RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 CAMKVQ8NCB2 501 aa16.09■□□□□ 0.17
VIM-204ENST00000478746 ZCCHC10Q8TBK6 192 aa16.09■□□□□ 0.17
VIM-204ENST00000478746 THAP11Q96EK4 314 aa16.09■□□□□ 0.17
VIM-204ENST00000478746 CCDC138Q96M89 665 aa16.09■□□□□ 0.17
VIM-204ENST00000478746 OR1F2PQ96R84 312 aa16.09■□□□□ 0.17
VIM-204ENST00000478746 POLDIP3Q9BY77 421 aaKnown RBP16.09■□□□□ 0.17
VIM-204ENST00000478746 RBCK1Q9BYM8 510 aa16.09■□□□□ 0.17
VIM-204ENST00000478746 LIME1Q9H400 295 aa16.09■□□□□ 0.17
VIM-204ENST00000478746 LANCL2Q9NS86 450 aa16.09■□□□□ 0.17
VIM-204ENST00000478746 TREX1Q9NSU2 369 aa16.09■□□□□ 0.17
VIM-204ENST00000478746 DUSP10Q9Y6W6 482 aa16.09■□□□□ 0.17
VIM-204ENST00000478746 FBN3Q75N90 2809 aa16.08■□□□□ 0.16
VIM-204ENST00000478746 FAM237BA0A1B0GVD1 139 aa16.08■□□□□ 0.16
VIM-204ENST00000478746 FCHO1O14526 889 aa16.08■□□□□ 0.16
VIM-204ENST00000478746 PFDN6O15212 129 aa16.08■□□□□ 0.16
VIM-204ENST00000478746 CTAG2O75638 210 aa16.08■□□□□ 0.16
VIM-204ENST00000478746 IFNB1P01574 187 aa16.08■□□□□ 0.16
VIM-204ENST00000478746 ESR1P03372 595 aa16.08■□□□□ 0.16
VIM-204ENST00000478746 APRTP07741 180 aa16.08■□□□□ 0.16
VIM-204ENST00000478746 SESN2P58004 480 aaPredicted RBP16.08■□□□□ 0.16
VIM-204ENST00000478746 KCNJ11Q14654 390 aa16.08■□□□□ 0.16
VIM-204ENST00000478746 EMC4Q5J8M3 183 aa16.08■□□□□ 0.16
VIM-204ENST00000478746 MRNIPQ6NTE8 343 aa16.08■□□□□ 0.16
VIM-204ENST00000478746 PAOXQ6QHF9 649 aa16.08■□□□□ 0.16
VIM-204ENST00000478746 PDSS2Q86YH6 399 aa16.08■□□□□ 0.16
VIM-204ENST00000478746 REXO1L1PQ8IX06 675 aa16.08■□□□□ 0.16
VIM-204ENST00000478746 CCDC170Q8IYT3 715 aa16.08■□□□□ 0.16
VIM-204ENST00000478746 CYP4X1Q8N118 509 aa16.08■□□□□ 0.16
VIM-204ENST00000478746 KCT2Q8NC54 265 aa16.08■□□□□ 0.16
VIM-204ENST00000478746 MYRIPQ8NFW9 859 aa16.08■□□□□ 0.16
VIM-204ENST00000478746 OR52N2Q8NGI0 321 aa16.08■□□□□ 0.16
VIM-204ENST00000478746 OR10Q1Q8NGQ4 319 aa16.08■□□□□ 0.16
VIM-204ENST00000478746 LPGAT1Q92604 370 aa16.08■□□□□ 0.16
VIM-204ENST00000478746 TM4SF19Q96DZ7 209 aa16.08■□□□□ 0.16
VIM-204ENST00000478746 PANX2Q96RD6 677 aa16.08■□□□□ 0.16
VIM-204ENST00000478746 DLL4Q9NR61 685 aa16.08■□□□□ 0.16
VIM-204ENST00000478746 RAB6BQ9NRW1 208 aa16.08■□□□□ 0.16
VIM-204ENST00000478746 EDARQ9UNE0 448 aa16.08■□□□□ 0.16
VIM-204ENST00000478746 RPH3AQ9Y2J0 694 aaPredicted RBP16.08■□□□□ 0.16
VIM-204ENST00000478746 CRYL1Q9Y2S2 319 aa16.08■□□□□ 0.16
VIM-204ENST00000478746 NAALAD2Q9Y3Q0 740 aa16.08■□□□□ 0.16
VIM-204ENST00000478746 DNAJC13O75165 2243 aa16.07■□□□□ 0.16
VIM-204ENST00000478746 TCRBV7S2A1N4TA0A589 114 aa16.07■□□□□ 0.16
VIM-204ENST00000478746 E5RI56 91 aa16.07■□□□□ 0.16
VIM-204ENST00000478746 DNASE1P24855 282 aa16.07■□□□□ 0.16
VIM-204ENST00000478746 NMBRP28336 390 aa16.07■□□□□ 0.16
VIM-204ENST00000478746 CRADDP78560 199 aa16.07■□□□□ 0.16
VIM-204ENST00000478746 TBX2Q13207 712 aaPredicted RBP16.07■□□□□ 0.16
VIM-204ENST00000478746 RNF187Q5TA31 235 aaPredicted RBP16.07■□□□□ 0.16
VIM-204ENST00000478746 LRRC56Q8IYG6 542 aaPredicted RBP16.07■□□□□ 0.16
VIM-204ENST00000478746 ZFP62Q8NB50 900 aaPredicted RBP16.07■□□□□ 0.16
VIM-204ENST00000478746 FBXO15Q8NCQ5 510 aaPredicted RBP16.07■□□□□ 0.16
VIM-204ENST00000478746 OR5M3Q8NGP4 307 aa16.07■□□□□ 0.16
VIM-204ENST00000478746 SLC13A3Q8WWT9 602 aa16.07■□□□□ 0.16
VIM-204ENST00000478746 TCF12Q99081 682 aa16.07■□□□□ 0.16
VIM-204ENST00000478746 DEFB126Q9BYW3 111 aa16.07■□□□□ 0.16
VIM-204ENST00000478746 DEFB127Q9H1M4 99 aa16.07■□□□□ 0.16
VIM-204ENST00000478746 PLSCR2Q9NRY7 297 aa16.07■□□□□ 0.16
VIM-204ENST00000478746 ZNF358Q9NW07 568 aa16.07■□□□□ 0.16
VIM-204ENST00000478746 AMFRQ9UKV5 643 aa16.07■□□□□ 0.16
VIM-204ENST00000478746 ZNF407Q9C0G0 2248 aa16.07■□□□□ 0.16
VIM-204ENST00000478746 FLNAP21333 2647 aaKnown RBP16.07■□□□□ 0.16
VIM-204ENST00000478746 FEZF1A0PJY2 475 aa16.06■□□□□ 0.16
VIM-204ENST00000478746 ZNF860A6NHJ4 632 aa16.06■□□□□ 0.16
VIM-204ENST00000478746 VAPBO95292 243 aa16.06■□□□□ 0.16
VIM-204ENST00000478746 FHP07954 510 aa16.06■□□□□ 0.16
VIM-204ENST00000478746 CYLC1P35663 651 aaPredicted RBP16.06■□□□□ 0.16
VIM-204ENST00000478746 ADARP55265 1226 aaKnown RBP16.06■□□□□ 0.16
VIM-204ENST00000478746 GXYLT1Q4G148 440 aa16.06■□□□□ 0.16
VIM-204ENST00000478746 ASPGQ86U10 573 aa16.06■□□□□ 0.16
VIM-204ENST00000478746 SLC26A11Q86WA9 606 aa16.06■□□□□ 0.16
VIM-204ENST00000478746 UBL4BQ8N7F7 174 aa16.06■□□□□ 0.16
VIM-204ENST00000478746 OR5T3Q8NGG3 340 aa16.06■□□□□ 0.16
VIM-204ENST00000478746 ASB11Q8WXH4 323 aa16.06■□□□□ 0.16
VIM-204ENST00000478746 ATG4AQ8WYN0 398 aa16.06■□□□□ 0.16
VIM-204ENST00000478746 TBC1D20Q96BZ9 403 aa16.06■□□□□ 0.16
VIM-204ENST00000478746 SLC6A16Q9GZN6 736 aa16.06■□□□□ 0.16
VIM-204ENST00000478746 L3MBTL1Q9Y468 752 aa16.06■□□□□ 0.16
VIM-204ENST00000478746 SLC22A7Q9Y694 548 aa16.06■□□□□ 0.16
VIM-204ENST00000478746 GOLGA8KD6RF30 607 aa16.05■□□□□ 0.16
VIM-204ENST00000478746 NPIPA2E9PIF3 369 aa16.05■□□□□ 0.16
VIM-204ENST00000478746 NPIPA3F8WFD2 350 aa16.05■□□□□ 0.16
VIM-204ENST00000478746 GOLGA8TH3BQL2 631 aa16.05■□□□□ 0.16
VIM-204ENST00000478746 PROM1O43490 865 aa16.05■□□□□ 0.16
VIM-204ENST00000478746 ZBTB14O43829 449 aa16.05■□□□□ 0.16
VIM-204ENST00000478746 LCMT2O60294 686 aaKnown RBP16.05■□□□□ 0.16
VIM-204ENST00000478746 B4GALT2O60909 372 aa16.05■□□□□ 0.16
VIM-204ENST00000478746 ETS1P14921 441 aa16.05■□□□□ 0.16
VIM-204ENST00000478746 JAK1P23458 1154 aa16.05■□□□□ 0.16
VIM-204ENST00000478746 NPY2RP49146 381 aa16.05■□□□□ 0.16
VIM-204ENST00000478746 DLX5P56178 289 aa16.05■□□□□ 0.16
VIM-204ENST00000478746 GPR85P60893 370 aa16.05■□□□□ 0.16
VIM-204ENST00000478746 ADAM8P78325 824 aa16.05■□□□□ 0.16
VIM-204ENST00000478746 LTBQ06643 244 aa16.05■□□□□ 0.16
VIM-204ENST00000478746 TYSND1Q2T9J0 566 aa16.05■□□□□ 0.16
VIM-204ENST00000478746 CAPN13Q6MZZ7 669 aaPredicted RBP16.05■□□□□ 0.16
VIM-204ENST00000478746 ARSKQ6UWY0 536 aa16.05■□□□□ 0.16
VIM-204ENST00000478746 PRUNE1Q86TP1 453 aa16.05■□□□□ 0.16
VIM-204ENST00000478746 ZZZ3Q8IYH5 903 aa16.05■□□□□ 0.16
VIM-204ENST00000478746 CYP4Z2PQ8N1L4 340 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms