RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 DNAJC7Q99615 494 aa13.05□□□□□ -0.32
SMURF1-203ENST00000472627 TTYH2Q9BSA4 534 aa13.05□□□□□ -0.32
SMURF1-203ENST00000472627 NHEJ1Q9H9Q4 299 aaPredicted RBP13.05□□□□□ -0.32
SMURF1-203ENST00000472627 ABCF3Q9NUQ8 709 aa13.05□□□□□ -0.32
SMURF1-203ENST00000472627 GOLGA6L19H0YKK7 550 aa13.04□□□□□ -0.32
SMURF1-203ENST00000472627 ARHGEF9O43307 516 aa13.04□□□□□ -0.32
SMURF1-203ENST00000472627 WDR1O75083 606 aa13.04□□□□□ -0.32
SMURF1-203ENST00000472627 RDH16O75452 317 aa13.04□□□□□ -0.32
SMURF1-203ENST00000472627 MATN4O95460 622 aa13.04□□□□□ -0.32
SMURF1-203ENST00000472627 SLC35G6P0C7Q6 338 aa13.04□□□□□ -0.32
SMURF1-203ENST00000472627 PTPN7P35236 360 aa13.04□□□□□ -0.32
SMURF1-203ENST00000472627 MARCKSL1P49006 195 aa13.04□□□□□ -0.32
SMURF1-203ENST00000472627 DLX5P56178 289 aa13.04□□□□□ -0.32
SMURF1-203ENST00000472627 RHAGQ02094 409 aa13.04□□□□□ -0.32
SMURF1-203ENST00000472627 ACVR1Q04771 509 aa13.04□□□□□ -0.32
SMURF1-203ENST00000472627 SHEQ5VZ18 495 aa13.04□□□□□ -0.32
SMURF1-203ENST00000472627 C11orf63Q6NUN7 778 aa13.04□□□□□ -0.32
SMURF1-203ENST00000472627 TMEM214Q6NUQ4 689 aaKnown RBP13.04□□□□□ -0.32
SMURF1-203ENST00000472627 ZNF534Q76KX8 674 aa13.04□□□□□ -0.32
SMURF1-203ENST00000472627 SLC22A16Q86VW1 577 aa13.04□□□□□ -0.32
SMURF1-203ENST00000472627 CYP4X1Q8N118 509 aa13.04□□□□□ -0.32
SMURF1-203ENST00000472627 KIF2BQ8N4N8 673 aa13.04□□□□□ -0.32
SMURF1-203ENST00000472627 OTUD6BQ8N6M0 293 aa13.04□□□□□ -0.32
SMURF1-203ENST00000472627 FAM71DQ8N9W8 422 aa13.04□□□□□ -0.32
SMURF1-203ENST00000472627 PPHLN1Q8NEY8 458 aaKnown RBP13.04□□□□□ -0.32
SMURF1-203ENST00000472627 OR52N2Q8NGI0 321 aa13.04□□□□□ -0.32
SMURF1-203ENST00000472627 OR52K1Q8NGK4 314 aa13.04□□□□□ -0.32
SMURF1-203ENST00000472627 PEX11GQ96HA9 241 aa13.04□□□□□ -0.32
SMURF1-203ENST00000472627 SMC6Q96SB8 1091 aa13.04□□□□□ -0.32
SMURF1-203ENST00000472627 FAM118BQ9BPY3 351 aa13.04□□□□□ -0.32
SMURF1-203ENST00000472627 RBCK1Q9BYM8 510 aa13.04□□□□□ -0.32
SMURF1-203ENST00000472627 DEFB127Q9H1M4 99 aa13.04□□□□□ -0.32
SMURF1-203ENST00000472627 PNPLA3Q9NST1 481 aa13.04□□□□□ -0.32
SMURF1-203ENST00000472627 CRIM1Q9NZV1 1036 aa13.04□□□□□ -0.32
SMURF1-203ENST00000472627 SLC2A6Q9UGQ3 507 aa13.04□□□□□ -0.32
SMURF1-203ENST00000472627 TSR3Q9UJK0 312 aaKnown RBP13.04□□□□□ -0.32
SMURF1-203ENST00000472627 ERVK-11Q9UQG0 969 aa13.04□□□□□ -0.32
SMURF1-203ENST00000472627 KCNE1BA0A087WTH5 132 aa13.03□□□□□ -0.32
SMURF1-203ENST00000472627 OR2W5A6NFC9 320 aa13.03□□□□□ -0.32
SMURF1-203ENST00000472627 SAGE2PA6NJ88 616 aa13.03□□□□□ -0.32
SMURF1-203ENST00000472627 ARHGEF33A8MVX0 844 aa13.03□□□□□ -0.32
SMURF1-203ENST00000472627 E7EVH7 732 aa13.03□□□□□ -0.32
SMURF1-203ENST00000472627 CD3EAPO15446 510 aaKnown RBP13.03□□□□□ -0.32
SMURF1-203ENST00000472627 ATE1O95260 518 aa13.03□□□□□ -0.32
SMURF1-203ENST00000472627 METTL18O95568 372 aa13.03□□□□□ -0.32
SMURF1-203ENST00000472627 FHP07954 510 aa13.03□□□□□ -0.32
SMURF1-203ENST00000472627 GLI4P10075 376 aa13.03□□□□□ -0.32
SMURF1-203ENST00000472627 RPS3P23396 243 aaKnown RBP eCLIP13.03□□□□□ -0.32
SMURF1-203ENST00000472627 GRK3P35626 688 aa13.03□□□□□ -0.32
SMURF1-203ENST00000472627 EIF3BP55884 814 aaKnown RBP13.03□□□□□ -0.32
SMURF1-203ENST00000472627 GPR85P60893 370 aa13.03□□□□□ -0.32
SMURF1-203ENST00000472627 PPIAP62937 165 aaKnown RBP13.03□□□□□ -0.32
SMURF1-203ENST00000472627 SEMA3AQ14563 771 aa13.03□□□□□ -0.32
SMURF1-203ENST00000472627 HERC3Q15034 1050 aa13.03□□□□□ -0.32
SMURF1-203ENST00000472627 EMC4Q5J8M3 183 aa13.03□□□□□ -0.32
SMURF1-203ENST00000472627 ZNF227Q86WZ6 799 aa13.03□□□□□ -0.32
SMURF1-203ENST00000472627 PLD3Q8IV08 490 aa13.03□□□□□ -0.32
SMURF1-203ENST00000472627 ARMC2Q8NEN0 867 aa13.03□□□□□ -0.32
SMURF1-203ENST00000472627 OR5M9Q8NGP3 310 aa13.03□□□□□ -0.32
SMURF1-203ENST00000472627 ZCCHC10Q8TBK6 192 aa13.03□□□□□ -0.32
SMURF1-203ENST00000472627 TSLPQ969D9 159 aa13.03□□□□□ -0.32
SMURF1-203ENST00000472627 TBC1D20Q96BZ9 403 aa13.03□□□□□ -0.32
SMURF1-203ENST00000472627 ATG10Q9H0Y0 220 aa13.03□□□□□ -0.32
SMURF1-203ENST00000472627 P2RY12Q9H244 342 aa13.03□□□□□ -0.32
SMURF1-203ENST00000472627 GOLPH3Q9H4A6 298 aa13.03□□□□□ -0.32
SMURF1-203ENST00000472627 SYNPO2LQ9H987 977 aa13.03□□□□□ -0.32
SMURF1-203ENST00000472627 DMRT3Q9NQL9 472 aa13.03□□□□□ -0.32
SMURF1-203ENST00000472627 TMEM184CQ9NVA4 438 aa13.03□□□□□ -0.32
SMURF1-203ENST00000472627 PHF3Q92576 2039 aaKnown RBP13.03□□□□□ -0.32
SMURF1-203ENST00000472627 CSPG4Q6UVK1 2322 aa13.02□□□□□ -0.32
SMURF1-203ENST00000472627 A0A0G2JNJ9 132 aa13.02□□□□□ -0.33
SMURF1-203ENST00000472627 KIAA1324LA8MWY0 1029 aaPredicted RBP13.02□□□□□ -0.33
SMURF1-203ENST00000472627 H7BY64 318 aa13.02□□□□□ -0.33
SMURF1-203ENST00000472627 PSIP1O75475 530 aaKnown RBP13.02□□□□□ -0.33
SMURF1-203ENST00000472627 GOSR1O95249 250 aa13.02□□□□□ -0.33
SMURF1-203ENST00000472627 SYF2O95926 243 aaKnown RBP13.02□□□□□ -0.33
SMURF1-203ENST00000472627 HOXC12P31275 282 aa13.02□□□□□ -0.33
SMURF1-203ENST00000472627 IQCB1Q15051 598 aa13.02□□□□□ -0.33
SMURF1-203ENST00000472627 PCBP2Q15366 365 aaKnown RBP eCLIP13.02□□□□□ -0.335e-8■■■■■ 64.2
SMURF1-203ENST00000472627 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.02□□□□□ -0.33
SMURF1-203ENST00000472627 RNF187Q5TA31 235 aaPredicted RBP13.02□□□□□ -0.33
SMURF1-203ENST00000472627 NDUFAF5Q5TEU4 345 aa13.02□□□□□ -0.33
SMURF1-203ENST00000472627 PRSS41Q7RTY9 318 aa13.02□□□□□ -0.33
SMURF1-203ENST00000472627 ASPGQ86U10 573 aa13.02□□□□□ -0.33
SMURF1-203ENST00000472627 LDB1Q86U70 411 aaPredicted RBP13.02□□□□□ -0.33
SMURF1-203ENST00000472627 PRIMA1Q86XR5 153 aa13.02□□□□□ -0.33
SMURF1-203ENST00000472627 GPALPP1Q8IXQ4 340 aa13.02□□□□□ -0.33
SMURF1-203ENST00000472627 KRT35Q92764 455 aa13.02□□□□□ -0.33
SMURF1-203ENST00000472627 PRAP1Q96NZ9 151 aa13.02□□□□□ -0.33
SMURF1-203ENST00000472627 CCDC77Q9BR77 488 aa13.02□□□□□ -0.33
SMURF1-203ENST00000472627 BEX4Q9NWD9 120 aaPredicted RBP13.02□□□□□ -0.33
SMURF1-203ENST00000472627 IFNKQ9P0W0 207 aa13.02□□□□□ -0.33
SMURF1-203ENST00000472627 Q9UFV3 132 aa13.02□□□□□ -0.33
SMURF1-203ENST00000472627 FOXD3Q9UJU5 478 aaPredicted RBP13.02□□□□□ -0.33
SMURF1-203ENST00000472627 ACAD8Q9UKU7 415 aa13.02□□□□□ -0.33
SMURF1-203ENST00000472627 R3HDM2Q9Y2K5 976 aaKnown RBP13.02□□□□□ -0.33
SMURF1-203ENST00000472627 NAALAD2Q9Y3Q0 740 aa13.02□□□□□ -0.33
SMURF1-203ENST00000472627 TCAF1Q9Y4C2 921 aa13.02□□□□□ -0.33
SMURF1-203ENST00000472627 SLC22A7Q9Y694 548 aa13.02□□□□□ -0.33
SMURF1-203ENST00000472627 E5RI56 91 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms