RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.88□□□□□ -0.35
HDAC7-221ENST00000477203 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.88□□□□□ -0.35
HDAC7-221ENST00000477203 PIPSLA2A3N6 862 aa12.88□□□□□ -0.35
HDAC7-221ENST00000477203 MYO1GB0I1T2 1018 aa12.88□□□□□ -0.35
HDAC7-221ENST00000477203 hCG_2039718K7EN88 272 aa12.88□□□□□ -0.35
HDAC7-221ENST00000477203 HTR1EP28566 365 aa12.88□□□□□ -0.35
HDAC7-221ENST00000477203 ITGADQ13349 1161 aa12.88□□□□□ -0.35
HDAC7-221ENST00000477203 CARTPTQ16568 116 aa12.88□□□□□ -0.35
HDAC7-221ENST00000477203 RUNDC3AQ59EK9 446 aa12.88□□□□□ -0.35
HDAC7-221ENST00000477203 FAM46CQ5VWP2 391 aa12.88□□□□□ -0.35
HDAC7-221ENST00000477203 LIPJQ5W064 366 aa12.88□□□□□ -0.35
HDAC7-221ENST00000477203 SZRD1Q7Z422 152 aa12.88□□□□□ -0.35
HDAC7-221ENST00000477203 VTCN1Q7Z7D3 282 aa12.88□□□□□ -0.35
HDAC7-221ENST00000477203 SLC44A2Q8IWA5 706 aaPredicted RBP12.88□□□□□ -0.35
HDAC7-221ENST00000477203 ZNF548Q8NEK5 533 aaPredicted RBP12.88□□□□□ -0.35
HDAC7-221ENST00000477203 OR56A3Q8NH54 315 aa12.88□□□□□ -0.35
HDAC7-221ENST00000477203 TMBIM1Q969X1 311 aa12.88□□□□□ -0.35
HDAC7-221ENST00000477203 TPD52L3Q96J77 140 aa12.88□□□□□ -0.35
HDAC7-221ENST00000477203 PCDHGA11Q9Y5H2 935 aa12.88□□□□□ -0.35
HDAC7-221ENST00000477203 CABIN1Q9Y6J0 2220 aa12.87□□□□□ -0.35
HDAC7-221ENST00000477203 WASHC1A8K0Z3 465 aa12.87□□□□□ -0.35
HDAC7-221ENST00000477203 PSMD11O00231 422 aa12.87□□□□□ -0.35
HDAC7-221ENST00000477203 CLIC1O00299 241 aa12.87□□□□□ -0.35
HDAC7-221ENST00000477203 KLF8O95600 359 aaPredicted RBP12.87□□□□□ -0.35
HDAC7-221ENST00000477203 EGFP01133 1207 aa12.87□□□□□ -0.35
HDAC7-221ENST00000477203 OPN1SWP03999 348 aa12.87□□□□□ -0.35
HDAC7-221ENST00000477203 GGT1P19440 569 aa12.87□□□□□ -0.35
HDAC7-221ENST00000477203 COL9A1P20849 921 aa12.87□□□□□ -0.35
HDAC7-221ENST00000477203 RAE1P78406 368 aaKnown RBP12.87□□□□□ -0.35
HDAC7-221ENST00000477203 SPESP1Q6UW49 350 aa12.87□□□□□ -0.35
HDAC7-221ENST00000477203 WASH2PQ6VEQ5 465 aa12.87□□□□□ -0.35
HDAC7-221ENST00000477203 ZNF852Q6ZMS4 543 aa12.87□□□□□ -0.35
HDAC7-221ENST00000477203 LRRTM4Q86VH4 590 aa12.87□□□□□ -0.35
HDAC7-221ENST00000477203 MARVELD2Q8N4S9 558 aa12.87□□□□□ -0.35
HDAC7-221ENST00000477203 SCAIQ8N9R8 606 aa12.87□□□□□ -0.35
HDAC7-221ENST00000477203 CSGALNACT1Q8TDX6 532 aa12.87□□□□□ -0.35
HDAC7-221ENST00000477203 MRPL38Q96DV4 380 aaKnown RBP12.87□□□□□ -0.35
HDAC7-221ENST00000477203 OSBPL10Q9BXB5 764 aa12.87□□□□□ -0.35
HDAC7-221ENST00000477203 RMND5AQ9H871 391 aa12.87□□□□□ -0.35
HDAC7-221ENST00000477203 ARMC1Q9NVT9 282 aa12.87□□□□□ -0.35
HDAC7-221ENST00000477203 CDC14AQ9UNH5 594 aa12.87□□□□□ -0.35
HDAC7-221ENST00000477203 PCDHB3Q9Y5E6 796 aa12.87□□□□□ -0.35
HDAC7-221ENST00000477203 K7EQS6 105 aa12.87□□□□□ -0.35
HDAC7-221ENST00000477203 CST1P01037 141 aa12.87□□□□□ -0.35
HDAC7-221ENST00000477203 SLC35G4P0C7Q5 338 aa12.87□□□□□ -0.35
HDAC7-221ENST00000477203 PRPS2P11908 318 aa12.87□□□□□ -0.35
HDAC7-221ENST00000477203 TMEM196Q5HYL7 178 aa12.87□□□□□ -0.35
HDAC7-221ENST00000477203 PRAMEF14Q5SWL7 426 aa12.87□□□□□ -0.35
HDAC7-221ENST00000477203 CPTPQ5TA50 214 aa12.87□□□□□ -0.35
HDAC7-221ENST00000477203 PRAMEF13Q5VWM6 474 aa12.87□□□□□ -0.35
HDAC7-221ENST00000477203 COMMD6Q7Z4G1 85 aa12.87□□□□□ -0.35
HDAC7-221ENST00000477203 GLB1L3Q8NCI6 653 aaPredicted RBP12.87□□□□□ -0.35
HDAC7-221ENST00000477203 OR2L2Q8NH16 312 aa12.87□□□□□ -0.35
HDAC7-221ENST00000477203 SLC5A11Q8WWX8 675 aa12.87□□□□□ -0.35
HDAC7-221ENST00000477203 HPS1Q92902 700 aa12.87□□□□□ -0.35
HDAC7-221ENST00000477203 SLC47A1Q96FL8 570 aa12.87□□□□□ -0.35
HDAC7-221ENST00000477203 F2RL3Q96RI0 385 aa12.87□□□□□ -0.35
HDAC7-221ENST00000477203 DUSP26Q9BV47 211 aa12.87□□□□□ -0.35
HDAC7-221ENST00000477203 ABCG4Q9H172 646 aa12.87□□□□□ -0.35
HDAC7-221ENST00000477203 KAT8Q9H7Z6 458 aaKnown RBP12.87□□□□□ -0.35
HDAC7-221ENST00000477203 MAGEL2Q9UJ55 1249 aa12.87□□□□□ -0.35
HDAC7-221ENST00000477203 RAB26Q9ULW5 256 aa12.87□□□□□ -0.35
HDAC7-221ENST00000477203 SNX8Q9Y5X2 465 aa12.87□□□□□ -0.35
HDAC7-221ENST00000477203 COL4A3Q01955 1670 aa12.87□□□□□ -0.35
HDAC7-221ENST00000477203 TICRRQ7Z2Z1 1910 aa12.87□□□□□ -0.35
HDAC7-221ENST00000477203 CXorf51AA0A1B0GTR3 108 aa12.86□□□□□ -0.35
HDAC7-221ENST00000477203 SOBPA7XYQ1 873 aa12.86□□□□□ -0.35
HDAC7-221ENST00000477203 CREG1O75629 220 aa12.86□□□□□ -0.35
HDAC7-221ENST00000477203 FKBP9O95302 570 aa12.86□□□□□ -0.35
HDAC7-221ENST00000477203 ASGR2P07307 311 aa12.86□□□□□ -0.35
HDAC7-221ENST00000477203 HOXB3P14651 431 aaPredicted RBP12.86□□□□□ -0.35
HDAC7-221ENST00000477203 TNFRSF1BP20333 461 aa12.86□□□□□ -0.35
HDAC7-221ENST00000477203 SOAT1P35610 550 aa12.86□□□□□ -0.35
HDAC7-221ENST00000477203 CCT8P50990 548 aa12.86□□□□□ -0.35
HDAC7-221ENST00000477203 TAS2R50P59544 299 aa12.86□□□□□ -0.35
HDAC7-221ENST00000477203 PPP2CBP62714 309 aa12.86□□□□□ -0.35
HDAC7-221ENST00000477203 PPP2CAP67775 309 aa12.86□□□□□ -0.35
HDAC7-221ENST00000477203 C2orf80Q0P641 193 aa12.86□□□□□ -0.35
HDAC7-221ENST00000477203 FAM98BQ52LJ0 330 aaKnown RBP12.86□□□□□ -0.35
HDAC7-221ENST00000477203 ZNF385BQ569K4 471 aa12.86□□□□□ -0.35
HDAC7-221ENST00000477203 GRHL2Q6ISB3 625 aa12.86□□□□□ -0.35
HDAC7-221ENST00000477203 NEK10Q6ZWH5 1172 aa12.86□□□□□ -0.35
HDAC7-221ENST00000477203 FKBP9P1Q75LS8 142 aa12.86□□□□□ -0.35
HDAC7-221ENST00000477203 MICU2Q8IYU8 434 aa12.86□□□□□ -0.35
HDAC7-221ENST00000477203 Q8N9G6 341 aaPredicted RBP12.86□□□□□ -0.35
HDAC7-221ENST00000477203 PLEKHA8Q96JA3 519 aa12.86□□□□□ -0.35
HDAC7-221ENST00000477203 KLHL25Q9H0H3 589 aa12.86□□□□□ -0.35
HDAC7-221ENST00000477203 PRDM8Q9NQV8 689 aa12.86□□□□□ -0.35
HDAC7-221ENST00000477203 KIAA1549LQ6ZVL6 1849 aa12.86□□□□□ -0.35
HDAC7-221ENST00000477203 POM121BA6NF01 834 aa12.86□□□□□ -0.35
HDAC7-221ENST00000477203 EVPLLA8MZ36 301 aa12.86□□□□□ -0.35
HDAC7-221ENST00000477203 GPIP06744 558 aa12.86□□□□□ -0.35
HDAC7-221ENST00000477203 HOXB2P14652 356 aa12.86□□□□□ -0.35
HDAC7-221ENST00000477203 ACPPP15309 386 aa12.86□□□□□ -0.35
HDAC7-221ENST00000477203 MAPK1P28482 360 aa12.86□□□□□ -0.35
HDAC7-221ENST00000477203 BNIP3Q12983 259 aa12.86□□□□□ -0.35
HDAC7-221ENST00000477203 GGTA1PQ4G0N0 100 aa12.86□□□□□ -0.35
HDAC7-221ENST00000477203 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.86□□□□□ -0.35
HDAC7-221ENST00000477203 PTRH1Q86Y79 214 aaKnown RBP12.86□□□□□ -0.35
HDAC7-221ENST00000477203 HM13Q8TCT9 377 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms