RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 SLC35F4A4IF30 521 aa12.24□□□□□ -0.45
RTFDC1-207ENST00000477573 PRSS47A8MTI9 375 aa12.24□□□□□ -0.45
RTFDC1-207ENST00000477573 TMEM189-UBE2V1I3L0A0 370 aa12.24□□□□□ -0.45
RTFDC1-207ENST00000477573 CDC7O00311 574 aa12.24□□□□□ -0.45
RTFDC1-207ENST00000477573 SLC16A6O15403 523 aa12.24□□□□□ -0.45
RTFDC1-207ENST00000477573 RGS10O43665 173 aa12.24□□□□□ -0.45
RTFDC1-207ENST00000477573 LTFP02788 710 aa12.24□□□□□ -0.45
RTFDC1-207ENST00000477573 CD72P21854 359 aa12.24□□□□□ -0.45
RTFDC1-207ENST00000477573 ACTR1BP42025 376 aa12.24□□□□□ -0.45
RTFDC1-207ENST00000477573 ATXN1P54253 815 aaKnown RBP12.24□□□□□ -0.45
RTFDC1-207ENST00000477573 TAS2R60P59551 318 aa12.24□□□□□ -0.45
RTFDC1-207ENST00000477573 PSPHP78330 225 aa12.24□□□□□ -0.45
RTFDC1-207ENST00000477573 PRKG2Q13237 762 aa12.24□□□□□ -0.45
RTFDC1-207ENST00000477573 COTL1Q14019 142 aa12.24□□□□□ -0.45
RTFDC1-207ENST00000477573 PRPSAP1Q14558 356 aa12.24□□□□□ -0.45
RTFDC1-207ENST00000477573 MBTPS1Q14703 1052 aa12.24□□□□□ -0.45
RTFDC1-207ENST00000477573 HFEQ30201 348 aa12.24□□□□□ -0.45
RTFDC1-207ENST00000477573 ZNF528Q3MIS6 628 aa12.24□□□□□ -0.45
RTFDC1-207ENST00000477573 CNSTQ6PJW8 725 aa12.24□□□□□ -0.45
RTFDC1-207ENST00000477573 RASSF6Q6ZTQ3 369 aa12.24□□□□□ -0.45
RTFDC1-207ENST00000477573 RTN4RL1Q86UN2 441 aaPredicted RBP12.24□□□□□ -0.45
RTFDC1-207ENST00000477573 PTRH1Q86Y79 214 aaKnown RBP12.24□□□□□ -0.45
RTFDC1-207ENST00000477573 RNF113BQ8IZP6 322 aaKnown RBP12.24□□□□□ -0.45
RTFDC1-207ENST00000477573 FAM181AQ8N9Y4 354 aa12.24□□□□□ -0.45
RTFDC1-207ENST00000477573 HASPINQ8TF76 798 aa12.24□□□□□ -0.45
RTFDC1-207ENST00000477573 NDRG1Q92597 394 aaKnown RBP12.24□□□□□ -0.45
RTFDC1-207ENST00000477573 CPNE4Q96A23 557 aaPredicted RBP12.24□□□□□ -0.45
RTFDC1-207ENST00000477573 TMEM41AQ96HV5 264 aa12.24□□□□□ -0.45
RTFDC1-207ENST00000477573 WDFY2Q96P53 400 aa12.24□□□□□ -0.45
RTFDC1-207ENST00000477573 KCTD15Q96SI1 283 aaPredicted RBP12.24□□□□□ -0.45
RTFDC1-207ENST00000477573 IL22Q9GZX6 179 aa12.24□□□□□ -0.45
RTFDC1-207ENST00000477573 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.24□□□□□ -0.45
RTFDC1-207ENST00000477573 ARNT2Q9HBZ2 717 aa12.24□□□□□ -0.45
RTFDC1-207ENST00000477573 KLHL1Q9NR64 748 aa12.24□□□□□ -0.45
RTFDC1-207ENST00000477573 MTMR10Q9NXD2 777 aa12.24□□□□□ -0.45
RTFDC1-207ENST00000477573 HCN2Q9UL51 889 aa12.24□□□□□ -0.45
RTFDC1-207ENST00000477573 MED16Q9Y2X0 877 aa12.24□□□□□ -0.45
RTFDC1-207ENST00000477573 PCDHGA12O60330 932 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 VPS26AO75436 327 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 LRIG2O94898 1065 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 WDR47O94967 919 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 LALBAP00709 142 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 SERPINF2P08697 491 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 USP17L7P0C7H9 530 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 TNFSF8P32971 234 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 PPP3CCP48454 512 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 FASTKQ14296 549 aaKnown RBP12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 FGFBP1Q14512 234 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 LARS2Q15031 903 aaKnown RBP12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 SSX2Q16385 188 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 MICBQ29980 383 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 TMEM44Q2T9K0 475 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 FLYWCH1Q4VC44 716 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 LRRC66Q68CR7 880 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 CD300LGQ6UXG3 332 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 RBM23Q86U06 439 aaKnown RBP12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 ZC3HC1Q86WB0 502 aaKnown RBP12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 ABI1Q8IZP0 508 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 SLC43A2Q8N370 569 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 MINDY1Q8N5J2 469 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 NTAN1Q96AB6 310 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 MBOAT4Q96T53 435 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 SLC30A3Q99726 388 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 SRRQ9GZT4 340 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 PLAC1Q9HBJ0 212 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 TMEM161AQ9NX61 479 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 C3orf18Q9UK00 162 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 MGAT4AQ9UM21 535 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 TSC2P49815 1807 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 FRMPD3Q5JV73 1810 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 SYNJ2BP-COX16A0A087WUM0 186 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 LOC100130705A0A1B0GUX0 176 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 YJEFN3A6XGL0 299 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 TARM1B6A8C7 271 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 HHLA1C9JL84 531 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 UBXN8O00124 270 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 DFFAO00273 331 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 SULT1C2O00338 296 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 NME4O00746 187 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 KIAA0355O15063 1070 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 BRINP1O60477 761 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 MMP20O60882 483 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 SLC43A1O75387 559 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 FGF2P09038 288 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 OGNP20774 298 aaKnown RBP12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 CAPN3P20807 821 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 MPSTP25325 297 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 SPRP35270 261 aaPredicted RBP12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 KIR2DL3P43628 341 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 RPA4Q13156 261 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 TEAD4Q15561 434 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 RFX4Q33E94 735 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 PDZK1Q5T2W1 519 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 PDZD4Q76G19 769 aaPredicted RBP12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 HSD17B13Q7Z5P4 300 aaPredicted RBP12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 MCATQ8IVS2 390 aaKnown RBP12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 C12orf45Q8N5I9 185 aaPredicted RBP12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 DUSP18Q8NEJ0 188 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 ITFG1Q8TB96 612 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 ZNF436Q9C0F3 470 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms