RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 OTX2P32243 289 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 FOLR3P41439 243 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 CCNG1P51959 295 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 MAT1AQ00266 395 aaKnown RBP6.55□□□□□ -1.36
BRCA1-215ENST00000478531 MC1RQ01726 317 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 DDX39BQ13838 428 aaKnown RBP6.55□□□□□ -1.36
BRCA1-215ENST00000478531 RBBP7Q16576 425 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 HIST2H2ACQ16777 129 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-215ENST00000478531 SYT16Q17RD7 645 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 DEFB109BQ30KR1 87 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 GLIPR1L2Q4G1C9 344 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 PAGE2BQ5JRK9 111 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 TOR1AIP1Q5JTV8 583 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 GARNL3Q5VVW2 1013 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 PRAMEF9Q5VWM5 478 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 HIST2H2AA3Q6FI13 130 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 TMEM214Q6NUQ4 689 aaKnown RBP6.55□□□□□ -1.36
BRCA1-215ENST00000478531 PRMT9Q6P2P2 845 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 TMEM151BQ8IW70 566 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 SRRM1Q8IYB3 904 aaKnown RBP6.55□□□□□ -1.36
BRCA1-215ENST00000478531 RIBC1Q8N443 379 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-215ENST00000478531 CCDC63Q8NA47 563 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 EXTL1Q92935 676 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 ATP6V1E2Q96A05 226 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 EFCAB11Q9BUY7 163 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 IQCGQ9H095 443 aaKnown RBP6.55□□□□□ -1.36
BRCA1-215ENST00000478531 C12orf65Q9H3J6 166 aaKnown RBP6.55□□□□□ -1.36
BRCA1-215ENST00000478531 EHD1Q9H4M9 534 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 SOX17Q9H6I2 414 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-215ENST00000478531 IPPKQ9H8X2 491 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 ACTR8Q9H981 624 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 ANKHQ9HCJ1 492 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 SEMA4BQ9NPR2 832 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-215ENST00000478531 SLC22A11Q9NSA0 550 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 HCN3Q9P1Z3 774 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 TRPC4Q9UBN4 977 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 DCDC2Q9UHG0 476 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 TMCO1Q9UM00 188 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 TNPO3Q9Y5L0 923 aaKnown RBP6.55□□□□□ -1.36
BRCA1-215ENST00000478531 A0A0G2JN53 185 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 ANKDD1BA6NHY2 528 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 STX16-NPEPL1H3BU86 382 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 STX16O14662 325 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 FOXS1O43638 330 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 SH3BGRLO75368 114 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 RDH16O75452 317 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 TSPAN8P19075 237 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 AHRP35869 848 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 AVPR1BP47901 424 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 CCT5P48643 541 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 PIK3CGP48736 1102 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 EMP3P54852 163 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 RAB8AP61006 207 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 OCA2Q04671 838 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 ZNF844Q08AG5 666 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 PWP1Q13610 501 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 DSG2Q14126 1118 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 RASA2Q15283 850 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 PCBP2Q15366 365 aaKnown RBP eCLIP6.55□□□□□ -1.362e-7■■■□□ 17.1
BRCA1-215ENST00000478531 DEFB134Q4QY38 66 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 MFSD4BQ5TF39 518 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 MRPL14Q6P1L8 145 aaKnown RBP6.55□□□□□ -1.36
BRCA1-215ENST00000478531 ABHD13Q7L211 337 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 SYVN1Q86TM6 617 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 LCA5Q86VQ0 697 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 ARHGEF39Q8N4T4 335 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 AMER3Q8N944 861 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 TRPV3Q8NET8 790 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 TTLQ8NG68 377 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 OR52B6Q8NGF0 335 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 PPP4R1Q8TF05 950 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 FKBP10Q96AY3 582 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 TM4SF19Q96DZ7 209 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 MVB12AQ96EY5 273 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 ZIM3Q96PE6 472 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 CDK15Q96Q40 435 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 SARGQ9BW04 601 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 RBCK1Q9BYM8 510 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 ROPN1BQ9BZX4 212 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-215ENST00000478531 KLHL31Q9H511 634 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 NOL11Q9H8H0 719 aaKnown RBP6.55□□□□□ -1.36
BRCA1-215ENST00000478531 ROPN1Q9HAT0 212 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-215ENST00000478531 ENAMQ9NRM1 1142 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 ZNF282Q9UDV7 671 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-215ENST00000478531 LGALS13Q9UHV8 139 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 PCTPQ9UKL6 214 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 EMCNQ9ULC0 261 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 CDC14AQ9UNH5 594 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 MAN2B2Q9Y2E5 1009 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 NAALAD2Q9Y3Q0 740 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 PCSK5Q92824 1860 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 TNRC6AQ8NDV7 1962 aaKnown RBP6.54□□□□□ -1.36
BRCA1-215ENST00000478531 C4orf51C9J302 202 aa6.54□□□□□ -1.36
BRCA1-215ENST00000478531 RGS16O15492 202 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-215ENST00000478531 PRPF4O43172 522 aaKnown RBP eCLIP6.54□□□□□ -1.365e-17■■■■■ 29.7
BRCA1-215ENST00000478531 ERI3O43414 337 aaKnown RBP6.54□□□□□ -1.36
BRCA1-215ENST00000478531 DLX3O60479 287 aa6.54□□□□□ -1.36
BRCA1-215ENST00000478531 SPAG7O75391 227 aa6.54□□□□□ -1.36
BRCA1-215ENST00000478531 KLF7O75840 302 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-215ENST00000478531 WFS1O76024 890 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms