RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 PIWIL4Q7Z3Z4 852 aaKnown RBP13.16□□□□□ -0.3
CCDC78-209ENST00000474647 ASPGQ86U10 573 aa13.16□□□□□ -0.3
CCDC78-209ENST00000474647 PDSS2Q86YH6 399 aa13.16□□□□□ -0.3
CCDC78-209ENST00000474647 SIAH3Q8IW03 269 aa13.16□□□□□ -0.3
CCDC78-209ENST00000474647 CPSF7Q8N684 471 aaKnown RBP13.16□□□□□ -0.3
CCDC78-209ENST00000474647 CAMKVQ8NCB2 501 aa13.16□□□□□ -0.3
CCDC78-209ENST00000474647 ASB11Q8WXH4 323 aa13.16□□□□□ -0.3
CCDC78-209ENST00000474647 ZNF669Q96BR6 464 aaPredicted RBP13.16□□□□□ -0.3
CCDC78-209ENST00000474647 CCDC138Q96M89 665 aa13.16□□□□□ -0.3
CCDC78-209ENST00000474647 GPR21Q99679 349 aa13.16□□□□□ -0.3
CCDC78-209ENST00000474647 TRIM51Q9BSJ1 452 aa13.16□□□□□ -0.3
CCDC78-209ENST00000474647 COQ3Q9NZJ6 369 aa13.16□□□□□ -0.3
CCDC78-209ENST00000474647 SAMD15Q9P1V8 674 aa13.16□□□□□ -0.3
CCDC78-209ENST00000474647 GUCA1BQ9UMX6 200 aa13.16□□□□□ -0.3
CCDC78-209ENST00000474647 NAALAD2Q9Y3Q0 740 aa13.16□□□□□ -0.3
CCDC78-209ENST00000474647 NEU2Q9Y3R4 380 aa13.16□□□□□ -0.3
CCDC78-209ENST00000474647 NEURL1O76050 574 aa13.15□□□□□ -0.3
CCDC78-209ENST00000474647 SLC35G6P0C7Q6 338 aa13.15□□□□□ -0.3
CCDC78-209ENST00000474647 HRH2P25021 359 aa13.15□□□□□ -0.3
CCDC78-209ENST00000474647 TPP2P29144 1249 aaPredicted RBP13.15□□□□□ -0.3
CCDC78-209ENST00000474647 SKIV2L2P42285 1042 aaKnown RBP13.15□□□□□ -0.3
CCDC78-209ENST00000474647 KCNJ1P48048 391 aa13.15□□□□□ -0.3
CCDC78-209ENST00000474647 VPS41P49754 854 aa13.15□□□□□ -0.3
CCDC78-209ENST00000474647 SLC26A5P58743 744 aa13.15□□□□□ -0.3
CCDC78-209ENST00000474647 CSNK1G2P78368 415 aa13.15□□□□□ -0.3
CCDC78-209ENST00000474647 RHAGQ02094 409 aa13.15□□□□□ -0.3
CCDC78-209ENST00000474647 CTBP1Q13363 440 aa13.15□□□□□ -0.3
CCDC78-209ENST00000474647 THOC5Q13769 683 aaKnown RBP13.15□□□□□ -0.3
CCDC78-209ENST00000474647 DHX34Q14147 1143 aaKnown RBP13.15□□□□□ -0.3
CCDC78-209ENST00000474647 SIX1Q15475 284 aaPredicted RBP13.15□□□□□ -0.3
CCDC78-209ENST00000474647 CCNG2Q16589 344 aa13.15□□□□□ -0.3
CCDC78-209ENST00000474647 ZNF468Q5VIY5 522 aaPredicted RBP13.15□□□□□ -0.3
CCDC78-209ENST00000474647 SLC26A11Q86WA9 606 aa13.15□□□□□ -0.3
CCDC78-209ENST00000474647 DOLPP1Q86YN1 238 aa13.15□□□□□ -0.3
CCDC78-209ENST00000474647 DENND6AQ8IWF6 608 aa13.15□□□□□ -0.3
CCDC78-209ENST00000474647 CPNE9Q8IYJ1 553 aa13.15□□□□□ -0.3
CCDC78-209ENST00000474647 EID3Q8N140 333 aa13.15□□□□□ -0.3
CCDC78-209ENST00000474647 KIF2BQ8N4N8 673 aa13.15□□□□□ -0.3
CCDC78-209ENST00000474647 OR5T3Q8NGG3 340 aa13.15□□□□□ -0.3
CCDC78-209ENST00000474647 PHF10Q8WUB8 498 aaKnown RBP13.15□□□□□ -0.3
CCDC78-209ENST00000474647 SLC13A3Q8WWT9 602 aa13.15□□□□□ -0.3
CCDC78-209ENST00000474647 SPOCK3Q9BQ16 436 aa13.15□□□□□ -0.3
CCDC78-209ENST00000474647 MCCC2Q9HCC0 563 aa13.15□□□□□ -0.3
CCDC78-209ENST00000474647 TRMT1Q9NXH9 659 aaKnown RBP13.15□□□□□ -0.3
CCDC78-209ENST00000474647 KCNE1BA0A087WTH5 132 aa13.14□□□□□ -0.31
CCDC78-209ENST00000474647 E9PLN8 166 aa13.14□□□□□ -0.31
CCDC78-209ENST00000474647 GFYI3L273 518 aa13.14□□□□□ -0.31
CCDC78-209ENST00000474647 TFECO14948 347 aaPredicted RBP13.14□□□□□ -0.31
CCDC78-209ENST00000474647 FANCGO15287 622 aa13.14□□□□□ -0.31
CCDC78-209ENST00000474647 NME2P1O60361 137 aa13.14□□□□□ -0.31
CCDC78-209ENST00000474647 CDC40O60508 579 aaKnown RBP eCLIP13.14□□□□□ -0.31
CCDC78-209ENST00000474647 ENO3P13929 434 aaPredicted RBP13.14□□□□□ -0.31
CCDC78-209ENST00000474647 NME2P22392 152 aa13.14□□□□□ -0.31
CCDC78-209ENST00000474647 PTGER1P34995 402 aa13.14□□□□□ -0.31
CCDC78-209ENST00000474647 GRK3P35626 688 aa13.14□□□□□ -0.31
CCDC78-209ENST00000474647 RFC3P40938 356 aa13.14□□□□□ -0.31
CCDC78-209ENST00000474647 OLR1P78380 273 aa13.14□□□□□ -0.31
CCDC78-209ENST00000474647 SARNPP82979 210 aaKnown RBP13.14□□□□□ -0.31
CCDC78-209ENST00000474647 RPS6KA1Q15418 735 aa13.14□□□□□ -0.31
CCDC78-209ENST00000474647 TESK1Q15569 626 aa13.14□□□□□ -0.31
CCDC78-209ENST00000474647 TRIP13Q15645 432 aaPredicted RBP13.14□□□□□ -0.31
CCDC78-209ENST00000474647 RNFT1Q5M7Z0 435 aa13.14□□□□□ -0.31
CCDC78-209ENST00000474647 CAPN13Q6MZZ7 669 aaPredicted RBP13.14□□□□□ -0.31
CCDC78-209ENST00000474647 ZNF549Q6P9A3 640 aa13.14□□□□□ -0.31
CCDC78-209ENST00000474647 MBOAT1Q6ZNC8 495 aa13.14□□□□□ -0.31
CCDC78-209ENST00000474647 CD163Q86VB7 1156 aa13.14□□□□□ -0.31
CCDC78-209ENST00000474647 C17orf64Q86WR6 236 aa13.14□□□□□ -0.31
CCDC78-209ENST00000474647 RPS19BP1Q86WX3 136 aaKnown RBP13.14□□□□□ -0.31
CCDC78-209ENST00000474647 CYP4X1Q8N118 509 aa13.14□□□□□ -0.31
CCDC78-209ENST00000474647 KCNJ9Q92806 393 aa13.14□□□□□ -0.31
CCDC78-209ENST00000474647 TMEM125Q96AQ2 219 aa13.14□□□□□ -0.31
CCDC78-209ENST00000474647 THAP11Q96EK4 314 aa13.14□□□□□ -0.31
CCDC78-209ENST00000474647 OR1F2PQ96R84 312 aa13.14□□□□□ -0.31
CCDC78-209ENST00000474647 VKORC1Q9BQB6 163 aa13.14□□□□□ -0.31
CCDC78-209ENST00000474647 ATG10Q9H0Y0 220 aa13.14□□□□□ -0.31
CCDC78-209ENST00000474647 LANCL2Q9NS86 450 aa13.14□□□□□ -0.31
CCDC78-209ENST00000474647 MTORP42345 2549 aa13.13□□□□□ -0.31
CCDC78-209ENST00000474647 FAM90A27PA6NNH2 459 aa13.13□□□□□ -0.31
CCDC78-209ENST00000474647 MAGEB17A8MXT2 336 aa13.13□□□□□ -0.31
CCDC78-209ENST00000474647 NDUFS4O43181 175 aa13.13□□□□□ -0.31
CCDC78-209ENST00000474647 LCMT2O60294 686 aaKnown RBP13.13□□□□□ -0.31
CCDC78-209ENST00000474647 DIAPH2O60879 1101 aa13.13□□□□□ -0.31
CCDC78-209ENST00000474647 B4GALT2O60909 372 aa13.13□□□□□ -0.31
CCDC78-209ENST00000474647 SERPIND1P05546 499 aa13.13□□□□□ -0.31
CCDC78-209ENST00000474647 TPOP07202 933 aa13.13□□□□□ -0.31
CCDC78-209ENST00000474647 FHP07954 510 aa13.13□□□□□ -0.31
CCDC78-209ENST00000474647 CDH1P12830 882 aa13.13□□□□□ -0.31
CCDC78-209ENST00000474647 SLC1A2P43004 574 aa13.13□□□□□ -0.31
CCDC78-209ENST00000474647 CYB561P49447 251 aa13.13□□□□□ -0.31
CCDC78-209ENST00000474647 ITGA8P53708 1063 aa13.13□□□□□ -0.31
CCDC78-209ENST00000474647 CDK16Q00536 496 aa13.13□□□□□ -0.31
CCDC78-209ENST00000474647 MEF2AQ02078 507 aaPredicted RBP13.13□□□□□ -0.31
CCDC78-209ENST00000474647 DRICH1Q6PGQ1 229 aaPredicted RBP13.13□□□□□ -0.31
CCDC78-209ENST00000474647 SPNS3Q6ZMD2 512 aa13.13□□□□□ -0.31
CCDC78-209ENST00000474647 CEP128Q6ZU80 1094 aa13.13□□□□□ -0.31
CCDC78-209ENST00000474647 PCGF5Q86SE9 256 aa13.13□□□□□ -0.31
CCDC78-209ENST00000474647 LGI4Q8N135 537 aa13.13□□□□□ -0.31
CCDC78-209ENST00000474647 PLPP5Q8NEB5 264 aa13.13□□□□□ -0.31
CCDC78-209ENST00000474647 TRIM58Q8NG06 486 aa13.13□□□□□ -0.31
CCDC78-209ENST00000474647 CD200R1Q8TD46 325 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms