RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 AKAP10O43572 662 aa13.13□□□□□ -0.31
TRAF4-210ENST00000475329 LRATO95237 230 aa13.13□□□□□ -0.31
TRAF4-210ENST00000475329 TBX6O95947 436 aaPredicted RBP13.13□□□□□ -0.31
TRAF4-210ENST00000475329 SERPIND1P05546 499 aa13.13□□□□□ -0.31
TRAF4-210ENST00000475329 PGRP06401 933 aa13.13□□□□□ -0.31
TRAF4-210ENST00000475329 COX7A2P14406 83 aa13.13□□□□□ -0.31
TRAF4-210ENST00000475329 DPP6P42658 865 aa13.13□□□□□ -0.31
TRAF4-210ENST00000475329 ARRB1P49407 418 aaPredicted RBP13.13□□□□□ -0.31
TRAF4-210ENST00000475329 SRSF11Q05519 484 aaKnown RBP13.13□□□□□ -0.31
TRAF4-210ENST00000475329 CYP4F3Q08477 520 aa13.13□□□□□ -0.31
TRAF4-210ENST00000475329 RIPK1Q13546 671 aa13.13□□□□□ -0.31
TRAF4-210ENST00000475329 ZIC1Q15915 447 aa13.13□□□□□ -0.31
TRAF4-210ENST00000475329 HKDC1Q2TB90 917 aa13.13□□□□□ -0.31
TRAF4-210ENST00000475329 PGS1Q32NB8 556 aa13.13□□□□□ -0.31
TRAF4-210ENST00000475329 C14orf28Q4W4Y0 310 aa13.13□□□□□ -0.31
TRAF4-210ENST00000475329 PIGGQ5H8A4 983 aa13.13□□□□□ -0.31
TRAF4-210ENST00000475329 C1orf146Q5VVC0 180 aa13.13□□□□□ -0.31
TRAF4-210ENST00000475329 FBXW10Q5XX13 1052 aa13.13□□□□□ -0.31
TRAF4-210ENST00000475329 OGFOD3Q6PK18 319 aa13.13□□□□□ -0.31
TRAF4-210ENST00000475329 FIGLAQ6QHK4 219 aa13.13□□□□□ -0.31
TRAF4-210ENST00000475329 PRR23BQ6ZRT6 265 aa13.13□□□□□ -0.31
TRAF4-210ENST00000475329 ARPINQ7Z6K5 226 aa13.13□□□□□ -0.31
TRAF4-210ENST00000475329 C17orf82Q86X59 251 aaPredicted RBP13.13□□□□□ -0.31
TRAF4-210ENST00000475329 CREB3L4Q8TEY5 395 aa13.13□□□□□ -0.31
TRAF4-210ENST00000475329 RSC1A1Q92681 617 aa13.13□□□□□ -0.31
TRAF4-210ENST00000475329 RGMAQ96B86 450 aa13.13□□□□□ -0.31
TRAF4-210ENST00000475329 CCDC124Q96CT7 223 aaKnown RBP13.13□□□□□ -0.31
TRAF4-210ENST00000475329 QRFPRQ96P65 431 aa13.13□□□□□ -0.31
TRAF4-210ENST00000475329 OR52E6Q96RD3 313 aa13.13□□□□□ -0.31
TRAF4-210ENST00000475329 F2RL3Q96RI0 385 aa13.13□□□□□ -0.31
TRAF4-210ENST00000475329 GPATCH1Q9BRR8 931 aaKnown RBP13.13□□□□□ -0.31
TRAF4-210ENST00000475329 DENND2DQ9H6A0 471 aaPredicted RBP13.13□□□□□ -0.31
TRAF4-210ENST00000475329 RMND5AQ9H871 391 aa13.13□□□□□ -0.31
TRAF4-210ENST00000475329 MYNNQ9NPC7 610 aa13.13□□□□□ -0.31
TRAF4-210ENST00000475329 UCKL1Q9NWZ5 548 aa13.13□□□□□ -0.31
TRAF4-210ENST00000475329 KLK4Q9Y5K2 254 aa13.13□□□□□ -0.31
TRAF4-210ENST00000475329 KNL1Q8NG31 2342 aa13.12□□□□□ -0.31
TRAF4-210ENST00000475329 ARHGAP10A1A4S6 786 aa13.12□□□□□ -0.31
TRAF4-210ENST00000475329 PPM1DO15297 605 aa13.12□□□□□ -0.31
TRAF4-210ENST00000475329 HRO43593 1189 aa13.12□□□□□ -0.31
TRAF4-210ENST00000475329 UBXN7O94888 489 aa13.12□□□□□ -0.31
TRAF4-210ENST00000475329 KCNH1O95259 989 aa13.12□□□□□ -0.31
TRAF4-210ENST00000475329 KLK1P06870 262 aa13.12□□□□□ -0.31
TRAF4-210ENST00000475329 TYRP1P17643 537 aa13.12□□□□□ -0.31
TRAF4-210ENST00000475329 MAGP20916 626 aa13.12□□□□□ -0.31
TRAF4-210ENST00000475329 ME2P23368 584 aa13.12□□□□□ -0.31
TRAF4-210ENST00000475329 HNRNPH1P31943 449 aaKnown RBP13.12□□□□□ -0.31
TRAF4-210ENST00000475329 CNR2P34972 360 aa13.12□□□□□ -0.31
TRAF4-210ENST00000475329 RPL3P39023 403 aaKnown RBP13.12□□□□□ -0.31
TRAF4-210ENST00000475329 KIR3DL1P43629 444 aa13.12□□□□□ -0.31
TRAF4-210ENST00000475329 RXRGP48443 463 aa13.12□□□□□ -0.31
TRAF4-210ENST00000475329 SLC7A2P52569 658 aa13.12□□□□□ -0.31
TRAF4-210ENST00000475329 PWP1Q13610 501 aa13.12□□□□□ -0.31
TRAF4-210ENST00000475329 SIM2Q14190 667 aaPredicted RBP13.12□□□□□ -0.31
TRAF4-210ENST00000475329 CAPRIN1Q14444 709 aaKnown RBP13.12□□□□□ -0.31
TRAF4-210ENST00000475329 KPNB1Q14974 876 aaKnown RBP13.12□□□□□ -0.31
TRAF4-210ENST00000475329 MAPKAPK3Q16644 382 aa13.12□□□□□ -0.31
TRAF4-210ENST00000475329 UGT8Q16880 541 aa13.12□□□□□ -0.31
TRAF4-210ENST00000475329 TOR1AIP1Q5JTV8 583 aa13.12□□□□□ -0.31
TRAF4-210ENST00000475329 SAMD4BQ5PRF9 694 aaKnown RBP13.12□□□□□ -0.31
TRAF4-210ENST00000475329 C6orf132Q5T0Z8 1188 aa13.12□□□□□ -0.31
TRAF4-210ENST00000475329 PEAR1Q5VY43 1037 aaPredicted RBP13.12□□□□□ -0.31
TRAF4-210ENST00000475329 RIPOR1Q6ZS17 1223 aa13.12□□□□□ -0.31
TRAF4-210ENST00000475329 IKBIPQ70UQ0 350 aa13.12□□□□□ -0.31
TRAF4-210ENST00000475329 NUDT13Q86X67 352 aa13.12□□□□□ -0.31
TRAF4-210ENST00000475329 HPS6Q86YV9 775 aa13.12□□□□□ -0.31
TRAF4-210ENST00000475329 EFCAB3Q8N7B9 438 aa13.12□□□□□ -0.31
TRAF4-210ENST00000475329 DNAJB8Q8NHS0 232 aa13.12□□□□□ -0.31
TRAF4-210ENST00000475329 C16orf78Q8WTQ4 265 aa13.12□□□□□ -0.31
TRAF4-210ENST00000475329 NUDT8Q8WV74 236 aa13.12□□□□□ -0.31
TRAF4-210ENST00000475329 PIGKQ92643 395 aa13.12□□□□□ -0.31
TRAF4-210ENST00000475329 NELL1Q92832 810 aa13.12□□□□□ -0.31
TRAF4-210ENST00000475329 GFM2Q969S9 779 aaKnown RBP13.12□□□□□ -0.31
TRAF4-210ENST00000475329 ZUFSPQ96AP4 578 aa13.12□□□□□ -0.31
TRAF4-210ENST00000475329 THAP11Q96EK4 314 aa13.12□□□□□ -0.31
TRAF4-210ENST00000475329 ITCHQ96J02 903 aa13.12□□□□□ -0.31
TRAF4-210ENST00000475329 ZC3H10Q96K80 434 aaKnown RBP13.12□□□□□ -0.31
TRAF4-210ENST00000475329 ELF4Q99607 663 aaPredicted RBP13.12□□□□□ -0.31
TRAF4-210ENST00000475329 SLC38A3Q99624 504 aa13.12□□□□□ -0.31
TRAF4-210ENST00000475329 PRPF18Q99633 342 aaKnown RBP13.12□□□□□ -0.31
TRAF4-210ENST00000475329 SLC39A3Q9BRY0 314 aa13.12□□□□□ -0.31
TRAF4-210ENST00000475329 TMEM181Q9P2C4 612 aa13.12□□□□□ -0.31
TRAF4-210ENST00000475329 ABCD2Q9UBJ2 740 aa13.12□□□□□ -0.31
TRAF4-210ENST00000475329 ADAM29Q9UKF5 820 aa13.12□□□□□ -0.31
TRAF4-210ENST00000475329 POMT2Q9UKY4 750 aa13.12□□□□□ -0.31
TRAF4-210ENST00000475329 HCN4Q9Y3Q4 1203 aa13.12□□□□□ -0.31
TRAF4-210ENST00000475329 NCOR1O75376 2440 aa13.12□□□□□ -0.31
TRAF4-210ENST00000475329 LRIT2A6NDA9 550 aa13.11□□□□□ -0.31
TRAF4-210ENST00000475329 CAPN5O15484 640 aaPredicted RBP13.11□□□□□ -0.31
TRAF4-210ENST00000475329 ATP6V1G2O95670 118 aa13.11□□□□□ -0.31
TRAF4-210ENST00000475329 PROS1P07225 676 aa13.11□□□□□ -0.31
TRAF4-210ENST00000475329 HOXB3P14651 431 aaPredicted RBP13.11□□□□□ -0.31
TRAF4-210ENST00000475329 TPP2P29144 1249 aaPredicted RBP13.11□□□□□ -0.31
TRAF4-210ENST00000475329 HOXD12P35452 270 aa13.11□□□□□ -0.31
TRAF4-210ENST00000475329 BSGP35613 385 aa13.11□□□□□ -0.31
TRAF4-210ENST00000475329 GSTM5P46439 218 aa13.11□□□□□ -0.31
TRAF4-210ENST00000475329 CAPZBP47756 277 aa13.11□□□□□ -0.31
TRAF4-210ENST00000475329 ARFIP1P53367 373 aa13.11□□□□□ -0.31
TRAF4-210ENST00000475329 BNC1Q01954 994 aa13.11□□□□□ -0.31
TRAF4-210ENST00000475329 RELAQ04206 551 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms