RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 CAPN13Q6MZZ7 669 aaPredicted RBP7.61□□□□□ -1.19
USP48-207ENST00000471752 SBSNQ6UWP8 590 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 CPEB2Q7Z5Q1 589 aaKnown RBP7.61□□□□□ -1.19
USP48-207ENST00000471752 ASPGQ86U10 573 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 ZNF227Q86WZ6 799 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 CRLF3Q8IUI8 442 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 CNTN4Q8IWV2 1026 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 SRRM1Q8IYB3 904 aaKnown RBP7.61□□□□□ -1.19
USP48-207ENST00000471752 BEST3Q8N1M1 668 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 C17orf53Q8N3J3 647 aaPredicted RBP7.61□□□□□ -1.19
USP48-207ENST00000471752 AFAP1L2Q8N4X5 818 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 GPATCH11Q8N954 259 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 MFSD9Q8NBP5 474 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 TMEM52Q8NDY8 209 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 OR4K1Q8NGD4 311 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 OR56A3Q8NH54 315 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 MCOLN3Q8TDD5 553 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 TM9SF4Q92544 642 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 NEIL2Q969S2 332 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 ESAMQ96AP7 390 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.61□□□□□ -1.19
USP48-207ENST00000471752 CCDC68Q9H2F9 335 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 OLAHQ9NV23 265 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 ASIC3Q9UHC3 531 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 SH3BGRL2Q9UJC5 107 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 CDC14AQ9UNH5 594 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 MTO1Q9Y2Z2 717 aaKnown RBP7.61□□□□□ -1.19
USP48-207ENST00000471752 VWA7Q9Y334 891 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 TEX264Q9Y6I9 313 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 ANKRD17O75179 2603 aaKnown RBP7.61□□□□□ -1.19
USP48-207ENST00000471752 ARHGAP10A1A4S6 786 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 NPEPPSL1A6NEC2 478 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 PCDH17O14917 1159 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 PFDN6O15212 129 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 UNC5CO95185 931 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 NSA2O95478 260 aaKnown RBP7.6□□□□□ -1.19
USP48-207ENST00000471752 ZNF888P0CJ79 500 aaPredicted RBP7.6□□□□□ -1.19
USP48-207ENST00000471752 EDN3P14138 238 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 MAOAP21397 527 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 CXCR2P25025 360 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 PPP2R1BP30154 601 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 AVPR1BP47901 424 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 FNTAP49354 379 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 HNRNPFP52597 415 aaKnown RBP7.6□□□□□ -1.19
USP48-207ENST00000471752 TAS2R39P59534 338 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 HSF1Q00613 529 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 TUBA3CQ13748 450 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 ZRSR2Q15696 482 aaKnown RBP7.6□□□□□ -1.19
USP48-207ENST00000471752 PPP1R3AQ16821 1122 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 BTBD16Q32M84 506 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 SFT2D3Q587I9 215 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 ACER2Q5QJU3 275 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 FAM219BQ5XKK7 198 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 STEAP4Q687X5 459 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 SP5Q6BEB4 398 aaPredicted RBP7.6□□□□□ -1.19
USP48-207ENST00000471752 H3F3CQ6NXT2 135 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 TUBA3EQ6PEY2 450 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 LCTLQ6UWM7 567 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 C16orf47Q6ZP98 133 aaPredicted RBP7.6□□□□□ -1.19
USP48-207ENST00000471752 CAPN12Q6ZSI9 719 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 FGD2Q7Z6J4 655 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 C17orf64Q86WR6 236 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 CHERPQ8IWX8 916 aaKnown RBP7.6□□□□□ -1.19
USP48-207ENST00000471752 ABHD11Q8NFV4 315 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 MVB12AQ96EY5 273 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 CERS2Q96G23 380 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 FAM167BQ9BTA0 163 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 MCMBPQ9BTE3 642 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 RHBGQ9H310 441 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 EPS8L2Q9H6S3 715 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 CAB39LQ9H9S4 337 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 PPANQ9NQ55 473 aaKnown RBP7.6□□□□□ -1.19
USP48-207ENST00000471752 NECTIN3Q9NQS3 549 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 KLHL1Q9NR64 748 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 AGPAT4Q9NRZ5 378 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 ARL15Q9NXU5 204 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 TAS2R13Q9NYV9 303 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 VPS9D1Q9Y2B5 631 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 SNX24Q9Y343 169 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 ASB1Q9Y576 335 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 CLDN16Q9Y5I7 305 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 MRFAP1Q9Y605 127 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 PKDREJQ9NTG1 2253 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 ZFHX3Q15911 3703 aa7.6□□□□□ -1.19
USP48-207ENST00000471752 SPG11Q96JI7 2443 aa7.59□□□□□ -1.19
USP48-207ENST00000471752 TRAV17A0A0B4J275 112 aa7.59□□□□□ -1.19
USP48-207ENST00000471752 H0YIG0 161 aa7.59□□□□□ -1.19
USP48-207ENST00000471752 C19orf84I3L1E1 186 aa7.59□□□□□ -1.19
USP48-207ENST00000471752 TAPBPO15533 448 aa7.59□□□□□ -1.19
USP48-207ENST00000471752 NDUFS4O43181 175 aa7.59□□□□□ -1.19
USP48-207ENST00000471752 PRKNO60260 465 aaPredicted RBP7.59□□□□□ -1.19
USP48-207ENST00000471752 GALR3O60755 368 aaPredicted RBP7.59□□□□□ -1.19
USP48-207ENST00000471752 FAM155BO75949 473 aa7.59□□□□□ -1.19
USP48-207ENST00000471752 CCNDBP1O95273 360 aa7.59□□□□□ -1.19
USP48-207ENST00000471752 C1QAP02745 245 aa7.59□□□□□ -1.19
USP48-207ENST00000471752 C8GP07360 202 aa7.59□□□□□ -1.19
USP48-207ENST00000471752 SNRPB2P08579 225 aaKnown RBP7.59□□□□□ -1.19
USP48-207ENST00000471752 STSP08842 583 aa7.59□□□□□ -1.19
USP48-207ENST00000471752 SMIM10L1P0DMW3 83 aa7.59□□□□□ -1.19
USP48-207ENST00000471752 RFC3P40938 356 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms