RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 ANKRD26P1Q6NSI1 321 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 KIAA2013Q8IYS2 634 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 FAM156AQ8NDB6 213 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 SLC13A3Q8WWT9 602 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 SLC22A18Q96BI1 424 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 CCDC124Q96CT7 223 aaKnown RBP13.81□□□□□ -0.2
COL4A6-206ENST00000477085 ZBTB18Q99592 522 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 ERVMER34-1Q9H9K5 563 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 SERHLQ9NQF3 203 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 FSCN3Q9NQT6 498 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 SLC6A13Q9NSD5 602 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 NMRK1Q9NWW6 199 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 CMTM6Q9NX76 183 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 NDE1Q9NXR1 346 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 CD300AQ9UGN4 299 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 SNX7Q9UNH6 387 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 POMPQ9Y244 141 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 PCDHGA4Q9Y5G9 962 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 AP1M2Q9Y6Q5 423 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 SPAG17Q6Q759 2223 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 SNRNP200O75643 2136 aaKnown RBP13.81□□□□□ -0.2
COL4A6-206ENST00000477085 A0A1B0GTW7 788 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 DYTNA2CJ06 578 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 FAM221BA6H8Z2 402 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 OR5K3A6NET4 321 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 GABRR3A8MPY1 467 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 NME4O00746 187 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 SCN2BO60939 215 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 CLEC3AO75596 197 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 ATP6V1G2O95670 118 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 PVRP15151 417 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 PRPS1L1P21108 318 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 HRH2P25021 359 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 SERPINB1P30740 379 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 ERFP50548 548 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 SLC7A2P52569 658 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 PHEXP78562 749 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 MC1RQ01726 317 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 CYP4F3Q08477 520 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 RIPK1Q13546 671 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 PRSS53Q2L4Q9 553 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 PGS1Q32NB8 556 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 TRMT5Q32P41 509 aaKnown RBP13.81□□□□□ -0.2
COL4A6-206ENST00000477085 WASHC2DQ5SRD0 308 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 SPESP1Q6UW49 350 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 VN1R4Q7Z5H5 301 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 NET1Q7Z628 596 aaPredicted RBP13.81□□□□□ -0.2
COL4A6-206ENST00000477085 SLC15A3Q8IY34 581 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 MFSD9Q8NBP5 474 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 DNAJB14Q8TBM8 379 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 C16orf78Q8WTQ4 265 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 HOPXQ9BPY8 73 aaPredicted RBP13.81□□□□□ -0.2
COL4A6-206ENST00000477085 ADA2Q9NZK5 511 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 PILRAQ9UKJ1 303 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 DOLKQ9UPQ8 538 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 PCDHA9Q9Y5H5 950 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 HEATR5BQ9P2D3 2071 aa13.8□□□□□ -0.2
COL4A6-206ENST00000477085 SDK1Q7Z5N4 2213 aa13.8□□□□□ -0.2
COL4A6-206ENST00000477085 GNG14A0A1W2PPG7 69 aa13.8□□□□□ -0.2
COL4A6-206ENST00000477085 C2orf74A8MZ97 194 aa13.8□□□□□ -0.2
COL4A6-206ENST00000477085 MYO1DO94832 1006 aa13.8□□□□□ -0.2
COL4A6-206ENST00000477085 SEMA3DO95025 777 aa13.8□□□□□ -0.2
COL4A6-206ENST00000477085 SERPIND1P05546 499 aa13.8□□□□□ -0.2
COL4A6-206ENST00000477085 LAMP1P11279 417 aa13.8□□□□□ -0.2
COL4A6-206ENST00000477085 PIM1P11309 404 aaPredicted RBP13.8□□□□□ -0.2
COL4A6-206ENST00000477085 RABL3Q5HYI8 236 aa13.8□□□□□ -0.2
COL4A6-206ENST00000477085 FIGLAQ6QHK4 219 aa13.8□□□□□ -0.2
COL4A6-206ENST00000477085 DGLUCYQ7Z3D6 616 aa13.8□□□□□ -0.2
COL4A6-206ENST00000477085 MSRB3Q8IXL7 192 aa13.8□□□□□ -0.2
COL4A6-206ENST00000477085 RBM12BQ8IXT5 1001 aaKnown RBP13.8□□□□□ -0.2
COL4A6-206ENST00000477085 MMP21Q8N119 569 aa13.8□□□□□ -0.2
COL4A6-206ENST00000477085 CDC26Q8NHZ8 85 aa13.8□□□□□ -0.2
COL4A6-206ENST00000477085 TMEM125Q96AQ2 219 aa13.8□□□□□ -0.2
COL4A6-206ENST00000477085 TEFMQ96QE5 360 aaKnown RBP13.8□□□□□ -0.2
COL4A6-206ENST00000477085 OR52E6Q96RD3 313 aa13.8□□□□□ -0.2
COL4A6-206ENST00000477085 INPP5KQ9BT40 448 aa13.8□□□□□ -0.2
COL4A6-206ENST00000477085 SPAG4Q9NPE6 437 aa13.8□□□□□ -0.2
COL4A6-206ENST00000477085 GID8Q9NWU2 228 aa13.8□□□□□ -0.2
COL4A6-206ENST00000477085 ABCD2Q9UBJ2 740 aa13.8□□□□□ -0.2
COL4A6-206ENST00000477085 KLK4Q9Y5K2 254 aa13.8□□□□□ -0.2
COL4A6-206ENST00000477085 ENTPD2Q9Y5L3 495 aa13.8□□□□□ -0.2
COL4A6-206ENST00000477085 A0A0G2JN53 185 aa13.79□□□□□ -0.2
COL4A6-206ENST00000477085 NDUFS4O43181 175 aa13.79□□□□□ -0.2
COL4A6-206ENST00000477085 SH3BP5O60239 455 aa13.79□□□□□ -0.2
COL4A6-206ENST00000477085 PRMT3O60678 531 aa13.79□□□□□ -0.2
COL4A6-206ENST00000477085 C1QCP02747 245 aa13.79□□□□□ -0.2
COL4A6-206ENST00000477085 ANXA6P08133 673 aa13.79□□□□□ -0.2
COL4A6-206ENST00000477085 HOXB9P17482 250 aaPredicted RBP13.79□□□□□ -0.2
COL4A6-206ENST00000477085 TCN1P20061 433 aaPredicted RBP13.79□□□□□ -0.2
COL4A6-206ENST00000477085 PTPN6P29350 595 aa13.79□□□□□ -0.2
COL4A6-206ENST00000477085 GRK3P35626 688 aa13.79□□□□□ -0.2
COL4A6-206ENST00000477085 AHRP35869 848 aa13.79□□□□□ -0.2
COL4A6-206ENST00000477085 CLNS1AP54105 237 aaKnown RBP13.79□□□□□ -0.2
COL4A6-206ENST00000477085 ACTR3P61158 418 aa13.79□□□□□ -0.2
COL4A6-206ENST00000477085 CCNIQ14094 377 aa13.79□□□□□ -0.2
COL4A6-206ENST00000477085 SELPLGQ14242 412 aa13.79□□□□□ -0.2
COL4A6-206ENST00000477085 TEAD4Q15561 434 aa13.79□□□□□ -0.2
COL4A6-206ENST00000477085 SLC5A12Q1EHB4 618 aa13.79□□□□□ -0.2
COL4A6-206ENST00000477085 ADPRMQ3LIE5 342 aa13.79□□□□□ -0.2
COL4A6-206ENST00000477085 OR4F3Q6IEY1 312 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms