RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 SPASTQ9UBP0 616 aa20.33■□□□□ 0.85
COL18A1-207ENST00000473212 SRRDQ9UH36 339 aa20.33■□□□□ 0.85
COL18A1-207ENST00000473212 OBSL1O75147 1896 aa20.33■□□□□ 0.85
COL18A1-207ENST00000473212 PRMT3O60678 531 aa20.33■□□□□ 0.84
COL18A1-207ENST00000473212 GBAP04062 536 aa20.33■□□□□ 0.84
COL18A1-207ENST00000473212 STSP08842 583 aa20.33■□□□□ 0.84
COL18A1-207ENST00000473212 CYP4F2P78329 520 aa20.33■□□□□ 0.84
COL18A1-207ENST00000473212 HKDC1Q2TB90 917 aa20.33■□□□□ 0.84
COL18A1-207ENST00000473212 POM121L1PQ3SYA9 428 aa20.33■□□□□ 0.84
COL18A1-207ENST00000473212 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.33■□□□□ 0.84
COL18A1-207ENST00000473212 ZNF852Q6ZMS4 543 aa20.33■□□□□ 0.84
COL18A1-207ENST00000473212 SLC7A5P1Q8MH63 180 aa20.33■□□□□ 0.84
COL18A1-207ENST00000473212 AMER2Q8N7J2 671 aa20.33■□□□□ 0.84
COL18A1-207ENST00000473212 ELMO1Q92556 727 aa20.33■□□□□ 0.84
COL18A1-207ENST00000473212 EFHD2Q96C19 240 aaPredicted RBP20.33■□□□□ 0.84
COL18A1-207ENST00000473212 MED8Q96G25 268 aa20.33■□□□□ 0.84
COL18A1-207ENST00000473212 CHST8Q9H2A9 424 aa20.33■□□□□ 0.84
COL18A1-207ENST00000473212 KLHL42Q9P2K6 505 aa20.33■□□□□ 0.84
COL18A1-207ENST00000473212 LYVE1Q9Y5Y7 322 aa20.33■□□□□ 0.84
COL18A1-207ENST00000473212 SGTAO43765 313 aa20.32■□□□□ 0.84
COL18A1-207ENST00000473212 TLL1O43897 1013 aa20.32■□□□□ 0.84
COL18A1-207ENST00000473212 NUAK1O60285 661 aa20.32■□□□□ 0.84
COL18A1-207ENST00000473212 INHAP05111 366 aa20.32■□□□□ 0.84
COL18A1-207ENST00000473212 RPLP0P05388 317 aaKnown RBP20.32■□□□□ 0.84
COL18A1-207ENST00000473212 ATP1B2P14415 290 aaPredicted RBP20.32■□□□□ 0.84
COL18A1-207ENST00000473212 PREPP48147 710 aa20.32■□□□□ 0.84
COL18A1-207ENST00000473212 PCYT1AP49585 367 aa20.32■□□□□ 0.84
COL18A1-207ENST00000473212 CRISP3P54108 245 aa20.32■□□□□ 0.84
COL18A1-207ENST00000473212 PARP16Q8N5Y8 322 aa20.32■□□□□ 0.84
COL18A1-207ENST00000473212 TXNDC15Q96J42 360 aa20.32■□□□□ 0.84
COL18A1-207ENST00000473212 LYSMD1Q96S90 227 aa20.32■□□□□ 0.84
COL18A1-207ENST00000473212 DOHHQ9BU89 302 aa20.32■□□□□ 0.84
COL18A1-207ENST00000473212 TMEM121BQ9BXQ6 578 aaPredicted RBP20.32■□□□□ 0.84
COL18A1-207ENST00000473212 PLCXD1Q9NUJ7 323 aa20.32■□□□□ 0.84
COL18A1-207ENST00000473212 QPCTLQ9NXS2 382 aa20.32■□□□□ 0.84
COL18A1-207ENST00000473212 CAB39Q9Y376 341 aaPredicted RBP20.32■□□□□ 0.84
COL18A1-207ENST00000473212 UGT2A1Q9Y4X1 527 aa20.32■□□□□ 0.84
COL18A1-207ENST00000473212 IGLV3-16A0A075B6K0 115 aa20.32■□□□□ 0.84
COL18A1-207ENST00000473212 GABRR3A8MPY1 467 aa20.32■□□□□ 0.84
COL18A1-207ENST00000473212 GFYI3L273 518 aa20.32■□□□□ 0.84
COL18A1-207ENST00000473212 DPM1O60762 260 aa20.32■□□□□ 0.84
COL18A1-207ENST00000473212 GCM2O75603 506 aaPredicted RBP20.32■□□□□ 0.84
COL18A1-207ENST00000473212 OR1E2P47887 323 aa20.32■□□□□ 0.84
COL18A1-207ENST00000473212 SPINT3P49223 89 aa20.32■□□□□ 0.84
COL18A1-207ENST00000473212 NKX2-5P52952 324 aaPredicted RBP20.32■□□□□ 0.84
COL18A1-207ENST00000473212 ACSM2AQ08AH3 577 aa20.32■□□□□ 0.84
COL18A1-207ENST00000473212 DOC2AQ14183 400 aa20.32■□□□□ 0.84
COL18A1-207ENST00000473212 DEPDC1Q5TB30 811 aa20.32■□□□□ 0.84
COL18A1-207ENST00000473212 ACSM2BQ68CK6 577 aa20.32■□□□□ 0.84
COL18A1-207ENST00000473212 NAGSQ8N159 534 aa20.32■□□□□ 0.84
COL18A1-207ENST00000473212 OR4K3Q96R72 315 aa20.32■□□□□ 0.84
COL18A1-207ENST00000473212 SIAEQ9HAT2 523 aa20.32■□□□□ 0.84
COL18A1-207ENST00000473212 ITM2CQ9NQX7 267 aa20.32■□□□□ 0.84
COL18A1-207ENST00000473212 NDUFAF4Q9P032 175 aa20.32■□□□□ 0.84
COL18A1-207ENST00000473212 RAPGEFL1Q9UHV5 662 aa20.32■□□□□ 0.84
COL18A1-207ENST00000473212 SLC6A14Q9UN76 642 aa20.32■□□□□ 0.84
COL18A1-207ENST00000473212 PADI2Q9Y2J8 665 aa20.32■□□□□ 0.84
COL18A1-207ENST00000473212 MYO7AQ13402 2215 aa20.32■□□□□ 0.84
COL18A1-207ENST00000473212 UNC80Q8N2C7 3258 aa20.32■□□□□ 0.84
COL18A1-207ENST00000473212 SERTM1A2A2V5 107 aa20.31■□□□□ 0.84
COL18A1-207ENST00000473212 ARHGEF33A8MVX0 844 aa20.31■□□□□ 0.84
COL18A1-207ENST00000473212 PCDH7O60245 1069 aa20.31■□□□□ 0.84
COL18A1-207ENST00000473212 PCSK2P16519 638 aa20.31■□□□□ 0.84
COL18A1-207ENST00000473212 CYP2A7P20853 494 aa20.31■□□□□ 0.84
COL18A1-207ENST00000473212 RCVRNP35243 200 aa20.31■□□□□ 0.84
COL18A1-207ENST00000473212 ATN1P54259 1190 aaPredicted RBP20.31■□□□□ 0.84
COL18A1-207ENST00000473212 RAE1P78406 368 aaKnown RBP20.31■□□□□ 0.84
COL18A1-207ENST00000473212 PPIGQ13427 754 aaKnown RBP eCLIP20.31■□□□□ 0.847e-18■□□□□ 10.6
COL18A1-207ENST00000473212 RGNQ15493 299 aa20.31■□□□□ 0.84
COL18A1-207ENST00000473212 C22orf39Q6P5X5 142 aa20.31■□□□□ 0.84
COL18A1-207ENST00000473212 USP45Q70EL2 814 aa20.31■□□□□ 0.84
COL18A1-207ENST00000473212 HEATR4Q86WZ0 1026 aa20.31■□□□□ 0.84
COL18A1-207ENST00000473212 C1orf52Q8N6N3 182 aaKnown RBP20.31■□□□□ 0.84
COL18A1-207ENST00000473212 RAET1EQ8TD07 263 aa20.31■□□□□ 0.84
COL18A1-207ENST00000473212 ECHDC3Q96DC8 303 aa20.31■□□□□ 0.84
COL18A1-207ENST00000473212 CENPOQ9BU64 300 aa20.31■□□□□ 0.84
COL18A1-207ENST00000473212 MTG2Q9H4K7 406 aa20.31■□□□□ 0.84
COL18A1-207ENST00000473212 FKBP14Q9NWM8 211 aa20.31■□□□□ 0.84
COL18A1-207ENST00000473212 CCDC88CQ9P219 2028 aa20.31■□□□□ 0.84
COL18A1-207ENST00000473212 TTC36A6NLP5 189 aa20.31■□□□□ 0.84
COL18A1-207ENST00000473212 SCAMP2O15127 329 aaKnown RBP20.31■□□□□ 0.84
COL18A1-207ENST00000473212 OLFM2O95897 454 aa20.31■□□□□ 0.84
COL18A1-207ENST00000473212 PTHP01270 115 aa20.31■□□□□ 0.84
COL18A1-207ENST00000473212 SOD2P04179 222 aa20.31■□□□□ 0.84
COL18A1-207ENST00000473212 ADORA3P0DMS8 318 aa20.31■□□□□ 0.84
COL18A1-207ENST00000473212 ALOX12P18054 663 aa20.31■□□□□ 0.84
COL18A1-207ENST00000473212 S100A5P33763 92 aa20.31■□□□□ 0.84
COL18A1-207ENST00000473212 CA8P35219 290 aa20.31■□□□□ 0.84
COL18A1-207ENST00000473212 CSTF3Q12996 717 aaKnown RBP20.31■□□□□ 0.84
COL18A1-207ENST00000473212 NAE1Q13564 534 aa20.31■□□□□ 0.84
COL18A1-207ENST00000473212 COX20Q5RI15 118 aa20.31■□□□□ 0.84
COL18A1-207ENST00000473212 CPTPQ5TA50 214 aa20.31■□□□□ 0.84
COL18A1-207ENST00000473212 DESI1Q6ICB0 168 aa20.31■□□□□ 0.84
COL18A1-207ENST00000473212 PNCKQ6P2M8 343 aa20.31■□□□□ 0.84
COL18A1-207ENST00000473212 Q6ZVL8 140 aa20.31■□□□□ 0.84
COL18A1-207ENST00000473212 HSD11B1LQ7Z5J1 315 aa20.31■□□□□ 0.84
COL18A1-207ENST00000473212 OR10G2Q8NGC3 310 aa20.31■□□□□ 0.84
COL18A1-207ENST00000473212 WDR20Q8TBZ3 569 aa20.31■□□□□ 0.84
COL18A1-207ENST00000473212 UTP15Q8TED0 518 aaKnown RBP20.31■□□□□ 0.84
COL18A1-207ENST00000473212 Q96MT0 163 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms