RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 SH2D5Q6ZV89 423 aa14.69□□□□□ -0.06
C9orf3-217ENST00000479161 AMER3Q8N944 861 aa14.69□□□□□ -0.06
C9orf3-217ENST00000479161 ANKRD53Q8N9V6 530 aa14.69□□□□□ -0.06
C9orf3-217ENST00000479161 ZNF740Q8NDX6 193 aa14.69□□□□□ -0.06
C9orf3-217ENST00000479161 CREB3L4Q8TEY5 395 aa14.69□□□□□ -0.06
C9orf3-217ENST00000479161 COL26A1Q96A83 441 aa14.69□□□□□ -0.06
C9orf3-217ENST00000479161 RNF31Q96EP0 1072 aa14.69□□□□□ -0.06
C9orf3-217ENST00000479161 SMIM10Q96HG1 83 aa14.69□□□□□ -0.06
C9orf3-217ENST00000479161 ROPN1BQ9BZX4 212 aaPredicted RBP14.69□□□□□ -0.06
C9orf3-217ENST00000479161 ROPN1Q9HAT0 212 aaPredicted RBP14.69□□□□□ -0.06
C9orf3-217ENST00000479161 DCDC2Q9UHG0 476 aa14.69□□□□□ -0.06
C9orf3-217ENST00000479161 PTRH2Q9Y3E5 179 aaKnown RBP14.69□□□□□ -0.06
C9orf3-217ENST00000479161 CDC14CA4D256 554 aa14.68□□□□□ -0.06
C9orf3-217ENST00000479161 NDUFS4O43181 175 aa14.68□□□□□ -0.06
C9orf3-217ENST00000479161 CCNT2O60583 730 aaKnown RBP14.68□□□□□ -0.06
C9orf3-217ENST00000479161 PRAMEF4O60810 478 aa14.68□□□□□ -0.06
C9orf3-217ENST00000479161 UMODP07911 640 aa14.68□□□□□ -0.06
C9orf3-217ENST00000479161 ZGLP1P0C6A0 271 aa14.68□□□□□ -0.06
C9orf3-217ENST00000479161 PRKAR1AP10644 381 aa14.68□□□□□ -0.06
C9orf3-217ENST00000479161 HNF4AP41235 474 aa14.68□□□□□ -0.06
C9orf3-217ENST00000479161 RRADP55042 308 aa14.68□□□□□ -0.06
C9orf3-217ENST00000479161 SOX8P57073 446 aa14.68□□□□□ -0.06
C9orf3-217ENST00000479161 STXBP1P61764 594 aaKnown RBP14.68□□□□□ -0.06
C9orf3-217ENST00000479161 IRF8Q02556 426 aa14.68□□□□□ -0.06
C9orf3-217ENST00000479161 HYAL2Q12891 473 aa14.68□□□□□ -0.06
C9orf3-217ENST00000479161 DOC2AQ14183 400 aa14.68□□□□□ -0.06
C9orf3-217ENST00000479161 HIST2H2ACQ16777 129 aaPredicted RBP14.68□□□□□ -0.06
C9orf3-217ENST00000479161 ERCC6LQ2NKX8 1250 aa14.68□□□□□ -0.06
C9orf3-217ENST00000479161 ADPRMQ3LIE5 342 aa14.68□□□□□ -0.06
C9orf3-217ENST00000479161 SOWAHCQ53LP3 525 aaPredicted RBP14.68□□□□□ -0.06
C9orf3-217ENST00000479161 C10orf62Q5T681 223 aaPredicted RBP14.68□□□□□ -0.06
C9orf3-217ENST00000479161 PRAMEF9Q5VWM5 478 aa14.68□□□□□ -0.06
C9orf3-217ENST00000479161 HIST2H2AA3Q6FI13 130 aa14.68□□□□□ -0.06
C9orf3-217ENST00000479161 ABHD13Q7L211 337 aa14.68□□□□□ -0.06
C9orf3-217ENST00000479161 LAS2Q8IYD9 372 aa14.68□□□□□ -0.06
C9orf3-217ENST00000479161 KCT2Q8NC54 265 aa14.68□□□□□ -0.06
C9orf3-217ENST00000479161 STT3BQ8TCJ2 826 aa14.68□□□□□ -0.06
C9orf3-217ENST00000479161 EXTL1Q92935 676 aa14.68□□□□□ -0.06
C9orf3-217ENST00000479161 MMABQ96EY8 250 aaPredicted RBP14.68□□□□□ -0.06
C9orf3-217ENST00000479161 TMEM109Q9BVC6 243 aa14.68□□□□□ -0.06
C9orf3-217ENST00000479161 PARD6BQ9BYG5 372 aa14.68□□□□□ -0.06
C9orf3-217ENST00000479161 SPNS1Q9H2V7 528 aa14.68□□□□□ -0.06
C9orf3-217ENST00000479161 ANKHQ9HCJ1 492 aa14.68□□□□□ -0.06
C9orf3-217ENST00000479161 ZNF358Q9NW07 568 aa14.68□□□□□ -0.06
C9orf3-217ENST00000479161 PSD3Q9NYI0 1048 aa14.68□□□□□ -0.06
C9orf3-217ENST00000479161 XPR1Q9UBH6 696 aa14.68□□□□□ -0.06
C9orf3-217ENST00000479161 MAN2B2Q9Y2E5 1009 aa14.68□□□□□ -0.06
C9orf3-217ENST00000479161 ANKDD1BA6NHY2 528 aa14.67□□□□□ -0.06
C9orf3-217ENST00000479161 E2F3O00716 465 aa14.67□□□□□ -0.06
C9orf3-217ENST00000479161 SMIM24O75264 130 aa14.67□□□□□ -0.06
C9orf3-217ENST00000479161 SHBGP04278 402 aa14.67□□□□□ -0.06
C9orf3-217ENST00000479161 ALOX12P18054 663 aa14.67□□□□□ -0.06
C9orf3-217ENST00000479161 VARSP26640 1264 aaKnown RBP14.67□□□□□ -0.06
C9orf3-217ENST00000479161 AGTR2P50052 363 aa14.67□□□□□ -0.06
C9orf3-217ENST00000479161 ARFIP1P53367 373 aa14.67□□□□□ -0.06
C9orf3-217ENST00000479161 NAA20P61599 178 aa14.67□□□□□ -0.06
C9orf3-217ENST00000479161 MEF2AQ02078 507 aaPredicted RBP14.67□□□□□ -0.06
C9orf3-217ENST00000479161 CHIT1Q13231 466 aa14.67□□□□□ -0.06
C9orf3-217ENST00000479161 SLBPQ14493 270 aaKnown RBP eCLIP14.67□□□□□ -0.06
C9orf3-217ENST00000479161 RBBP5Q15291 538 aaKnown RBP14.67□□□□□ -0.06
C9orf3-217ENST00000479161 DEFB109BQ30KR1 87 aa14.67□□□□□ -0.06
C9orf3-217ENST00000479161 XKR6Q5GH73 641 aa14.67□□□□□ -0.06
C9orf3-217ENST00000479161 SNX31Q8N9S9 440 aa14.67□□□□□ -0.06
C9orf3-217ENST00000479161 L3MBTL4Q8NA19 623 aa14.67□□□□□ -0.06
C9orf3-217ENST00000479161 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.67□□□□□ -0.06
C9orf3-217ENST00000479161 EXT2Q93063 718 aa14.67□□□□□ -0.06
C9orf3-217ENST00000479161 ESAMQ96AP7 390 aa14.67□□□□□ -0.06
C9orf3-217ENST00000479161 MIEF2Q96C03 454 aa14.67□□□□□ -0.06
C9orf3-217ENST00000479161 MAGEB10Q96LZ2 347 aaPredicted RBP14.67□□□□□ -0.06
C9orf3-217ENST00000479161 FER1L6-AS2Q96M78 137 aa14.67□□□□□ -0.06
C9orf3-217ENST00000479161 OR1F2PQ96R84 312 aa14.67□□□□□ -0.06
C9orf3-217ENST00000479161 ARHGAP9Q9BRR9 750 aa14.67□□□□□ -0.06
C9orf3-217ENST00000479161 NTMT1Q9BV86 223 aa14.67□□□□□ -0.06
C9orf3-217ENST00000479161 CTSFQ9UBX1 484 aa14.67□□□□□ -0.06
C9orf3-217ENST00000479161 ZNF490Q9ULM2 529 aaPredicted RBP14.67□□□□□ -0.06
C9orf3-217ENST00000479161 PPT2Q9UMR5 302 aa14.67□□□□□ -0.06
C9orf3-217ENST00000479161 ASB1Q9Y576 335 aa14.67□□□□□ -0.06
C9orf3-217ENST00000479161 DOCK10Q96BY6 2186 aa14.66□□□□□ -0.06
C9orf3-217ENST00000479161 A0A0A6YYC8 382 aaPredicted RBP14.66□□□□□ -0.06
C9orf3-217ENST00000479161 LRIT2A6NDA9 550 aa14.66□□□□□ -0.06
C9orf3-217ENST00000479161 H0YIV9 168 aa14.66□□□□□ -0.06
C9orf3-217ENST00000479161 I3L1I5 382 aaPredicted RBP14.66□□□□□ -0.06
C9orf3-217ENST00000479161 AGPSO00116 658 aa14.66□□□□□ -0.06
C9orf3-217ENST00000479161 KLHL41O60662 606 aa14.66□□□□□ -0.06
C9orf3-217ENST00000479161 GALR3O60755 368 aaPredicted RBP14.66□□□□□ -0.06
C9orf3-217ENST00000479161 CEACAM4O75871 244 aa14.66□□□□□ -0.06
C9orf3-217ENST00000479161 SBK3P0C264 359 aa14.66□□□□□ -0.06
C9orf3-217ENST00000479161 CD22P20273 847 aa14.66□□□□□ -0.06
C9orf3-217ENST00000479161 PIK3CBP42338 1070 aa14.66□□□□□ -0.06
C9orf3-217ENST00000479161 CCT5P48643 541 aa14.66□□□□□ -0.06
C9orf3-217ENST00000479161 POLE2P56282 527 aa14.66□□□□□ -0.06
C9orf3-217ENST00000479161 COL9A2Q14055 689 aaPredicted RBP14.66□□□□□ -0.06
C9orf3-217ENST00000479161 GRHL2Q6ISB3 625 aa14.66□□□□□ -0.06
C9orf3-217ENST00000479161 MRGPREQ86SM8 312 aa14.66□□□□□ -0.06
C9orf3-217ENST00000479161 SRFBP1Q8NEF9 429 aaKnown RBP14.66□□□□□ -0.06
C9orf3-217ENST00000479161 OR9A4Q8NGU2 314 aa14.66□□□□□ -0.06
C9orf3-217ENST00000479161 UTP15Q8TED0 518 aaKnown RBP14.66□□□□□ -0.06
C9orf3-217ENST00000479161 SLC39A7Q92504 469 aa14.66□□□□□ -0.06
C9orf3-217ENST00000479161 GAL3ST3Q96A11 431 aa14.66□□□□□ -0.06
C9orf3-217ENST00000479161 SCYL1Q96KG9 808 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms