RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 NCF1BA6NI72 391 aaPredicted RBP2.49□□□□□ -2.01
XRN1-210ENST00000472697 NCF1CA8MVU1 366 aaPredicted RBP2.49□□□□□ -2.01
XRN1-210ENST00000472697 H3BMH7 237 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 E2F3O00716 465 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 FPGTO14772 594 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 TEX28O15482 410 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 SAP30O75446 220 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 UFL1O94874 794 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 UGT2B4P06133 528 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 CALCBP10092 127 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 ODC1P11926 461 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 RPA2P15927 270 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 TPSB2P20231 275 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 UGT1A1P22309 533 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 KCNA5P22460 613 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 ADRA1AP35348 466 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 RGS4P49798 205 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 HNRNPH2P55795 449 aaKnown RBP2.49□□□□□ -2.01
XRN1-210ENST00000472697 HUNKP57058 714 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 PPP1R8Q12972 351 aaKnown RBP2.49□□□□□ -2.01
XRN1-210ENST00000472697 DPYSQ14117 519 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 TPSAB1Q15661 275 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 INAQ16352 499 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 CARTPTQ16568 116 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 CDO1Q16878 200 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 CEP78Q5JTW2 689 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 RIPPLY2Q5TAB7 128 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 ATF7IP2Q5U623 682 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 SLC39A4Q6P5W5 647 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 CACNA2D4Q7Z3S7 1137 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 MEX3DQ86XN8 651 aaKnown RBP2.49□□□□□ -2.01
XRN1-210ENST00000472697 ARHGEF19Q8IW93 802 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 CHERPQ8IWX8 916 aaKnown RBP2.49□□□□□ -2.01
XRN1-210ENST00000472697 PDCL2Q8N4E4 241 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 ZNF611Q8N823 705 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 EXD1Q8NHP7 514 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 C9orf43Q8TAL5 461 aaPredicted RBP2.49□□□□□ -2.01
XRN1-210ENST00000472697 RNF128Q8TEB7 428 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 SLC20A1Q8WUM9 679 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 INPP5DQ92835 1189 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 MOB3AQ96BX8 217 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 LINGO1Q96FE5 620 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 PRMT1Q99873 361 aaKnown RBP2.49□□□□□ -2.01
XRN1-210ENST00000472697 BCL7BQ9BQE9 202 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 TRMOQ9BU70 441 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 CDH20Q9HBT6 801 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 HHATLQ9HCP6 504 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 ACKR4Q9NPB9 350 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 RPRD1BQ9NQG5 326 aaKnown RBP2.49□□□□□ -2.01
XRN1-210ENST00000472697 MIOSQ9NXC5 875 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 DPP3Q9NY33 737 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 CTNNA3Q9UI47 895 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 NIP7Q9Y221 180 aaKnown RBP eCLIP2.49□□□□□ -2.01
XRN1-210ENST00000472697 HS3ST3A1Q9Y663 406 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 UBE4BO95155 1302 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 ZNF541Q9H0D2 1346 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 A0A1B0GVT2 93 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 TMEM129A0AVI4 362 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 MOSPD3O75425 235 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 BMP10O95393 424 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 OPN1MWP04001 364 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 OPN1MW2P0DN77 364 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 OPN1MW3P0DN78 364 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 JUNBP17275 347 aaPredicted RBP2.49□□□□□ -2.01
XRN1-210ENST00000472697 TSPAN8P19075 237 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 HNF1AP20823 631 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 IL10P22301 178 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 NPBWR1P48145 328 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 NR0B1P51843 470 aaKnown RBP2.49□□□□□ -2.01
XRN1-210ENST00000472697 MFAP3P55082 362 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 TAS2R38P59533 333 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 HERV-K104P63124 156 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 CSNK2A1P68400 391 aaPredicted RBP2.49□□□□□ -2.01
XRN1-210ENST00000472697 COX10Q12887 443 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 MAD2L1Q13257 205 aaPredicted RBP2.49□□□□□ -2.01
XRN1-210ENST00000472697 SLC25A53Q5H9E4 307 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 PLAC9Q5JTB6 97 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 LRRC38Q5VT99 294 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 ZDHHC20Q5W0Z9 365 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 PYHIN1Q6K0P9 492 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 METTL2BQ6P1Q9 378 aaKnown RBP2.49□□□□□ -2.01
XRN1-210ENST00000472697 CORO6Q6QEF8 472 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 C15orf52Q6ZUT6 534 aaKnown RBP2.49□□□□□ -2.01
XRN1-210ENST00000472697 Q75L30 129 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 RHOUQ7L0Q8 258 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.49□□□□□ -2.01
XRN1-210ENST00000472697 ZDHHC17Q8IUH5 632 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 DENND6BQ8NEG7 585 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 CSNK2A3Q8NEV1 391 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 METTL2AQ96IZ6 378 aaKnown RBP2.49□□□□□ -2.01
XRN1-210ENST00000472697 HARBI1Q96MB7 349 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 COQ7Q99807 217 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 DCLK3Q9C098 648 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 WWTR1Q9GZV5 400 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 SHARPINQ9H0F6 387 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 WNT5BQ9H1J7 359 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 VCX2Q9H322 139 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 GAR1Q9NY12 217 aaKnown RBP2.49□□□□□ -2.01
XRN1-210ENST00000472697 ONECUT1Q9UBC0 465 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 BAIAP2L1Q9UHR4 511 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms