RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 DLL4Q9NR61 685 aa15.08■□□□□ 0
DDX56-210ENST00000479440 PLSCR2Q9NRY7 297 aa15.08■□□□□ 0
DDX56-210ENST00000479440 TREX1Q9NSU2 369 aa15.08■□□□□ 0
DDX56-210ENST00000479440 TMEM184CQ9NVA4 438 aa15.08■□□□□ 0
DDX56-210ENST00000479440 HCFC1P51610 2035 aa15.08■□□□□ 0
DDX56-210ENST00000479440 ZNF469Q96JG9 3925 aaPredicted RBP15.07■□□□□ 0
DDX56-210ENST00000479440 SAGE2PA6NJ88 616 aa15.07■□□□□ 0
DDX56-210ENST00000479440 PEX1O43933 1283 aa15.07■□□□□ 0
DDX56-210ENST00000479440 IFNB1P01574 187 aa15.07■□□□□ 0
DDX56-210ENST00000479440 APRTP07741 180 aa15.07■□□□□ 0
DDX56-210ENST00000479440 RFC3P40938 356 aa15.07■□□□□ 0
DDX56-210ENST00000479440 ADARP55265 1226 aaKnown RBP15.07■□□□□ 0
DDX56-210ENST00000479440 NUP107P57740 925 aa15.07■□□□□ 0
DDX56-210ENST00000479440 SKP1P63208 163 aa15.07■□□□□ 0
DDX56-210ENST00000479440 PMPCAQ10713 525 aa15.07■□□□□ 0
DDX56-210ENST00000479440 TYSND1Q2T9J0 566 aa15.07■□□□□ 0
DDX56-210ENST00000479440 ASPGQ86U10 573 aa15.07■□□□□ 0
DDX56-210ENST00000479440 ZNF227Q86WZ6 799 aa15.07■□□□□ 0
DDX56-210ENST00000479440 SHISA5Q8N114 240 aa15.07■□□□□ 0
DDX56-210ENST00000479440 CYP4Z2PQ8N1L4 340 aa15.07■□□□□ 0
DDX56-210ENST00000479440 RPRMLQ8N4K4 120 aa15.07■□□□□ 0
DDX56-210ENST00000479440 UBL4BQ8N7F7 174 aa15.07■□□□□ 0
DDX56-210ENST00000479440 ZFP62Q8NB50 900 aaPredicted RBP15.07■□□□□ 0
DDX56-210ENST00000479440 CCDC177Q9NQR7 707 aaPredicted RBP15.07■□□□□ 0
DDX56-210ENST00000479440 RAB6BQ9NRW1 208 aa15.07■□□□□ 0
DDX56-210ENST00000479440 LANCL2Q9NS86 450 aa15.07■□□□□ 0
DDX56-210ENST00000479440 NAALAD2Q9Y3Q0 740 aa15.07■□□□□ 0
DDX56-210ENST00000479440 L3MBTL1Q9Y468 752 aa15.07■□□□□ 0
DDX56-210ENST00000479440 HRH3Q9Y5N1 445 aa15.07■□□□□ 0
DDX56-210ENST00000479440 ACOT7O00154 380 aa15.06■□□□□ 0
DDX56-210ENST00000479440 CTAG2O75638 210 aa15.06■□□□□ 0
DDX56-210ENST00000479440 FHP07954 510 aa15.06■□□□□ 0
DDX56-210ENST00000479440 KCNJ11Q14654 390 aa15.06■□□□□ 0
DDX56-210ENST00000479440 HERC3Q15034 1050 aa15.06■□□□□ 0
DDX56-210ENST00000479440 TAOK1Q7L7X3 1001 aa15.06■□□□□ 0
DDX56-210ENST00000479440 PDSS2Q86YH6 399 aa15.06■□□□□ 0
DDX56-210ENST00000479440 IL22Q9GZX6 179 aa15.06■□□□□ 0
DDX56-210ENST00000479440 CLEC4MQ9H2X3 399 aaPredicted RBP15.06■□□□□ 0
DDX56-210ENST00000479440 RPH3AQ9Y2J0 694 aaPredicted RBP15.06■□□□□ 0
DDX56-210ENST00000479440 SLC22A7Q9Y694 548 aa15.06■□□□□ 0
DDX56-210ENST00000479440 ZNF860A6NHJ4 632 aa15.05■□□□□ -0
DDX56-210ENST00000479440 FIGNL2A6NMB9 653 aa15.05■□□□□ -0
DDX56-210ENST00000479440 AP3B1O00203 1094 aa15.05■□□□□ -0
DDX56-210ENST00000479440 IPO7O95373 1038 aaKnown RBP15.05■□□□□ -0
DDX56-210ENST00000479440 IMPA1P29218 277 aa15.05■□□□□ -0
DDX56-210ENST00000479440 GRK3P35626 688 aa15.05■□□□□ -0
DDX56-210ENST00000479440 PEX19P40855 299 aa15.05■□□□□ -0
DDX56-210ENST00000479440 SESN2P58004 480 aaPredicted RBP15.05■□□□□ -0
DDX56-210ENST00000479440 TBPL1P62380 186 aa15.05■□□□□ -0
DDX56-210ENST00000479440 MEF2AQ02078 507 aaPredicted RBP15.05■□□□□ -0
DDX56-210ENST00000479440 NIPAL1Q6NVV3 410 aa15.05■□□□□ -0
DDX56-210ENST00000479440 BIVMQ86UB2 503 aa15.05■□□□□ -0
DDX56-210ENST00000479440 REXO1L1PQ8IX06 675 aa15.05■□□□□ -0
DDX56-210ENST00000479440 CYP4X1Q8N118 509 aa15.05■□□□□ -0
DDX56-210ENST00000479440 KCT2Q8NC54 265 aa15.05■□□□□ -0
DDX56-210ENST00000479440 OR10Q1Q8NGQ4 319 aa15.05■□□□□ -0
DDX56-210ENST00000479440 CREB3L4Q8TEY5 395 aa15.05■□□□□ -0
DDX56-210ENST00000479440 TBC1D20Q96BZ9 403 aa15.05■□□□□ -0
DDX56-210ENST00000479440 TCF12Q99081 682 aa15.05■□□□□ -0
DDX56-210ENST00000479440 MACROD1Q9BQ69 325 aa15.05■□□□□ -0
DDX56-210ENST00000479440 GPATCH1Q9BRR8 931 aaKnown RBP15.05■□□□□ -0
DDX56-210ENST00000479440 DEFB126Q9BYW3 111 aa15.05■□□□□ -0
DDX56-210ENST00000479440 ZNF358Q9NW07 568 aa15.05■□□□□ -0
DDX56-210ENST00000479440 AMFRQ9UKV5 643 aa15.05■□□□□ -0
DDX56-210ENST00000479440 BTNL10A8MVZ5 291 aa15.04■□□□□ -0
DDX56-210ENST00000479440 MIF4GDA9UHW6 222 aaKnown RBP15.04■□□□□ -0
DDX56-210ENST00000479440 PDE9AO76083 593 aa15.04■□□□□ -0
DDX56-210ENST00000479440 OGNP20774 298 aaKnown RBP15.04■□□□□ -0
DDX56-210ENST00000479440 NMBRP28336 390 aa15.04■□□□□ -0
DDX56-210ENST00000479440 DGKQP52824 942 aa15.04■□□□□ -0
DDX56-210ENST00000479440 GPR85P60893 370 aa15.04■□□□□ -0
DDX56-210ENST00000479440 LTBQ06643 244 aa15.04■□□□□ -0
DDX56-210ENST00000479440 RPS6KA1Q15418 735 aa15.04■□□□□ -0
DDX56-210ENST00000479440 QSOX2Q6ZRP7 698 aa15.04■□□□□ -0
DDX56-210ENST00000479440 CAMKMTQ7Z624 323 aa15.04■□□□□ -0
DDX56-210ENST00000479440 LRRC56Q8IYG6 542 aaPredicted RBP15.04■□□□□ -0
DDX56-210ENST00000479440 ZZZ3Q8IYH5 903 aa15.04■□□□□ -0
DDX56-210ENST00000479440 ARMC10Q8N2F6 343 aa15.04■□□□□ -0
DDX56-210ENST00000479440 TMEM156Q8N614 296 aa15.04■□□□□ -0
DDX56-210ENST00000479440 LRRC57Q8N9N7 239 aa15.04■□□□□ -0
DDX56-210ENST00000479440 OR5T3Q8NGG3 340 aa15.04■□□□□ -0
DDX56-210ENST00000479440 OR52N2Q8NGI0 321 aa15.04■□□□□ -0
DDX56-210ENST00000479440 SLC13A3Q8WWT9 602 aa15.04■□□□□ -0
DDX56-210ENST00000479440 ATG4AQ8WYN0 398 aa15.04■□□□□ -0
DDX56-210ENST00000479440 TM4SF19Q96DZ7 209 aa15.04■□□□□ -0
DDX56-210ENST00000479440 FRMD8P1Q9BZ68 369 aaPredicted RBP15.04■□□□□ -0
DDX56-210ENST00000479440 PCBD2Q9H0N5 130 aa15.04■□□□□ -0
DDX56-210ENST00000479440 TIMMDC1Q9NPL8 285 aa15.04■□□□□ -0
DDX56-210ENST00000479440 EIF2B3Q9NR50 452 aaKnown RBP15.04■□□□□ -0
DDX56-210ENST00000479440 PAK5Q9P286 719 aa15.04■□□□□ -0
DDX56-210ENST00000479440 VPS9D1Q9Y2B5 631 aa15.04■□□□□ -0
DDX56-210ENST00000479440 PLEKHA6Q9Y2H5 1048 aa15.04■□□□□ -0
DDX56-210ENST00000479440 CRYL1Q9Y2S2 319 aa15.04■□□□□ -0
DDX56-210ENST00000479440 DUSP10Q9Y6W6 482 aa15.04■□□□□ -0
DDX56-210ENST00000479440 ANKHD1Q8IWZ3 2542 aaKnown RBP15.04■□□□□ -0
DDX56-210ENST00000479440 NAV3Q8IVL0 2385 aa15.04■□□□□ -0
DDX56-210ENST00000479440 GTF3C1Q12789 2109 aa15.04■□□□□ -0
DDX56-210ENST00000479440 FEZF1A0PJY2 475 aa15.03■□□□□ -0
DDX56-210ENST00000479440 GRID2IPA4D2P6 1211 aa15.03■□□□□ -0
DDX56-210ENST00000479440 BCKDKO14874 412 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms