RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 CUL3Q13618 768 aa6.74□□□□□ -1.33
SHQ1-207ENST00000475558 GRB7Q14451 532 aa6.74□□□□□ -1.33
SHQ1-207ENST00000475558 PLCL1Q15111 1095 aa6.74□□□□□ -1.33
SHQ1-207ENST00000475558 PDCD2Q16342 344 aaPredicted RBP6.74□□□□□ -1.33
SHQ1-207ENST00000475558 CPSF6Q16630 551 aaKnown RBP eCLIP6.74□□□□□ -1.33
SHQ1-207ENST00000475558 AP5B1Q2VPB7 878 aa6.74□□□□□ -1.33
SHQ1-207ENST00000475558 GALNTL6Q49A17 601 aa6.74□□□□□ -1.33
SHQ1-207ENST00000475558 SLC9B1Q4ZJI4 515 aa6.74□□□□□ -1.33
SHQ1-207ENST00000475558 SPIN4Q56A73 249 aa6.74□□□□□ -1.33
SHQ1-207ENST00000475558 COQ5Q5HYK3 327 aa6.74□□□□□ -1.33
SHQ1-207ENST00000475558 C6orf136Q5SQH8 315 aa6.74□□□□□ -1.33
SHQ1-207ENST00000475558 ARHGAP40Q5TG30 622 aa6.74□□□□□ -1.33
SHQ1-207ENST00000475558 CES4AQ5XG92 561 aa6.74□□□□□ -1.33
SHQ1-207ENST00000475558 ICE2Q659A1 982 aa6.74□□□□□ -1.33
SHQ1-207ENST00000475558 LETMD1Q6P1Q0 360 aa6.74□□□□□ -1.33
SHQ1-207ENST00000475558 XKR5Q6UX68 686 aa6.74□□□□□ -1.33
SHQ1-207ENST00000475558 KANSL1Q7Z3B3 1105 aa6.74□□□□□ -1.33
SHQ1-207ENST00000475558 MYLK4Q86YV6 388 aaPredicted RBP6.74□□□□□ -1.33
SHQ1-207ENST00000475558 MIER2Q8N344 545 aa6.74□□□□□ -1.33
SHQ1-207ENST00000475558 FITM2Q8N6M3 262 aa6.74□□□□□ -1.33
SHQ1-207ENST00000475558 FAM181AQ8N9Y4 354 aa6.74□□□□□ -1.33
SHQ1-207ENST00000475558 PCYOX1LQ8NBM8 494 aa6.74□□□□□ -1.33
SHQ1-207ENST00000475558 OR7G3Q8NG95 312 aa6.74□□□□□ -1.33
SHQ1-207ENST00000475558 OR4E2Q8NGC2 313 aa6.74□□□□□ -1.33
SHQ1-207ENST00000475558 OR52B6Q8NGF0 335 aa6.74□□□□□ -1.33
SHQ1-207ENST00000475558 NAT14Q8WUY8 206 aa6.74□□□□□ -1.33
SHQ1-207ENST00000475558 PYCR2Q96C36 320 aa6.74□□□□□ -1.33
SHQ1-207ENST00000475558 PDXPQ96GD0 296 aa6.74□□□□□ -1.33
SHQ1-207ENST00000475558 ZDHHC12Q96GR4 267 aa6.74□□□□□ -1.33
SHQ1-207ENST00000475558 NAF1Q96HR8 494 aaKnown RBP6.74□□□□□ -1.33
SHQ1-207ENST00000475558 NSUN5Q96P11 429 aaKnown RBP6.74□□□□□ -1.33
SHQ1-207ENST00000475558 CD180Q99467 661 aa6.74□□□□□ -1.33
SHQ1-207ENST00000475558 ZBTB18Q99592 522 aa6.74□□□□□ -1.33
SHQ1-207ENST00000475558 SLC38A3Q99624 504 aa6.74□□□□□ -1.33
SHQ1-207ENST00000475558 MENTQ9BUN1 341 aa6.74□□□□□ -1.33
SHQ1-207ENST00000475558 MRPL1Q9BYD6 325 aaKnown RBP6.74□□□□□ -1.33
SHQ1-207ENST00000475558 DPH1Q9BZG8 443 aa6.74□□□□□ -1.33
SHQ1-207ENST00000475558 SHCBP1LQ9BZQ2 653 aa6.74□□□□□ -1.33
SHQ1-207ENST00000475558 ROGDIQ9GZN7 287 aa6.74□□□□□ -1.33
SHQ1-207ENST00000475558 CLK4Q9HAZ1 481 aaKnown RBP6.74□□□□□ -1.33
SHQ1-207ENST00000475558 LRTM1Q9HBL6 345 aa6.74□□□□□ -1.33
SHQ1-207ENST00000475558 ABCF3Q9NUQ8 709 aa6.74□□□□□ -1.33
SHQ1-207ENST00000475558 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.74□□□□□ -1.33
SHQ1-207ENST00000475558 HRASLS2Q9NWW9 162 aa6.74□□□□□ -1.33
SHQ1-207ENST00000475558 NOP53Q9NZM5 478 aaKnown RBP6.74□□□□□ -1.33
SHQ1-207ENST00000475558 ZIM2Q9NZV7 527 aa6.74□□□□□ -1.33
SHQ1-207ENST00000475558 TAGLN3Q9UI15 199 aa6.74□□□□□ -1.33
SHQ1-207ENST00000475558 ZNF225Q9UK10 706 aa6.74□□□□□ -1.33
SHQ1-207ENST00000475558 RUVBL1Q9Y265 456 aaKnown RBP6.74□□□□□ -1.33
SHQ1-207ENST00000475558 CA5BQ9Y2D0 317 aa6.74□□□□□ -1.33
SHQ1-207ENST00000475558 AP3M1Q9Y2T2 418 aa6.74□□□□□ -1.33
SHQ1-207ENST00000475558 RNF11Q9Y3C5 154 aa6.74□□□□□ -1.33
SHQ1-207ENST00000475558 PLEKHM1Q9Y4G2 1056 aa6.74□□□□□ -1.33
SHQ1-207ENST00000475558 CAPN7Q9Y6W3 813 aa6.74□□□□□ -1.33
SHQ1-207ENST00000475558 ATMQ13315 3056 aa6.74□□□□□ -1.33
SHQ1-207ENST00000475558 HECTD1Q9ULT8 2610 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 A0A088AWK7 358 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 CFAP73A6NFT4 308 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 OR52A4PA6NMU1 304 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 CYSRT1A8MQ03 144 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 RHPN2P1A8MT19 583 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 BBIP1A8MTZ0 92 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 PSMD12O00232 456 aaPredicted RBP6.73□□□□□ -1.33
SHQ1-207ENST00000475558 PPP6CO00743 305 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 PIP5K1BO14986 540 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 TOX3O15405 576 aaPredicted RBP6.73□□□□□ -1.33
SHQ1-207ENST00000475558 KLK10O43240 276 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 SIGLEC6O43699 453 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 PIAS2O75928 621 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 UNC5CO95185 931 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 WISP1O95388 367 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 KRT16P08779 473 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 CHRM5P08912 532 aaPredicted RBP6.73□□□□□ -1.33
SHQ1-207ENST00000475558 LINC00032P0C843 101 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 PRR35P0CG20 571 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 GLB1P16278 677 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 TSPAN8P19075 237 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 PRPS1L1P21108 318 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 ZNF10P21506 573 aaPredicted RBP6.73□□□□□ -1.33
SHQ1-207ENST00000475558 PTPN4P29074 926 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 ARRB2P32121 409 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 LSSP48449 732 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 CLNS1AP54105 237 aaKnown RBP6.73□□□□□ -1.33
SHQ1-207ENST00000475558 STXBP1P61764 594 aaKnown RBP6.73□□□□□ -1.33
SHQ1-207ENST00000475558 TRA2BP62995 288 aaKnown RBP6.73□□□□□ -1.33
SHQ1-207ENST00000475558 SKP1P63208 163 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 DAB2P98082 770 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 VAC14Q08AM6 782 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 PWP1Q13610 501 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 CYLC2Q14093 348 aaPredicted RBP6.73□□□□□ -1.33
SHQ1-207ENST00000475558 DPY19L1Q2PZI1 675 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 SPATS1Q496A3 300 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 GLIPR1L2Q4G1C9 344 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 DNAL1Q4LDG9 190 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 C14orf28Q4W4Y0 310 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 PDCD4Q53EL6 469 aaKnown RBP6.73□□□□□ -1.33
SHQ1-207ENST00000475558 XKR7Q5GH72 579 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 ZC3H12BQ5HYM0 836 aaKnown RBP6.73□□□□□ -1.33
SHQ1-207ENST00000475558 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.73□□□□□ -1.33
SHQ1-207ENST00000475558 CLEC6AQ6EIG7 209 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms