RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 CST9Q5W186 159 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 TBC1D9BQ66K14 1250 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 C18orf63Q68DL7 685 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 SIGIRRQ6IA17 410 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 NCAPH2Q6IBW4 605 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 PRR27Q6MZM9 219 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 ANKRD16Q6P6B7 361 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 BLOC1S2Q6QNY1 142 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 LINC00114Q6XXX2 140 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 CDHR3Q6ZTQ4 885 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 Q6ZUG5 572 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 TRMT10CQ7L0Y3 403 aaKnown RBP2.76□□□□□ -1.97
HMGN4-202ENST00000477243 LINGO2Q7L985 606 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 TRPM8Q7Z2W7 1104 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 C16orf62Q7Z3J2 963 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 ADGRE4PQ86SQ3 457 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 ASPGQ86U10 573 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 CCDC190Q86UF4 302 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 HAPLN4Q86UW8 402 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 IGFN1Q86VF2 1251 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 TPRA1Q86W33 373 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 AMIGO1Q86WK6 493 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 MEX3DQ86XN8 651 aaKnown RBP2.76□□□□□ -1.97
HMGN4-202ENST00000477243 TMC8Q8IU68 726 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 NKAIN4Q8IVV8 208 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 FOXRED2Q8IWF2 684 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 SHISA5Q8N114 240 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 CADM3Q8N126 398 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 LRRC75A-AS1Q8N1F1 130 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 ARHGAP24Q8N264 748 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 LCORLQ8N3X6 602 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 RYBPQ8N488 228 aaPredicted RBP2.76□□□□□ -1.97
HMGN4-202ENST00000477243 TRPV3Q8NET8 790 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 OR4C5Q8NGB2 326 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 OR8J1Q8NGP2 316 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 WDR20Q8TBZ3 569 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 HDAC7Q8WUI4 952 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 PDCD6IPQ8WUM4 868 aaKnown RBP2.76□□□□□ -1.97
HMGN4-202ENST00000477243 FAR1Q8WVX9 515 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 GLG1Q92896 1179 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 TMIGD2Q96BF3 282 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 SPDL1Q96EA4 605 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 EGLN2Q96KS0 407 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 ZNF512Q96ME7 567 aaPredicted RBP2.76□□□□□ -1.97
HMGN4-202ENST00000477243 SPATA33Q96N06 139 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 TSNARE1Q96NA8 513 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 ZNF583Q96ND8 569 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 PANX2Q96RD6 677 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 SNX18Q96RF0 628 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 KCNS3Q9BQ31 491 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 MXRA8Q9BRK3 442 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 ALKBH7Q9BT30 221 aaPredicted RBP2.76□□□□□ -1.97
HMGN4-202ENST00000477243 TMEM43Q9BTV4 400 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 TRMOQ9BU70 441 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 C11orf84Q9BUA3 381 aaPredicted RBP2.76□□□□□ -1.97
HMGN4-202ENST00000477243 MSTO1Q9BUK6 570 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 TRIM62Q9BVG3 475 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 SPZ1Q9BXG8 430 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 WWTR1Q9GZV5 400 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 TKTL2Q9H0I9 626 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 DNTTIP1Q9H147 329 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 SMYD3Q9H7B4 428 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 EVA1AQ9H8M9 152 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 L2HGDHQ9H9P8 463 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 CDH20Q9HBT6 801 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 CPNE5Q9HCH3 593 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 MSL2Q9HCI7 577 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 YAE1D1Q9NRH1 226 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 TMEM51Q9NW97 253 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 EHD3Q9NZN3 535 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 FLRT1Q9NZU1 646 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 HACD3Q9P035 362 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 TXNDC16Q9P2K2 825 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 STX18Q9P2W9 335 aaKnown RBP2.76□□□□□ -1.97
HMGN4-202ENST00000477243 OR14J1Q9UGF5 321 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 CHRNA9Q9UGM1 479 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 SH2B3Q9UQQ2 575 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 ZBTB32Q9Y2Y4 487 aaPredicted RBP2.76□□□□□ -1.97
HMGN4-202ENST00000477243 GRIP1Q9Y3R0 1128 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 OR10H1Q9Y4A9 318 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 HCFC2Q9Y5Z7 792 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 BZW2Q9Y6E2 419 aaKnown RBP2.76□□□□□ -1.97
HMGN4-202ENST00000477243 RNF215Q9Y6U7 377 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 COL14A1Q05707 1796 aaKnown RBP2.76□□□□□ -1.97
HMGN4-202ENST00000477243 CEP152O94986 1710 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 XRN1Q8IZH2 1706 aaKnown RBP2.76□□□□□ -1.97
HMGN4-202ENST00000477243 DMXL1Q9Y485 3027 aa2.76□□□□□ -1.97
HMGN4-202ENST00000477243 FLT4P35916 1363 aa2.75□□□□□ -1.97
HMGN4-202ENST00000477243 ZANQ9Y493 2812 aa2.75□□□□□ -1.97
HMGN4-202ENST00000477243 A0A087WUV0 522 aaPredicted RBP2.75□□□□□ -1.97
HMGN4-202ENST00000477243 A0A087X0K7 114 aa2.75□□□□□ -1.97
HMGN4-202ENST00000477243 A0A096LPK6 155 aa2.75□□□□□ -1.97
HMGN4-202ENST00000477243 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.75□□□□□ -1.97
HMGN4-202ENST00000477243 LOC101059948A0A1B0GTJ6 334 aa2.75□□□□□ -1.97
HMGN4-202ENST00000477243 A0A1B0GTW7 788 aa2.75□□□□□ -1.97
HMGN4-202ENST00000477243 OR14I1A6ND48 311 aa2.75□□□□□ -1.97
HMGN4-202ENST00000477243 FAM90A10PA6NDY2 464 aa2.75□□□□□ -1.97
HMGN4-202ENST00000477243 OR6C65A6NJZ3 312 aa2.75□□□□□ -1.97
HMGN4-202ENST00000477243 SUPT3HB4E1H0 165 aa2.75□□□□□ -1.97
HMGN4-202ENST00000477243 TARM1B6A8C7 271 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms