RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 POLDIP3Q9BY77 421 aaKnown RBP10.65□□□□□ -0.7
BRCA1-213ENST00000476777 RBCK1Q9BYM8 510 aa10.65□□□□□ -0.7
BRCA1-213ENST00000476777 ETNK1Q9HBU6 452 aa10.65□□□□□ -0.7
BRCA1-213ENST00000476777 CHRAC1Q9NRG0 131 aa10.65□□□□□ -0.7
BRCA1-213ENST00000476777 PLEKHA6Q9Y2H5 1048 aa10.65□□□□□ -0.7
BRCA1-213ENST00000476777 KLF13Q9Y2Y9 288 aaPredicted RBP10.65□□□□□ -0.7
BRCA1-213ENST00000476777 GTF3C3Q9Y5Q9 886 aa10.65□□□□□ -0.7
BRCA1-213ENST00000476777 FBN1P35555 2871 aaKnown RBP10.65□□□□□ -0.7
BRCA1-213ENST00000476777 MXRA5Q9NR99 2828 aa10.64□□□□□ -0.71
BRCA1-213ENST00000476777 SYCE3A1L190 88 aa10.64□□□□□ -0.71
BRCA1-213ENST00000476777 ZNF839A8K0R7 811 aa10.64□□□□□ -0.71
BRCA1-213ENST00000476777 KLRC4-KLRK1H3BQV0 150 aa10.64□□□□□ -0.71
BRCA1-213ENST00000476777 SMAPO00193 183 aa10.64□□□□□ -0.71
BRCA1-213ENST00000476777 PEX1O43933 1283 aa10.64□□□□□ -0.71
BRCA1-213ENST00000476777 KIF5CO60282 957 aa10.64□□□□□ -0.71
BRCA1-213ENST00000476777 NIPSNAP2O75323 286 aa10.64□□□□□ -0.71
BRCA1-213ENST00000476777 RDH16O75452 317 aa10.64□□□□□ -0.71
BRCA1-213ENST00000476777 NDUFS3O75489 264 aa10.64□□□□□ -0.71
BRCA1-213ENST00000476777 PDE9AO76083 593 aa10.64□□□□□ -0.71
BRCA1-213ENST00000476777 TPM1P09493 284 aa10.64□□□□□ -0.71
BRCA1-213ENST00000476777 CETN2P41208 172 aa10.64□□□□□ -0.71
BRCA1-213ENST00000476777 OR4D2P58180 307 aa10.64□□□□□ -0.71
BRCA1-213ENST00000476777 MPP1Q00013 466 aa10.64□□□□□ -0.71
BRCA1-213ENST00000476777 ACSBG2Q5FVE4 666 aa10.64□□□□□ -0.71
BRCA1-213ENST00000476777 ACAD11Q709F0 780 aa10.64□□□□□ -0.71
BRCA1-213ENST00000476777 BIVMQ86UB2 503 aa10.64□□□□□ -0.71
BRCA1-213ENST00000476777 ARMC10Q8N2F6 343 aa10.64□□□□□ -0.71
BRCA1-213ENST00000476777 ZCCHC10Q8TBK6 192 aa10.64□□□□□ -0.71
BRCA1-213ENST00000476777 FAM136AQ96C01 138 aa10.64□□□□□ -0.71
BRCA1-213ENST00000476777 PEX11GQ96HA9 241 aa10.64□□□□□ -0.71
BRCA1-213ENST00000476777 OR1F2PQ96R84 312 aa10.64□□□□□ -0.71
BRCA1-213ENST00000476777 ANKHQ9HCJ1 492 aa10.64□□□□□ -0.71
BRCA1-213ENST00000476777 FAM114A2Q9NRY5 505 aa10.64□□□□□ -0.71
BRCA1-213ENST00000476777 TREX1Q9NSU2 369 aa10.64□□□□□ -0.71
BRCA1-213ENST00000476777 ABCF3Q9NUQ8 709 aa10.64□□□□□ -0.71
BRCA1-213ENST00000476777 GALPQ9UBC7 116 aa10.64□□□□□ -0.71
BRCA1-213ENST00000476777 PCDHA13Q9Y5I0 950 aa10.64□□□□□ -0.71
BRCA1-213ENST00000476777 SONP18583 2426 aaKnown RBP10.63□□□□□ -0.71
BRCA1-213ENST00000476777 GOLGA6L9A6NEM1 432 aa10.63□□□□□ -0.71
BRCA1-213ENST00000476777 CATP04040 527 aaKnown RBP10.63□□□□□ -0.71
BRCA1-213ENST00000476777 IL10P22301 178 aa10.63□□□□□ -0.71
BRCA1-213ENST00000476777 DNASE1P24855 282 aa10.63□□□□□ -0.71
BRCA1-213ENST00000476777 FMO4P31512 558 aa10.63□□□□□ -0.71
BRCA1-213ENST00000476777 RPS15AP62244 130 aaKnown RBP10.63□□□□□ -0.71
BRCA1-213ENST00000476777 KLF1Q13351 362 aaPredicted RBP10.63□□□□□ -0.71
BRCA1-213ENST00000476777 KCNJ11Q14654 390 aa10.63□□□□□ -0.71
BRCA1-213ENST00000476777 KLHL38Q2WGJ6 581 aa10.63□□□□□ -0.71
BRCA1-213ENST00000476777 GXYLT1Q4G148 440 aa10.63□□□□□ -0.71
BRCA1-213ENST00000476777 Q71RC1 249 aaPredicted RBP10.63□□□□□ -0.71
BRCA1-213ENST00000476777 ZZZ3Q8IYH5 903 aa10.63□□□□□ -0.71
BRCA1-213ENST00000476777 KCT2Q8NC54 265 aa10.63□□□□□ -0.71
BRCA1-213ENST00000476777 PPHLN1Q8NEY8 458 aaKnown RBP10.63□□□□□ -0.71
BRCA1-213ENST00000476777 MYRIPQ8NFW9 859 aa10.63□□□□□ -0.71
BRCA1-213ENST00000476777 OR5T3Q8NGG3 340 aa10.63□□□□□ -0.71
BRCA1-213ENST00000476777 OR5M3Q8NGP4 307 aa10.63□□□□□ -0.71
BRCA1-213ENST00000476777 LPGAT1Q92604 370 aa10.63□□□□□ -0.71
BRCA1-213ENST00000476777 MBD6Q96DN6 1003 aa10.63□□□□□ -0.71
BRCA1-213ENST00000476777 TM4SF19Q96DZ7 209 aa10.63□□□□□ -0.71
BRCA1-213ENST00000476777 THAP11Q96EK4 314 aa10.63□□□□□ -0.71
BRCA1-213ENST00000476777 RMND5BQ96G75 393 aaPredicted RBP10.63□□□□□ -0.71
BRCA1-213ENST00000476777 SMR3AQ99954 134 aa10.63□□□□□ -0.71
BRCA1-213ENST00000476777 GPATCH1Q9BRR8 931 aaKnown RBP10.63□□□□□ -0.71
BRCA1-213ENST00000476777 CLEC4MQ9H2X3 399 aaPredicted RBP10.63□□□□□ -0.71
BRCA1-213ENST00000476777 RASSF1Q9NS23 344 aa10.63□□□□□ -0.71
BRCA1-213ENST00000476777 TMEM184CQ9NVA4 438 aa10.63□□□□□ -0.71
BRCA1-213ENST00000476777 NAALAD2Q9Y3Q0 740 aa10.63□□□□□ -0.71
BRCA1-213ENST00000476777 FEZF1A0PJY2 475 aa10.62□□□□□ -0.71
BRCA1-213ENST00000476777 ZNF860A6NHJ4 632 aa10.62□□□□□ -0.71
BRCA1-213ENST00000476777 CBFA2T2O43439 604 aa10.62□□□□□ -0.71
BRCA1-213ENST00000476777 FHP07954 510 aa10.62□□□□□ -0.71
BRCA1-213ENST00000476777 CHRM3P20309 590 aa10.62□□□□□ -0.71
BRCA1-213ENST00000476777 HRH2P25021 359 aa10.62□□□□□ -0.71
BRCA1-213ENST00000476777 ARNTP27540 789 aa10.62□□□□□ -0.71
BRCA1-213ENST00000476777 FDFT1P37268 417 aa10.62□□□□□ -0.71
BRCA1-213ENST00000476777 GPR85P60893 370 aa10.62□□□□□ -0.71
BRCA1-213ENST00000476777 SNTB1Q13884 538 aaKnown RBP10.62□□□□□ -0.71
BRCA1-213ENST00000476777 SKOR2Q2VWA4 1001 aaPredicted RBP10.62□□□□□ -0.71
BRCA1-213ENST00000476777 PCID2Q5JVF3 399 aa10.62□□□□□ -0.71
BRCA1-213ENST00000476777 THEMIS2Q5TEJ8 643 aa10.62□□□□□ -0.71
BRCA1-213ENST00000476777 MEI1Q5TIA1 1274 aa10.62□□□□□ -0.71
BRCA1-213ENST00000476777 ARSKQ6UWY0 536 aa10.62□□□□□ -0.71
BRCA1-213ENST00000476777 MDGA2Q7Z553 956 aa10.62□□□□□ -0.71
BRCA1-213ENST00000476777 CNGA4Q8IV77 575 aa10.62□□□□□ -0.71
BRCA1-213ENST00000476777 LIX1LQ8IVB5 337 aa10.62□□□□□ -0.71
BRCA1-213ENST00000476777 REXO1L1PQ8IX06 675 aa10.62□□□□□ -0.71
BRCA1-213ENST00000476777 CAMKVQ8NCB2 501 aa10.62□□□□□ -0.71
BRCA1-213ENST00000476777 FBXO15Q8NCQ5 510 aaPredicted RBP10.62□□□□□ -0.71
BRCA1-213ENST00000476777 SLC6A16Q9GZN6 736 aa10.62□□□□□ -0.71
BRCA1-213ENST00000476777 DEFB127Q9H1M4 99 aa10.62□□□□□ -0.71
BRCA1-213ENST00000476777 PNPLA3Q9NST1 481 aa10.62□□□□□ -0.71
BRCA1-213ENST00000476777 SLC22A7Q9Y694 548 aa10.62□□□□□ -0.71
BRCA1-213ENST00000476777 A0A0G2JNJ9 132 aa10.61□□□□□ -0.71
BRCA1-213ENST00000476777 TCRBV7S2A1N4TA0A589 114 aa10.61□□□□□ -0.71
BRCA1-213ENST00000476777 SAGE2PA6NJ88 616 aa10.61□□□□□ -0.71
BRCA1-213ENST00000476777 E7EVH7 732 aa10.61□□□□□ -0.71
BRCA1-213ENST00000476777 NPIPA2E9PIF3 369 aa10.61□□□□□ -0.71
BRCA1-213ENST00000476777 NPIPA3F8WFD2 350 aa10.61□□□□□ -0.71
BRCA1-213ENST00000476777 H3BMM5 538 aa10.61□□□□□ -0.71
BRCA1-213ENST00000476777 FCHO1O14526 889 aa10.61□□□□□ -0.71
BRCA1-213ENST00000476777 LCMT2O60294 686 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms