RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 ERVK-11Q9UQG0 969 aa15.83■□□□□ 0.13
TMEM53-208ENST00000476724 PCDHGB1Q9Y5G3 927 aa15.83■□□□□ 0.13
TMEM53-208ENST00000476724 C1orf226A1L170 272 aa15.83■□□□□ 0.12
TMEM53-208ENST00000476724 JRKO75564 520 aa15.83■□□□□ 0.12
TMEM53-208ENST00000476724 ITIH1P19827 911 aa15.83■□□□□ 0.12
TMEM53-208ENST00000476724 PDHA2P29803 388 aa15.83■□□□□ 0.12
TMEM53-208ENST00000476724 RPL3P39023 403 aaKnown RBP15.83■□□□□ 0.12
TMEM53-208ENST00000476724 STT3AP46977 705 aa15.83■□□□□ 0.12
TMEM53-208ENST00000476724 ELP6Q0PNE2 266 aa15.83■□□□□ 0.12
TMEM53-208ENST00000476724 NFATC3Q12968 1075 aa15.83■□□□□ 0.12
TMEM53-208ENST00000476724 ZNF234Q14588 700 aa15.83■□□□□ 0.12
TMEM53-208ENST00000476724 TEAD4Q15561 434 aa15.83■□□□□ 0.12
TMEM53-208ENST00000476724 FGD3Q5JSP0 725 aa15.83■□□□□ 0.12
TMEM53-208ENST00000476724 CYP4Z1Q86W10 505 aa15.83■□□□□ 0.12
TMEM53-208ENST00000476724 YAF2Q8IY57 180 aa15.83■□□□□ 0.12
TMEM53-208ENST00000476724 LILRA3Q8N6C8 439 aaPredicted RBP15.83■□□□□ 0.12
TMEM53-208ENST00000476724 OR10Q1Q8NGQ4 319 aa15.83■□□□□ 0.12
TMEM53-208ENST00000476724 NEIL2Q969S2 332 aa15.83■□□□□ 0.12
TMEM53-208ENST00000476724 ZNF514Q96K75 400 aaPredicted RBP15.83■□□□□ 0.12
TMEM53-208ENST00000476724 BHLHE41Q9C0J9 482 aaPredicted RBP15.83■□□□□ 0.12
TMEM53-208ENST00000476724 NAA50Q9GZZ1 169 aaKnown RBP15.83■□□□□ 0.12
TMEM53-208ENST00000476724 EHD1Q9H4M9 534 aa15.83■□□□□ 0.12
TMEM53-208ENST00000476724 ADPRHL2Q9NX46 363 aa15.83■□□□□ 0.12
TMEM53-208ENST00000476724 CLDND1Q9NY35 253 aa15.83■□□□□ 0.12
TMEM53-208ENST00000476724 VNN3Q9NY84 501 aa15.83■□□□□ 0.12
TMEM53-208ENST00000476724 ATP6V1HQ9UI12 483 aa15.83■□□□□ 0.12
TMEM53-208ENST00000476724 HCN2Q9UL51 889 aa15.83■□□□□ 0.12
TMEM53-208ENST00000476724 BTBD3Q9Y2F9 522 aa15.83■□□□□ 0.12
TMEM53-208ENST00000476724 DYRK1BQ9Y463 629 aa15.83■□□□□ 0.12
TMEM53-208ENST00000476724 NUP214P35658 2090 aaPredicted RBP15.82■□□□□ 0.12
TMEM53-208ENST00000476724 C17orf113A0A1B0GUU1 675 aa15.82■□□□□ 0.12
TMEM53-208ENST00000476724 MYO1GB0I1T2 1018 aa15.82■□□□□ 0.12
TMEM53-208ENST00000476724 KPNA3O00505 521 aaPredicted RBP15.82■□□□□ 0.12
TMEM53-208ENST00000476724 YY2O15391 372 aa15.82■□□□□ 0.12
TMEM53-208ENST00000476724 ETHE1O95571 254 aa15.82■□□□□ 0.12
TMEM53-208ENST00000476724 DAPP51397 102 aa15.82■□□□□ 0.12
TMEM53-208ENST00000476724 IL5RAQ01344 420 aa15.82■□□□□ 0.12
TMEM53-208ENST00000476724 RGNQ15493 299 aa15.82■□□□□ 0.12
TMEM53-208ENST00000476724 HIST2H2ACQ16777 129 aaPredicted RBP15.82■□□□□ 0.12
TMEM53-208ENST00000476724 HIST2H2AA3Q6FI13 130 aa15.82■□□□□ 0.12
TMEM53-208ENST00000476724 LAIR2Q6ISS4 152 aa15.82■□□□□ 0.12
TMEM53-208ENST00000476724 FAM81AQ8TBF8 368 aa15.82■□□□□ 0.12
TMEM53-208ENST00000476724 ZFP90Q8TF47 636 aa15.82■□□□□ 0.12
TMEM53-208ENST00000476724 ZNF480Q8WV37 535 aa15.82■□□□□ 0.12
TMEM53-208ENST00000476724 MUL1Q969V5 352 aa15.82■□□□□ 0.12
TMEM53-208ENST00000476724 HSH2DQ96JZ2 352 aa15.82■□□□□ 0.12
TMEM53-208ENST00000476724 APOL4Q9BPW4 351 aa15.82■□□□□ 0.12
TMEM53-208ENST00000476724 CHST8Q9H2A9 424 aa15.82■□□□□ 0.12
TMEM53-208ENST00000476724 REEP1Q9H902 201 aa15.82■□□□□ 0.12
TMEM53-208ENST00000476724 PRM3Q9NNZ6 103 aa15.82■□□□□ 0.12
TMEM53-208ENST00000476724 LTB4R2Q9NPC1 389 aa15.82■□□□□ 0.12
TMEM53-208ENST00000476724 ITM2CQ9NQX7 267 aa15.82■□□□□ 0.12
TMEM53-208ENST00000476724 ATAD3AQ9NVI7 634 aa15.82■□□□□ 0.12
TMEM53-208ENST00000476724 TPRKBQ9Y3C4 175 aa15.82■□□□□ 0.12
TMEM53-208ENST00000476724 LRRK1Q38SD2 2015 aa15.82■□□□□ 0.12
TMEM53-208ENST00000476724 GNG14A0A1W2PPG7 69 aa15.82■□□□□ 0.12
TMEM53-208ENST00000476724 TBC1D3BA6NDS4 549 aa15.82■□□□□ 0.12
TMEM53-208ENST00000476724 PCDH7O60245 1069 aa15.82■□□□□ 0.12
TMEM53-208ENST00000476724 HTR1AP08908 422 aa15.82■□□□□ 0.12
TMEM53-208ENST00000476724 AGXTP21549 392 aa15.82■□□□□ 0.12
TMEM53-208ENST00000476724 GDI1P31150 447 aa15.82■□□□□ 0.12
TMEM53-208ENST00000476724 LTBRP36941 435 aa15.82■□□□□ 0.12
TMEM53-208ENST00000476724 ENTPD1P49961 510 aa15.82■□□□□ 0.12
TMEM53-208ENST00000476724 PLA2G16P53816 162 aa15.82■□□□□ 0.12
TMEM53-208ENST00000476724 ITGA1P56199 1179 aa15.82■□□□□ 0.12
TMEM53-208ENST00000476724 RPS13P62277 151 aaKnown RBP15.82■□□□□ 0.12
TMEM53-208ENST00000476724 RAPSNQ13702 412 aa15.82■□□□□ 0.12
TMEM53-208ENST00000476724 HKDC1Q2TB90 917 aa15.82■□□□□ 0.12
TMEM53-208ENST00000476724 ZNF829Q3KNS6 432 aaPredicted RBP15.82■□□□□ 0.12
TMEM53-208ENST00000476724 C9orf64Q5T6V5 341 aa15.82■□□□□ 0.12
TMEM53-208ENST00000476724 CEP68Q76N32 757 aa15.82■□□□□ 0.12
TMEM53-208ENST00000476724 LAS2Q8IYD9 372 aa15.82■□□□□ 0.12
TMEM53-208ENST00000476724 SYTL1Q8IYJ3 562 aa15.82■□□□□ 0.12
TMEM53-208ENST00000476724 TMIEQ8NEW7 156 aa15.82■□□□□ 0.12
TMEM53-208ENST00000476724 GOT1L1Q8NHS2 421 aaPredicted RBP15.82■□□□□ 0.12
TMEM53-208ENST00000476724 ITM2BQ9Y287 266 aa15.82■□□□□ 0.12
TMEM53-208ENST00000476724 KLHL33A6NCF5 533 aa15.81■□□□□ 0.12
TMEM53-208ENST00000476724 MRPS14O60783 128 aaKnown RBP15.81■□□□□ 0.12
TMEM53-208ENST00000476724 ANGPTL1O95841 491 aa15.81■□□□□ 0.12
TMEM53-208ENST00000476724 C1GALT1C1LP0DN25 315 aa15.81■□□□□ 0.12
TMEM53-208ENST00000476724 NPPBP16860 134 aa15.81■□□□□ 0.12
TMEM53-208ENST00000476724 JUNDP17535 347 aa15.81■□□□□ 0.12
TMEM53-208ENST00000476724 ITGB7P26010 798 aa15.81■□□□□ 0.12
TMEM53-208ENST00000476724 PBLDP30039 288 aaPredicted RBP15.81■□□□□ 0.12
TMEM53-208ENST00000476724 PCGF2P35227 344 aa15.81■□□□□ 0.12
TMEM53-208ENST00000476724 SOX9P48436 509 aa15.81■□□□□ 0.12
TMEM53-208ENST00000476724 VLDLRP98155 873 aa15.81■□□□□ 0.12
TMEM53-208ENST00000476724 ZNF763Q0D2J5 394 aa15.81■□□□□ 0.12
TMEM53-208ENST00000476724 MOGQ16653 247 aa15.81■□□□□ 0.12
TMEM53-208ENST00000476724 HNRNPA1L2Q32P51 320 aaKnown RBP15.81■□□□□ 0.12
TMEM53-208ENST00000476724 ANKRD26P1Q6NSI1 321 aa15.81■□□□□ 0.12
TMEM53-208ENST00000476724 TMPRSS11BQ86T26 416 aa15.81■□□□□ 0.12
TMEM53-208ENST00000476724 CFAP206Q8IYR0 622 aa15.81■□□□□ 0.12
TMEM53-208ENST00000476724 BPIFB6Q8NFQ5 453 aa15.81■□□□□ 0.12
TMEM53-208ENST00000476724 OR9A1PQ8NGU1 263 aa15.81■□□□□ 0.12
TMEM53-208ENST00000476724 TBC1D15Q8TC07 691 aa15.81■□□□□ 0.12
TMEM53-208ENST00000476724 FOXJ1Q92949 421 aa15.81■□□□□ 0.12
TMEM53-208ENST00000476724 ELSPBP1Q96BH3 223 aa15.81■□□□□ 0.12
TMEM53-208ENST00000476724 LINC00615Q96LM1 132 aaPredicted RBP15.81■□□□□ 0.12
TMEM53-208ENST00000476724 WRAP53Q9BUR4 548 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms