RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 AHSA2Q719I0 299 aa23.7■■□□□ 1.38
SYNGAP1-206ENST00000479510 PLD3Q8IV08 490 aa23.7■■□□□ 1.38
SYNGAP1-206ENST00000479510 HUS1BQ8NHY5 278 aa23.7■■□□□ 1.38
SYNGAP1-206ENST00000479510 WDR34Q96EX3 536 aa23.7■■□□□ 1.38
SYNGAP1-206ENST00000479510 MED8Q96G25 268 aa23.7■■□□□ 1.38
SYNGAP1-206ENST00000479510 DACH2Q96NX9 599 aa23.7■■□□□ 1.38
SYNGAP1-206ENST00000479510 CCM2Q9BSQ5 444 aa23.7■■□□□ 1.38
SYNGAP1-206ENST00000479510 COPS4Q9BT78 406 aa23.7■■□□□ 1.38
SYNGAP1-206ENST00000479510 FKBP14Q9NWM8 211 aa23.7■■□□□ 1.38
SYNGAP1-206ENST00000479510 TRNAU1APQ9NX07 287 aaKnown RBP23.7■■□□□ 1.38
SYNGAP1-206ENST00000479510 NDUFAF4Q9P032 175 aa23.7■■□□□ 1.38
SYNGAP1-206ENST00000479510 PAIP2BQ9ULR5 123 aaKnown RBP23.7■■□□□ 1.38
SYNGAP1-206ENST00000479510 A0A1W2PRU2 124 aa23.69■■□□□ 1.38
SYNGAP1-206ENST00000479510 TTC34A8MYJ7 566 aa23.69■■□□□ 1.38
SYNGAP1-206ENST00000479510 TNFRSF11BO00300 401 aa23.69■■□□□ 1.38
SYNGAP1-206ENST00000479510 TOR1BO14657 336 aa23.69■■□□□ 1.38
SYNGAP1-206ENST00000479510 ZNF197O14709 1029 aa23.69■■□□□ 1.38
SYNGAP1-206ENST00000479510 TGM5O43548 720 aa23.69■■□□□ 1.38
SYNGAP1-206ENST00000479510 ETHE1O95571 254 aa23.69■■□□□ 1.38
SYNGAP1-206ENST00000479510 IMPA1P29218 277 aa23.69■■□□□ 1.38
SYNGAP1-206ENST00000479510 RPS3AP61247 264 aaKnown RBP23.69■■□□□ 1.38
SYNGAP1-206ENST00000479510 NCS1P62166 190 aa23.69■■□□□ 1.38
SYNGAP1-206ENST00000479510 PAGE2BQ5JRK9 111 aa23.69■■□□□ 1.38
SYNGAP1-206ENST00000479510 SLCO4C1Q6ZQN7 724 aa23.69■■□□□ 1.38
SYNGAP1-206ENST00000479510 CCDC80Q76M96 950 aa23.69■■□□□ 1.38
SYNGAP1-206ENST00000479510 OR4A15Q8NGL6 344 aa23.69■■□□□ 1.38
SYNGAP1-206ENST00000479510 HCAR2Q8TDS4 363 aa23.69■■□□□ 1.38
SYNGAP1-206ENST00000479510 RIOK2Q9BVS4 552 aaKnown RBP23.69■■□□□ 1.38
SYNGAP1-206ENST00000479510 REEP4Q9H6H4 257 aa23.69■■□□□ 1.38
SYNGAP1-206ENST00000479510 THSD1Q9NS62 852 aa23.69■■□□□ 1.38
SYNGAP1-206ENST00000479510 POFUT2Q9Y2G5 429 aa23.69■■□□□ 1.38
SYNGAP1-206ENST00000479510 KRBA1A5PL33 1030 aa23.69■■□□□ 1.38
SYNGAP1-206ENST00000479510 OR2AG2A6NM03 316 aa23.69■■□□□ 1.38
SYNGAP1-206ENST00000479510 EFCAB9A8MZ26 197 aa23.69■■□□□ 1.38
SYNGAP1-206ENST00000479510 FOXE1O00358 373 aaPredicted RBP23.69■■□□□ 1.38
SYNGAP1-206ENST00000479510 TSPAN6O43657 245 aa23.69■■□□□ 1.38
SYNGAP1-206ENST00000479510 AOC2O75106 756 aa23.69■■□□□ 1.38
SYNGAP1-206ENST00000479510 ITGA2P17301 1181 aa23.69■■□□□ 1.38
SYNGAP1-206ENST00000479510 PPM1AP35813 382 aa23.69■■□□□ 1.38
SYNGAP1-206ENST00000479510 IFI44LQ53G44 452 aa23.69■■□□□ 1.38
SYNGAP1-206ENST00000479510 TUBA3EQ6PEY2 450 aa23.69■■□□□ 1.38
SYNGAP1-206ENST00000479510 NAGSQ8N159 534 aa23.69■■□□□ 1.38
SYNGAP1-206ENST00000479510 DEPDC4Q8N2C3 294 aa23.69■■□□□ 1.38
SYNGAP1-206ENST00000479510 DNASE1L2Q92874 299 aa23.69■■□□□ 1.38
SYNGAP1-206ENST00000479510 ZHX1-C8orf76Q96EF9 292 aa23.69■■□□□ 1.38
SYNGAP1-206ENST00000479510 PKP4Q99569 1192 aa23.69■■□□□ 1.38
SYNGAP1-206ENST00000479510 MYOCQ99972 504 aa23.69■■□□□ 1.38
SYNGAP1-206ENST00000479510 RHNO1Q9BSD3 238 aa23.69■■□□□ 1.38
SYNGAP1-206ENST00000479510 TMEM38AQ9H6F2 299 aa23.69■■□□□ 1.38
SYNGAP1-206ENST00000479510 FADS2P1A8MWK0 482 aa23.68■■□□□ 1.38
SYNGAP1-206ENST00000479510 NPC1O15118 1278 aa23.68■■□□□ 1.38
SYNGAP1-206ENST00000479510 PCDH7O60245 1069 aa23.68■■□□□ 1.38
SYNGAP1-206ENST00000479510 TNFRSF21O75509 655 aa23.68■■□□□ 1.38
SYNGAP1-206ENST00000479510 GCM2O75603 506 aaPredicted RBP23.68■■□□□ 1.38
SYNGAP1-206ENST00000479510 CD40LGP29965 261 aa23.68■■□□□ 1.38
SYNGAP1-206ENST00000479510 ETV3P41162 512 aa23.68■■□□□ 1.38
SYNGAP1-206ENST00000479510 PRMT2P55345 433 aa23.68■■□□□ 1.38
SYNGAP1-206ENST00000479510 LSM3P62310 102 aaKnown RBP23.68■■□□□ 1.38
SYNGAP1-206ENST00000479510 PPIGQ13427 754 aaKnown RBP eCLIP23.68■■□□□ 1.386e-14■■■■■ 29.1
SYNGAP1-206ENST00000479510 FBXO43Q4G163 708 aa23.68■■□□□ 1.38
SYNGAP1-206ENST00000479510 DDX59Q5T1V6 619 aaKnown RBP eCLIP23.68■■□□□ 1.38
SYNGAP1-206ENST00000479510 TSEN54Q7Z6J9 526 aaKnown RBP23.68■■□□□ 1.38
SYNGAP1-206ENST00000479510 TRIM74Q86UV6 250 aa23.68■■□□□ 1.38
SYNGAP1-206ENST00000479510 TRIM73Q86UV7 250 aa23.68■■□□□ 1.38
SYNGAP1-206ENST00000479510 TMEM25Q86YD3 366 aa23.68■■□□□ 1.38
SYNGAP1-206ENST00000479510 OR52N2Q8NGI0 321 aa23.68■■□□□ 1.38
SYNGAP1-206ENST00000479510 OR4C15Q8NGM1 316 aa23.68■■□□□ 1.38
SYNGAP1-206ENST00000479510 RHOXF1Q8NHV9 184 aa23.68■■□□□ 1.38
SYNGAP1-206ENST00000479510 PUM2Q8TB72 1066 aaKnown RBP eCLIP23.68■■□□□ 1.38
SYNGAP1-206ENST00000479510 MMP27Q9H306 513 aa23.68■■□□□ 1.38
SYNGAP1-206ENST00000479510 EPHX3Q9H6B9 360 aa23.68■■□□□ 1.38
SYNGAP1-206ENST00000479510 GNG14A0A1W2PPG7 69 aa23.68■■□□□ 1.38
SYNGAP1-206ENST00000479510 RFPL2O75678 378 aa23.68■■□□□ 1.38
SYNGAP1-206ENST00000479510 SLC16A8O95907 504 aa23.68■■□□□ 1.38
SYNGAP1-206ENST00000479510 TIMP2P16035 220 aa23.68■■□□□ 1.38
SYNGAP1-206ENST00000479510 TGM1P22735 817 aa23.68■■□□□ 1.38
SYNGAP1-206ENST00000479510 MVDP53602 400 aa23.68■■□□□ 1.38
SYNGAP1-206ENST00000479510 ZNF763Q0D2J5 394 aa23.68■■□□□ 1.38
SYNGAP1-206ENST00000479510 GCNT6Q5T4J0 391 aa23.68■■□□□ 1.38
SYNGAP1-206ENST00000479510 DPPA4Q7L190 304 aa23.68■■□□□ 1.38
SYNGAP1-206ENST00000479510 TECPR1Q7Z6L1 1165 aa23.68■■□□□ 1.38
SYNGAP1-206ENST00000479510 LACC1Q8IV20 430 aa23.68■■□□□ 1.38
SYNGAP1-206ENST00000479510 DNAJC22Q8N4W6 341 aa23.68■■□□□ 1.38
SYNGAP1-206ENST00000479510 RASGEF1AQ8N9B8 481 aa23.68■■□□□ 1.38
SYNGAP1-206ENST00000479510 DENND6BQ8NEG7 585 aa23.68■■□□□ 1.38
SYNGAP1-206ENST00000479510 GLYATL1Q969I3 302 aa23.68■■□□□ 1.38
SYNGAP1-206ENST00000479510 FEVQ99581 238 aa23.68■■□□□ 1.38
SYNGAP1-206ENST00000479510 RAD9AQ99638 391 aa23.68■■□□□ 1.38
SYNGAP1-206ENST00000479510 GPBP1L1Q9HC44 474 aaPredicted RBP23.68■■□□□ 1.38
SYNGAP1-206ENST00000479510 DKK3Q9UBP4 350 aa23.68■■□□□ 1.38
SYNGAP1-206ENST00000479510 ENOPH1Q9UHY7 261 aa23.68■■□□□ 1.38
SYNGAP1-206ENST00000479510 TMEM202A6NGA9 273 aa23.67■■□□□ 1.38
SYNGAP1-206ENST00000479510 CLCA1A8K7I4 914 aa23.67■■□□□ 1.38
SYNGAP1-206ENST00000479510 IFNA14P01570 189 aa23.67■■□□□ 1.38
SYNGAP1-206ENST00000479510 LCKP06239 509 aa23.67■■□□□ 1.38
SYNGAP1-206ENST00000479510 PPP5CP53041 499 aa23.67■■□□□ 1.38
SYNGAP1-206ENST00000479510 ADIPOR2Q86V24 386 aa23.67■■□□□ 1.38
SYNGAP1-206ENST00000479510 OXR1Q8N573 874 aa23.67■■□□□ 1.38
SYNGAP1-206ENST00000479510 OR10G2Q8NGC3 310 aa23.67■■□□□ 1.38
SYNGAP1-206ENST00000479510 LRIG1Q96JA1 1093 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms