RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 TMEM120AQ9BXJ8 343 aa6.14□□□□□ -1.43
HERC4-210ENST00000480158 ACPTQ9BZG2 426 aa6.14□□□□□ -1.43
HERC4-210ENST00000480158 TWSG1Q9GZX9 223 aa6.14□□□□□ -1.43
HERC4-210ENST00000480158 RAB33BQ9H082 229 aa6.14□□□□□ -1.43
HERC4-210ENST00000480158 KCNK13Q9HB14 408 aa6.14□□□□□ -1.43
HERC4-210ENST00000480158 ZFP69BQ9UJL9 534 aa6.14□□□□□ -1.43
HERC4-210ENST00000480158 PILRAQ9UKJ1 303 aa6.14□□□□□ -1.43
HERC4-210ENST00000480158 CDV3Q9UKY7 258 aaKnown RBP6.14□□□□□ -1.43
HERC4-210ENST00000480158 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.14□□□□□ -1.43
HERC4-210ENST00000480158 PCM1Q15154 2024 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 MN1Q10571 1320 aaPredicted RBP6.13□□□□□ -1.43
HERC4-210ENST00000480158 CELSR3Q9NYQ7 3312 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 FAM186AA6NE01 2351 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 PMS2P1A4D2B8 440 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 TMEM150CB9EJG8 249 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 E9PBE3 544 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 NTN3O00634 580 aaPredicted RBP6.13□□□□□ -1.43
HERC4-210ENST00000480158 NDUFAB1O14561 156 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 KLHL41O60662 606 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 SEC22BO75396 215 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 FTH1P19P0C7X4 201 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 THRAP10827 490 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 CCL4P13236 92 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 NELFEP18615 380 aaKnown RBP6.13□□□□□ -1.43
HERC4-210ENST00000480158 HRH2P25021 359 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 HNRNPH1P31943 449 aaKnown RBP6.13□□□□□ -1.43
HERC4-210ENST00000480158 MMP16P51512 607 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 PDX1P52945 283 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 ARFIP2P53365 341 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 NME5P56597 212 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 RPS15AP62244 130 aaKnown RBP6.13□□□□□ -1.43
HERC4-210ENST00000480158 C16orf72Q14CZ0 275 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 GGTA1PQ4G0N0 100 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 WASHC2DQ5SRD0 308 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 TMEM198Q66K66 360 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 RBM44Q6ZP01 1051 aaKnown RBP6.13□□□□□ -1.43
HERC4-210ENST00000480158 Q6ZSR9 355 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 SPATA21Q7Z572 469 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 LAS2Q8IYD9 372 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 TBC1D19Q8N5T2 526 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 METTL27Q8N6F8 245 aaPredicted RBP6.13□□□□□ -1.43
HERC4-210ENST00000480158 CDC26Q8NHZ8 85 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 NETO1Q8TDF5 533 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 ZNF473Q8WTR7 871 aaKnown RBP6.13□□□□□ -1.43
HERC4-210ENST00000480158 UBE2E3Q969T4 207 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 REPS1Q96D71 796 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 SLC45A3Q96JT2 553 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 OR6C1Q96RD1 312 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 CD180Q99467 661 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 C17orf62Q9BQA9 187 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 EBPLQ9BY08 206 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 SLC29A3Q9BZD2 475 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 SPRTNQ9H040 489 aaPredicted RBP6.13□□□□□ -1.43
HERC4-210ENST00000480158 NSRP1Q9H0G5 558 aaKnown RBP6.13□□□□□ -1.43
HERC4-210ENST00000480158 AKTIPQ9H8T0 292 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 DMRT3Q9NQL9 472 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 OCIAD1Q9NX40 245 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 HAO1Q9UJM8 370 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 SNRNP200O75643 2136 aaKnown RBP6.13□□□□□ -1.43
HERC4-210ENST00000480158 TRPC5OSA6NMA1 111 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 SDHDO14521 159 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 ERI3O43414 337 aaKnown RBP6.13□□□□□ -1.43
HERC4-210ENST00000480158 SNUPNO95149 360 aaKnown RBP6.13□□□□□ -1.43
HERC4-210ENST00000480158 TBX6O95947 436 aaPredicted RBP6.13□□□□□ -1.43
HERC4-210ENST00000480158 SLC35G6P0C7Q6 338 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 ITIH1P19827 911 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 NCF2P19878 526 aaPredicted RBP6.13□□□□□ -1.43
HERC4-210ENST00000480158 CSTF2P33240 577 aaKnown RBP eCLIP6.13□□□□□ -1.43
HERC4-210ENST00000480158 RAP1GDS1P52306 607 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 HK2P52789 917 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 INHBCP55103 352 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 RPL38P63173 70 aaKnown RBP6.13□□□□□ -1.43
HERC4-210ENST00000480158 TUBB3Q13509 450 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 RSPO4Q2I0M5 234 aaPredicted RBP6.13□□□□□ -1.43
HERC4-210ENST00000480158 AP5B1Q2VPB7 878 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 LSM12Q3MHD2 195 aaKnown RBP6.13□□□□□ -1.43
HERC4-210ENST00000480158 TUBB8Q3ZCM7 444 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 RFTN2Q52LD8 501 aaPredicted RBP6.13□□□□□ -1.43
HERC4-210ENST00000480158 TOR1AIP1Q5JTV8 583 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 HES3Q5TGS1 186 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 EPGNQ6UW88 154 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 ARHGAP22Q7Z5H3 698 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 ASPGQ86U10 573 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 ALYREFQ86V81 257 aaKnown RBP6.13□□□□□ -1.43
HERC4-210ENST00000480158 SLITRK4Q8IW52 837 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 SHISA5Q8N114 240 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 DNAJC22Q8N4W6 341 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 ZNF655Q8N720 491 aaPredicted RBP6.13□□□□□ -1.43
HERC4-210ENST00000480158 CSNK1A1LQ8N752 337 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 MFSD9Q8NBP5 474 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 CREB3L4Q8TEY5 395 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 USP7Q93009 1102 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 COL26A1Q96A83 441 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 APIPQ96GX9 242 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 FAR2Q96K12 515 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 REXO4Q9GZR2 422 aaKnown RBP6.13□□□□□ -1.43
HERC4-210ENST00000480158 ZNF768Q9H5H4 540 aaKnown RBP6.13□□□□□ -1.43
HERC4-210ENST00000480158 APMAPQ9HDC9 416 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 FGF21Q9NSA1 209 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 VPS29Q9UBQ0 182 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms