML1Q86YW5 311 aa16.78■□□□□ 0.28
UPF3A-206ENST00000480362 NAXDQ8IW45 347 aa16.78■□□□□ 0.28
UPF3A-206ENST00000480362 PARP9Q8IXQ6 854 aa16.78■□□□□ 0.28
UPF3A-206ENST00000480362 METTL4Q8N3J2 472 aa16.78■□□□□ 0.28
UPF3A-206ENST00000480362 DNAJC22Q8N4W6 341 aa16.78■□□□□ 0.28
UPF3A-206ENST00000480362 WDR48Q8TAF3 677 aa16.78■□□□□ 0.28
UPF3A-206ENST00000480362 NT5CQ8TCD5 201 aa16.78■□□□□ 0.28
UPF3A-206ENST00000480362 FCRL1Q96LA6 429 aa16.78■□□□□ 0.28
UPF3A-206ENST00000480362 AICDAQ9GZX7 198 aa16.78■□□□□ 0.28
UPF3A-206ENST00000480362 KLHL31Q9H511 634 aa16.78■□□□□ 0.28
UPF3A-206ENST00000480362 SYNDIG1Q9H7V2 258 aa16.78■□□□□ 0.28
UPF3A-206ENST00000480362 ASIC5Q9NY37 505 aa16.78■□□□□ 0.28
UPF3A-206ENST00000480362 AHSPQ9NZD4 102 aa16.78■□□□□ 0.28
UPF3A-206ENST00000480362 SEMA5BQ9P283 1151 aa16.78■□□□□ 0.28
UPF3A-206ENST00000480362 DLGAP4Q9Y2H0 992 aa16.78■□□□□ 0.28
UPF3A-206ENST00000480362 MAP3K7O43318 606 aa16.77■□□□□ 0.28
UPF3A-206ENST00000480362 HCRTR1O43613 425 aa16.77■□□□□ 0.28
UPF3A-206ENST00000480362 UBOX5O94941 541 aa16.77■□□□□ 0.28
UPF3A-206ENST00000480362 SEMA3DO95025 777 aa16.77■□□□□ 0.28
UPF3A-206ENST00000480362 EIF2S1P05198 315 aaKnown RBP16.77■□□□□ 0.28
UPF3A-206ENST00000480362 PRPS2P11908 318 aa16.77■□□□□ 0.28
UPF3A-206ENST00000480362 BCKDHAP12694 445 aa16.77■□□□□ 0.28
UPF3A-206ENST00000480362 GPX3P22352 226 aa16.77■□□□□ 0.28
UPF3A-206ENST00000480362 ACP1P24666 158 aa16.77■□□□□ 0.28
UPF3A-206ENST00000480362 MAPK1P28482 360 aa16.77■□□□□ 0.28
UPF3A-206ENST00000480362 ADSLP30566 484 aaPredicted RBP16.77■□□□□ 0.28
UPF3A-206ENST00000480362 HNRNPH1P31943 449 aaKnown RBP16.77■□□□□ 0.28
UPF3A-206ENST00000480362 MLLT3P42568 568 aaPredicted RBP16.77■□□□□ 0.28
UPF3A-206ENST00000480362 SEPHS1P49903 392 aa16.77■□□□□ 0.28
UPF3A-206ENST00000480362 RAP1GDS1P52306 607 aa16.77■□□□□ 0.28
UPF3A-206ENST00000480362 NME5P56597 212 aa16.77■□□□□ 0.28
UPF3A-206ENST00000480362 RAE1P78406 368 aaKnown RBP16.77■□□□□ 0.28
UPF3A-206ENST00000480362 IRX1P78414 480 aaPredicted RBP16.77■□□□□ 0.28
UPF3A-206ENST00000480362 RGS1Q08116 209 aa16.77■□□□□ 0.28
UPF3A-206ENST00000480362 PWP1Q13610 501 aa16.77■□□□□ 0.28
UPF3A-206ENST00000480362 TMEM35AQ53FP2 167 aa16.77■□□□□ 0.28
UPF3A-206ENST00000480362 CYP20A1Q6UW02 462 aa16.77■□□□□ 0.28
UPF3A-206ENST00000480362 ZNF574Q6ZN55 896 aaPredicted RBP16.77■□□□□ 0.28
UPF3A-206ENST00000480362 TMPRSS9Q7Z410 1059 aa16.77■□□□□ 0.28
UPF3A-206ENST00000480362 PRSS42Q7Z5A4 293 aa16.77■□□□□ 0.28
UPF3A-206ENST00000480362 MCATQ8IVS2 390 aaKnown RBP16.77■□□□□ 0.28
UPF3A-206ENST00000480362 MIER2Q8N344 545 aa16.77■□□□□ 0.28
UPF3A-206ENST00000480362 LIX1Q8N485 282 aa16.77■□□□□ 0.28
UPF3A-206ENST00000480362 CAMKVQ8NCB2 501 aa16.77■□□□□ 0.28
UPF3A-206ENST00000480362 RERGQ96A58 199 aaPredicted RBP16.77■□□□□ 0.28
UPF3A-206ENST00000480362 RGMAQ96B86 450 aa16.77■□□□□ 0.28
UPF3A-206ENST00000480362 C11orf24Q96F05 449 aaPredicted RBP16.77■□□□□ 0.28
UPF3A-206ENST00000480362 CENPKQ9BS16 269 aa16.77■□□□□ 0.28
UPF3A-206ENST00000480362 BRINP2Q9C0B6 783 aa16.77■□□□□ 0.28
UPF3A-206ENST00000480362 REXO4Q9GZR2 422 aaKnown RBP16.77■□□□□ 0.28
UPF3A-206ENST00000480362 PDE7BQ9NP56 450 aa16.77■□□□□ 0.28
UPF3A-206ENST00000480362 SDR39U1Q9NRG7 319 aaPredicted RBP16.77■□□□□ 0.28
UPF3A-206ENST00000480362 MRGBPQ9NV56 204 aa16.77■□□□□ 0.28
UPF3A-206ENST00000480362 SOHLH2Q9NX45 425 aa16.77■□□□□ 0.28
UPF3A-206ENST00000480362 SIRT5Q9NXA8 310 aa16.77■□□□□ 0.28
UPF3A-206ENST00000480362 CAPN7Q9Y6W3 813 aa16.77■□□□□ 0.28
UPF3A-206ENST00000480362 GOLGA4Q13439 2230 aaKnown RBP16.76■□□□□ 0.27
UPF3A-206ENST00000480362 CAPN14A8MX76 684 aa16.76■□□□□ 0.27
UPF3A-206ENST00000480362 PSMD12O00232 456 aaPredicted RBP16.76■□□□□ 0.27
UPF3A-206ENST00000480362 PLPP1O14494 284 aa16.76■□□□□ 0.27
UPF3A-206ENST00000480362 SLC22A2O15244 555 aa16.76■□□□□ 0.27
UPF3A-206ENST00000480362 KLK1P06870 262 aa16.76■□□□□ 0.27
UPF3A-206ENST00000480362 ACPPP15309 386 aa16.76■□□□□ 0.27
UPF3A-206ENST00000480362 PIK3R1P27986 724 aa16.76■□□□□ 0.27
UPF3A-206ENST00000480362 TIA1P31483 386 aaKnown RBP eCLIP16.76■□□□□ 0.27
UPF3A-206ENST00000480362 BSGP35613 385 aa16.76■□□□□ 0.27
UPF3A-206ENST00000480362 MRPL19P49406 292 aaKnown RBP16.76■□□□□ 0.27
UPF3A-206ENST00000480362 ARL4DP49703 201 aa16.76■□□□□ 0.27
UPF3A-206ENST00000480362 VSX2P58304 361 aaPredicted RBP16.76■□□□□ 0.27
UPF3A-206ENST00000480362 DEFB110Q30KQ9 67 aa16.76■□□□□ 0.27
UPF3A-206ENST00000480362 ADPRMQ3LIE5 342 aa16.76■□□□□ 0.27
UPF3A-206ENST00000480362 PDCD4Q53EL6 469 aaKnown RBP16.76■□□□□ 0.27
UPF3A-206ENST00000480362 PAOXQ6QHF9 649 aa16.76■□□□□ 0.27
UPF3A-206ENST00000480362 COMMD6Q7Z4G1 85 aa16.76■□□□□ 0.27
UPF3A-206ENST00000480362 UBE3DQ7Z6J8 389 aa16.76■□□□□ 0.27
UPF3A-206ENST00000480362 KCT2Q8NC54 265 aa16.76■□□□□ 0.27
UPF3A-206ENST00000480362 OR4D9Q8NGE8 314 aa16.76■□□□□ 0.27
UPF3A-206ENST00000480362 KLHL6Q8WZ60 621 aa16.76■□□□□ 0.27
UPF3A-206ENST00000480362 MS4A6EQ96DS6 147 aa16.76■□□□□ 0.27
UPF3A-206ENST00000480362 DPYSL5Q9BPU6 564 aa16.76■□□□□ 0.27
UPF3A-206ENST00000480362 SORBS1Q9BX66 1292 aaKnown RBP16.76■□□□□ 0.27
UPF3A-206ENST00000480362 EBPLQ9BY08 206 aa16.76■□□□□ 0.27
UPF3A-206ENST00000480362 SLC6A16Q9GZN6 736 aa16.76■□□□□ 0.27
UPF3A-206ENST00000480362 CHRNA10Q9GZZ6 450 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms