RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 GSX2Q9BZM3 304 aa20.5■□□□□ 0.87
SDF4-206ENST00000478938 KCTD3Q9Y597 815 aa20.5■□□□□ 0.87
SDF4-206ENST00000478938 NPEPPSL1A6NEC2 478 aa20.5■□□□□ 0.87
SDF4-206ENST00000478938 LGALS8O00214 317 aa20.5■□□□□ 0.87
SDF4-206ENST00000478938 QSOX1O00391 747 aa20.5■□□□□ 0.87
SDF4-206ENST00000478938 FGF18O76093 207 aa20.5■□□□□ 0.87
SDF4-206ENST00000478938 SLC2A4P14672 509 aa20.5■□□□□ 0.87
SDF4-206ENST00000478938 GEMP55040 296 aa20.5■□□□□ 0.87
SDF4-206ENST00000478938 CYP4F8P98187 520 aa20.5■□□□□ 0.87
SDF4-206ENST00000478938 RPL6Q02878 288 aaKnown RBP20.5■□□□□ 0.87
SDF4-206ENST00000478938 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.5■□□□□ 0.87
SDF4-206ENST00000478938 PUDPQ08623 228 aa20.5■□□□□ 0.87
SDF4-206ENST00000478938 CSTF3Q12996 717 aaKnown RBP20.5■□□□□ 0.87
SDF4-206ENST00000478938 SLC14A1Q13336 389 aa20.5■□□□□ 0.87
SDF4-206ENST00000478938 FAM160B1Q5W0V3 765 aa20.5■□□□□ 0.87
SDF4-206ENST00000478938 XRRA1Q6P2D8 792 aa20.5■□□□□ 0.87
SDF4-206ENST00000478938 RANBP10Q6VN20 620 aa20.5■□□□□ 0.87
SDF4-206ENST00000478938 C17orf107Q6ZR85 190 aa20.5■□□□□ 0.87
SDF4-206ENST00000478938 ZZZ3Q8IYH5 903 aa20.5■□□□□ 0.87
SDF4-206ENST00000478938 VPS37AQ8NEZ2 397 aa20.5■□□□□ 0.87
SDF4-206ENST00000478938 NT5C3BQ969T7 300 aa20.5■□□□□ 0.87
SDF4-206ENST00000478938 CIDECQ96AQ7 238 aaPredicted RBP20.5■□□□□ 0.87
SDF4-206ENST00000478938 CDCA4Q9BXL8 241 aa20.5■□□□□ 0.87
SDF4-206ENST00000478938 RBCK1Q9BYM8 510 aa20.5■□□□□ 0.87
SDF4-206ENST00000478938 CATSPERZQ9NTU4 200 aa20.5■□□□□ 0.87
SDF4-206ENST00000478938 DUSP12Q9UNI6 340 aa20.5■□□□□ 0.87
SDF4-206ENST00000478938 CACNG2Q9Y698 323 aa20.5■□□□□ 0.87
SDF4-206ENST00000478938 IFNA14P01570 189 aa20.49■□□□□ 0.87
SDF4-206ENST00000478938 C9P02748 559 aa20.49■□□□□ 0.87
SDF4-206ENST00000478938 ESR1P03372 595 aa20.49■□□□□ 0.87
SDF4-206ENST00000478938 S100A12P80511 92 aa20.49■□□□□ 0.87
SDF4-206ENST00000478938 BCL2L15Q5TBC7 163 aa20.49■□□□□ 0.87
SDF4-206ENST00000478938 KIAA0907Q7Z7F0 614 aaPredicted RBP20.49■□□□□ 0.87
SDF4-206ENST00000478938 ANKRD46Q86W74 232 aa20.49■□□□□ 0.87
SDF4-206ENST00000478938 PGBD3Q8N328 593 aa20.49■□□□□ 0.87
SDF4-206ENST00000478938 STAG3L4Q8TBR4 150 aa20.49■□□□□ 0.87
SDF4-206ENST00000478938 HSH2DQ96JZ2 352 aa20.49■□□□□ 0.87
SDF4-206ENST00000478938 OR52E6Q96RD3 313 aa20.49■□□□□ 0.87
SDF4-206ENST00000478938 TMEM184CQ9NVA4 438 aa20.49■□□□□ 0.87
SDF4-206ENST00000478938 SLCO1C1Q9NYB5 712 aa20.49■□□□□ 0.87
SDF4-206ENST00000478938 TMCC3Q9ULS5 477 aa20.49■□□□□ 0.87
SDF4-206ENST00000478938 CDH10Q9Y6N8 788 aa20.49■□□□□ 0.87
SDF4-206ENST00000478938 TRBV5-3A0A0A0MS03 114 aa20.49■□□□□ 0.87
SDF4-206ENST00000478938 MROH6A6NGR9 719 aa20.49■□□□□ 0.87
SDF4-206ENST00000478938 PRAMEF1O95521 474 aa20.49■□□□□ 0.87
SDF4-206ENST00000478938 HLA-DQB1P01920 261 aa20.49■□□□□ 0.87
SDF4-206ENST00000478938 SCG5P05408 212 aa20.49■□□□□ 0.87
SDF4-206ENST00000478938 HLA-DQB2P05538 268 aa20.49■□□□□ 0.87
SDF4-206ENST00000478938 CHRM5P08912 532 aaPredicted RBP20.49■□□□□ 0.87
SDF4-206ENST00000478938 INTS6LQ5JSJ4 861 aaKnown RBP20.49■□□□□ 0.87
SDF4-206ENST00000478938 FAM92BQ6ZTR7 304 aa20.49■□□□□ 0.87
SDF4-206ENST00000478938 SP8Q8IXZ3 490 aa20.49■□□□□ 0.87
SDF4-206ENST00000478938 OR56A4Q8NGH8 313 aa20.49■□□□□ 0.87
SDF4-206ENST00000478938 POF1BQ8WVV4 589 aa20.49■□□□□ 0.87
SDF4-206ENST00000478938 PDXPQ96GD0 296 aa20.49■□□□□ 0.87
SDF4-206ENST00000478938 MYO19Q96H55 970 aa20.49■□□□□ 0.87
SDF4-206ENST00000478938 FEVQ99581 238 aa20.49■□□□□ 0.87
SDF4-206ENST00000478938 SIK2Q9H0K1 926 aa20.49■□□□□ 0.87
SDF4-206ENST00000478938 MFSD2BA6NFX1 497 aa20.48■□□□□ 0.87
SDF4-206ENST00000478938 HMGN1P05114 100 aa20.48■□□□□ 0.87
SDF4-206ENST00000478938 CRYZQ08257 329 aaKnown RBP20.48■□□□□ 0.87
SDF4-206ENST00000478938 SLC39A12Q504Y0 691 aa20.48■□□□□ 0.87
SDF4-206ENST00000478938 CATSPERGQ6ZRH7 1159 aa20.48■□□□□ 0.87
SDF4-206ENST00000478938 RBFAQ8N0V3 343 aa20.48■□□□□ 0.87
SDF4-206ENST00000478938 STPG2Q8N412 459 aa20.48■□□□□ 0.87
SDF4-206ENST00000478938 OR8D4Q8NGM9 314 aa20.48■□□□□ 0.87
SDF4-206ENST00000478938 GPR150Q8NGU9 434 aa20.48■□□□□ 0.87
SDF4-206ENST00000478938 METTL6Q8TCB7 284 aa20.48■□□□□ 0.87
SDF4-206ENST00000478938 KIAA1191Q96A73 305 aa20.48■□□□□ 0.87
SDF4-206ENST00000478938 CXCL16Q9H2A7 254 aa20.48■□□□□ 0.87
SDF4-206ENST00000478938 TTYH1Q9H313 450 aaPredicted RBP20.48■□□□□ 0.87
SDF4-206ENST00000478938 OR51B5Q9H339 312 aa20.48■□□□□ 0.87
SDF4-206ENST00000478938 IMPAD1Q9NX62 359 aa20.48■□□□□ 0.87
SDF4-206ENST00000478938 CLEC2DQ9UHP7 191 aa20.48■□□□□ 0.87
SDF4-206ENST00000478938 LIPT1Q9Y234 373 aa20.48■□□□□ 0.87
SDF4-206ENST00000478938 F8W036 122 aa20.48■□□□□ 0.87
SDF4-206ENST00000478938 PSMA1P25786 263 aaKnown RBP20.48■□□□□ 0.87
SDF4-206ENST00000478938 FLI1Q01543 452 aaPredicted RBP20.48■□□□□ 0.87
SDF4-206ENST00000478938 ETFDHQ16134 617 aa20.48■□□□□ 0.87
SDF4-206ENST00000478938 ERICH5Q6P6B1 374 aa20.48■□□□□ 0.87
SDF4-206ENST00000478938 UCN3Q969E3 161 aa20.48■□□□□ 0.87
SDF4-206ENST00000478938 KIAA1143Q96AT1 154 aaPredicted RBP20.48■□□□□ 0.87
SDF4-206ENST00000478938 TSGA13Q96PP4 275 aa20.48■□□□□ 0.87
SDF4-206ENST00000478938 PPP1R16BQ96T49 567 aa20.48■□□□□ 0.87
SDF4-206ENST00000478938 INPP5KQ9BT40 448 aa20.48■□□□□ 0.87
SDF4-206ENST00000478938 FZD8Q9H461 694 aa20.48■□□□□ 0.87
SDF4-206ENST00000478938 NRBP2Q9NSY0 501 aa20.48■□□□□ 0.87
SDF4-206ENST00000478938 RLIMQ9NVW2 624 aa20.48■□□□□ 0.87
SDF4-206ENST00000478938 STUB1Q9UNE7 303 aa20.48■□□□□ 0.87
SDF4-206ENST00000478938 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.47■□□□□ 0.87
SDF4-206ENST00000478938 SLC30A4O14863 429 aa20.47■□□□□ 0.87
SDF4-206ENST00000478938 CCNDBP1O95273 360 aa20.47■□□□□ 0.87
SDF4-206ENST00000478938 TXNP10599 105 aaKnown RBP20.47■□□□□ 0.87
SDF4-206ENST00000478938 CXCL3P19876 107 aa20.47■□□□□ 0.87
SDF4-206ENST00000478938 RABGGTBP53611 331 aa20.47■□□□□ 0.87
SDF4-206ENST00000478938 ITGA1P56199 1179 aa20.47■□□□□ 0.87
SDF4-206ENST00000478938 WNT3AP56704 352 aa20.47■□□□□ 0.87
SDF4-206ENST00000478938 CNIH2Q6PI25 160 aa20.47■□□□□ 0.87
SDF4-206ENST00000478938 PAQR3Q6TCH7 311 aa20.47■□□□□ 0.87
SDF4-206ENST00000478938 ATRAIDQ6UW56 229 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms