RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 AGKQ53H12 422 aa17.3■□□□□ 0.36
ATG4B-217ENST00000475693 OR4N4Q8N0Y3 316 aa17.3■□□□□ 0.36
ATG4B-217ENST00000475693 GALNT15Q8N3T1 639 aa17.3■□□□□ 0.36
ATG4B-217ENST00000475693 GFM2Q969S9 779 aaKnown RBP17.3■□□□□ 0.36
ATG4B-217ENST00000475693 PAPOLBQ9NRJ5 636 aaKnown RBP17.3■□□□□ 0.36
ATG4B-217ENST00000475693 TMEM184CQ9NVA4 438 aa17.3■□□□□ 0.36
ATG4B-217ENST00000475693 NLGN3Q9NZ94 848 aa17.3■□□□□ 0.36
ATG4B-217ENST00000475693 GPR45Q9Y5Y3 372 aa17.3■□□□□ 0.36
ATG4B-217ENST00000475693 ANKDD1BA6NHY2 528 aa17.29■□□□□ 0.36
ATG4B-217ENST00000475693 CAPN5O15484 640 aaPredicted RBP17.29■□□□□ 0.36
ATG4B-217ENST00000475693 GPX3P22352 226 aa17.29■□□□□ 0.36
ATG4B-217ENST00000475693 IL12AP29459 219 aa17.29■□□□□ 0.36
ATG4B-217ENST00000475693 HOXD12P35452 270 aa17.29■□□□□ 0.36
ATG4B-217ENST00000475693 SESN3P58005 492 aa17.29■□□□□ 0.36
ATG4B-217ENST00000475693 TBL3Q12788 808 aaKnown RBP17.29■□□□□ 0.36
ATG4B-217ENST00000475693 SNAP47Q5SQN1 464 aa17.29■□□□□ 0.36
ATG4B-217ENST00000475693 PERM1Q5SV97 790 aa17.29■□□□□ 0.36
ATG4B-217ENST00000475693 FRMPD2BQ6IN97 320 aa17.29■□□□□ 0.36
ATG4B-217ENST00000475693 PAQR7Q86WK9 346 aa17.29■□□□□ 0.36
ATG4B-217ENST00000475693 FUNDC1Q8IVP5 155 aa17.29■□□□□ 0.36
ATG4B-217ENST00000475693 SDR16C5Q8N3Y7 309 aa17.29■□□□□ 0.36
ATG4B-217ENST00000475693 LIX1Q8N485 282 aa17.29■□□□□ 0.36
ATG4B-217ENST00000475693 KRTCAP2Q8N6L1 136 aa17.29■□□□□ 0.36
ATG4B-217ENST00000475693 C1orf52Q8N6N3 182 aaKnown RBP17.29■□□□□ 0.36
ATG4B-217ENST00000475693 PRSS33Q8NF86 280 aa17.29■□□□□ 0.36
ATG4B-217ENST00000475693 OR4C6Q8NH72 309 aa17.29■□□□□ 0.36
ATG4B-217ENST00000475693 ATOH1Q92858 354 aaPredicted RBP17.29■□□□□ 0.36
ATG4B-217ENST00000475693 CCDC74AQ96AQ1 378 aa17.29■□□□□ 0.36
ATG4B-217ENST00000475693 ACTL8Q9H568 366 aa17.29■□□□□ 0.36
ATG4B-217ENST00000475693 TAGLN3Q9UI15 199 aa17.29■□□□□ 0.36
ATG4B-217ENST00000475693 RALGAPA1Q6GYQ0 2036 aa17.29■□□□□ 0.36
ATG4B-217ENST00000475693 SLC9B1P1A6NJY1 282 aa17.29■□□□□ 0.36
ATG4B-217ENST00000475693 ENO4A6NNW6 628 aa17.29■□□□□ 0.36
ATG4B-217ENST00000475693 B2RBV5 119 aa17.29■□□□□ 0.36
ATG4B-217ENST00000475693 C4orf51C9J302 202 aa17.29■□□□□ 0.36
ATG4B-217ENST00000475693 ZW10O43264 779 aa17.29■□□□□ 0.36
ATG4B-217ENST00000475693 LRATO95237 230 aa17.29■□□□□ 0.36
ATG4B-217ENST00000475693 C9P02748 559 aa17.29■□□□□ 0.36
ATG4B-217ENST00000475693 CCT8P50990 548 aa17.29■□□□□ 0.36
ATG4B-217ENST00000475693 ACTR3P61158 418 aa17.29■□□□□ 0.36
ATG4B-217ENST00000475693 ABATP80404 500 aa17.29■□□□□ 0.36
ATG4B-217ENST00000475693 LAPTM5Q13571 262 aa17.29■□□□□ 0.36
ATG4B-217ENST00000475693 ARMC6Q6NXE6 501 aa17.29■□□□□ 0.36
ATG4B-217ENST00000475693 SHISA5Q8N114 240 aa17.29■□□□□ 0.36
ATG4B-217ENST00000475693 CPSF7Q8N684 471 aaKnown RBP17.29■□□□□ 0.36
ATG4B-217ENST00000475693 AMER3Q8N944 861 aa17.29■□□□□ 0.36
ATG4B-217ENST00000475693 SLC22A18Q96BI1 424 aa17.29■□□□□ 0.36
ATG4B-217ENST00000475693 RNF31Q96EP0 1072 aa17.29■□□□□ 0.36
ATG4B-217ENST00000475693 PPP3R2Q96LZ3 170 aa17.29■□□□□ 0.36
ATG4B-217ENST00000475693 STARD5Q9NSY2 213 aa17.29■□□□□ 0.36
ATG4B-217ENST00000475693 AIG1Q9NVV5 245 aa17.29■□□□□ 0.36
ATG4B-217ENST00000475693 RAB23Q9ULC3 237 aa17.29■□□□□ 0.36
ATG4B-217ENST00000475693 PSMD12O00232 456 aaPredicted RBP17.28■□□□□ 0.36
ATG4B-217ENST00000475693 KHNYNO15037 678 aaKnown RBP17.28■□□□□ 0.36
ATG4B-217ENST00000475693 VPS4BO75351 444 aa17.28■□□□□ 0.36
ATG4B-217ENST00000475693 BCKDHAP12694 445 aa17.28■□□□□ 0.36
ATG4B-217ENST00000475693 CAPZBP47756 277 aa17.28■□□□□ 0.36
ATG4B-217ENST00000475693 RAE1P78406 368 aaKnown RBP17.28■□□□□ 0.36
ATG4B-217ENST00000475693 EMX2Q04743 252 aa17.28■□□□□ 0.36
ATG4B-217ENST00000475693 RPS6KA2Q15349 733 aa17.28■□□□□ 0.36
ATG4B-217ENST00000475693 SNX32Q86XE0 403 aa17.28■□□□□ 0.36
ATG4B-217ENST00000475693 SCUBE1Q8IWY4 988 aa17.28■□□□□ 0.36
ATG4B-217ENST00000475693 RBM12BQ8IXT5 1001 aaKnown RBP17.28■□□□□ 0.36
ATG4B-217ENST00000475693 CDC26Q8NHZ8 85 aa17.28■□□□□ 0.36
ATG4B-217ENST00000475693 CREB3L4Q8TEY5 395 aa17.28■□□□□ 0.36
ATG4B-217ENST00000475693 TSSK3Q96PN8 268 aa17.28■□□□□ 0.36
ATG4B-217ENST00000475693 CCT7Q99832 543 aa17.28■□□□□ 0.36
ATG4B-217ENST00000475693 POMT2Q9UKY4 750 aa17.28■□□□□ 0.36
ATG4B-217ENST00000475693 ATXN7L1Q9ULK2 861 aaPredicted RBP17.28■□□□□ 0.36
ATG4B-217ENST00000475693 SCN3AQ9NY46 2000 aa17.28■□□□□ 0.36
ATG4B-217ENST00000475693 MUC6Q6W4X9 2439 aa17.28■□□□□ 0.36
ATG4B-217ENST00000475693 IGHV1OR21-1A0A087WYE8 117 aa17.28■□□□□ 0.36
ATG4B-217ENST00000475693 A8MU76 341 aa17.28■□□□□ 0.36
ATG4B-217ENST00000475693 CIB2O75838 187 aa17.28■□□□□ 0.36
ATG4B-217ENST00000475693 GLB1P16278 677 aa17.28■□□□□ 0.36
ATG4B-217ENST00000475693 CDH3P22223 829 aa17.28■□□□□ 0.36
ATG4B-217ENST00000475693 AP2B1P63010 937 aa17.28■□□□□ 0.36
ATG4B-217ENST00000475693 PLA2G2CQ5R387 149 aa17.28■□□□□ 0.36
ATG4B-217ENST00000475693 OGFOD2Q6N063 350 aa17.28■□□□□ 0.36
ATG4B-217ENST00000475693 ZCCHC8Q6NZY4 707 aaKnown RBP17.28■□□□□ 0.36
ATG4B-217ENST00000475693 CYP20A1Q6UW02 462 aa17.28■□□□□ 0.36
ATG4B-217ENST00000475693 TMPRSS9Q7Z410 1059 aa17.28■□□□□ 0.36
ATG4B-217ENST00000475693 ZFAND4Q86XD8 727 aa17.28■□□□□ 0.36
ATG4B-217ENST00000475693 AVL9Q8NBF6 648 aa17.28■□□□□ 0.36
ATG4B-217ENST00000475693 SUMF1Q8NBK3 374 aa17.28■□□□□ 0.36
ATG4B-217ENST00000475693 SNX7Q9UNH6 387 aa17.28■□□□□ 0.36
ATG4B-217ENST00000475693 ASCC3Q8N3C0 2202 aaKnown RBP17.27■□□□□ 0.36
ATG4B-217ENST00000475693 OR2A25A4D2G3 310 aa17.27■□□□□ 0.36
ATG4B-217ENST00000475693 NDUFS4O43181 175 aa17.27■□□□□ 0.36
ATG4B-217ENST00000475693 NUDT21O43809 227 aaKnown RBP17.27■□□□□ 0.36
ATG4B-217ENST00000475693 FKBP6O75344 327 aa17.27■□□□□ 0.36
ATG4B-217ENST00000475693 EIF2S1P05198 315 aaKnown RBP17.27■□□□□ 0.36
ATG4B-217ENST00000475693 SYPP08247 313 aa17.27■□□□□ 0.36
ATG4B-217ENST00000475693 CSF2RBP32927 897 aa17.27■□□□□ 0.36
ATG4B-217ENST00000475693 PLA2G16P53816 162 aa17.27■□□□□ 0.36
ATG4B-217ENST00000475693 ATXN3P54252 364 aaPredicted RBP17.27■□□□□ 0.36
ATG4B-217ENST00000475693 SPEM2Q0P670 501 aa17.27■□□□□ 0.36
ATG4B-217ENST00000475693 HYAL2Q12891 473 aa17.27■□□□□ 0.36
ATG4B-217ENST00000475693 CSTF3Q12996 717 aaKnown RBP17.27■□□□□ 0.36
ATG4B-217ENST00000475693 NOXRED1Q6NXP6 359 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms