RNA–Protein interactions for RNA: ENST00000470944.1

SOD1-203, Transcript of superoxide dismutase 1, humanhuman

TSL 2

Gene SOD1, Length 1,746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-203ENST00000470944 C19orf60Q96EN9 201 aa27.53■■■□□ 2
SOD1-203ENST00000470944 SEC16BQ96JE7 1060 aa27.53■■■□□ 2
SOD1-203ENST00000470944 STRADBQ9C0K7 418 aa27.53■■■□□ 2
SOD1-203ENST00000470944 APMAPQ9HDC9 416 aa27.53■■■□□ 2
SOD1-203ENST00000470944 NPHS2Q9NP85 383 aa27.53■■■□□ 2
SOD1-203ENST00000470944 ADGRE2Q9UHX3 823 aa27.53■■■□□ 2
SOD1-203ENST00000470944 GMNCA6NCL1 334 aa27.52■■■□□ 2
SOD1-203ENST00000470944 SAP18O00422 153 aaKnown RBP27.52■■■□□ 2
SOD1-203ENST00000470944 SERPINB1P30740 379 aa27.52■■■□□ 2
SOD1-203ENST00000470944 C10orf62Q5T681 223 aaPredicted RBP27.52■■■□□ 2
SOD1-203ENST00000470944 Q6ZSR9 355 aa27.52■■■□□ 2
SOD1-203ENST00000470944 RFWD2Q8NHY2 731 aa27.52■■■□□ 2
SOD1-203ENST00000470944 ADAMTS14Q8WXS8 1223 aa27.52■■■□□ 2
SOD1-203ENST00000470944 F2RL3Q96RI0 385 aa27.52■■■□□ 2
SOD1-203ENST00000470944 CMKLR1Q99788 373 aa27.52■■■□□ 2
SOD1-203ENST00000470944 RABEP2Q9H5N1 569 aa27.52■■■□□ 2
SOD1-203ENST00000470944 RUVBL1Q9Y265 456 aaKnown RBP27.52■■■□□ 2
SOD1-203ENST00000470944 LRIT2A6NDA9 550 aa27.51■■□□□ 1.99
SOD1-203ENST00000470944 C4orf51C9J302 202 aa27.51■■□□□ 1.99
SOD1-203ENST00000470944 SHOX2O60902 331 aaPredicted RBP27.51■■□□□ 1.99
SOD1-203ENST00000470944 SERPINA6P08185 405 aa27.51■■□□□ 1.99
SOD1-203ENST00000470944 SLC35G6P0C7Q6 338 aa27.51■■□□□ 1.99
SOD1-203ENST00000470944 ACY1Q03154 408 aa27.51■■□□□ 1.99
SOD1-203ENST00000470944 TARDBPQ13148 414 aaKnown RBP eCLIP27.51■■□□□ 1.99
SOD1-203ENST00000470944 PWP1Q13610 501 aa27.51■■□□□ 1.99
SOD1-203ENST00000470944 XKR7Q5GH72 579 aa27.51■■□□□ 1.99
SOD1-203ENST00000470944 PRAMEF17Q5VTA0 474 aa27.51■■□□□ 1.99
SOD1-203ENST00000470944 RNF165Q6ZSG1 346 aa27.51■■□□□ 1.99
SOD1-203ENST00000470944 CAMKVQ8NCB2 501 aa27.51■■□□□ 1.99
SOD1-203ENST00000470944 NT5CQ8TCD5 201 aa27.51■■□□□ 1.99
SOD1-203ENST00000470944 RNF31Q96EP0 1072 aa27.51■■□□□ 1.99
SOD1-203ENST00000470944 LIN37Q96GY3 246 aaPredicted RBP27.51■■□□□ 1.99
SOD1-203ENST00000470944 SLC6A16Q9GZN6 736 aa27.51■■□□□ 1.99
SOD1-203ENST00000470944 BRF2Q9HAW0 419 aa27.51■■□□□ 1.99
SOD1-203ENST00000470944 VTI1BQ9UEU0 232 aa27.51■■□□□ 1.99
SOD1-203ENST00000470944 GIMAP2Q9UG22 337 aa27.51■■□□□ 1.99
SOD1-203ENST00000470944 SLC12A4Q9UP95 1085 aa27.51■■□□□ 1.99
SOD1-203ENST00000470944 MRPS2Q9Y399 296 aaKnown RBP27.51■■□□□ 1.99
SOD1-203ENST00000470944 LOXL2Q9Y4K0 774 aa27.51■■□□□ 1.99
SOD1-203ENST00000470944 SERTM1A2A2V5 107 aa27.5■■□□□ 1.99
SOD1-203ENST00000470944 SLCO1B7G3V0H7 640 aa27.5■■□□□ 1.99
SOD1-203ENST00000470944 OR2B3O76000 313 aa27.5■■□□□ 1.99
SOD1-203ENST00000470944 ITIH1P19827 911 aa27.5■■□□□ 1.99
SOD1-203ENST00000470944 PHEXP78562 749 aa27.5■■□□□ 1.99
SOD1-203ENST00000470944 CSTF3Q12996 717 aaKnown RBP27.5■■□□□ 1.99
SOD1-203ENST00000470944 PRTGQ2VWP7 1150 aa27.5■■□□□ 1.99
SOD1-203ENST00000470944 RAB11FIP2Q7L804 512 aa27.5■■□□□ 1.99
SOD1-203ENST00000470944 CMTM7Q96FZ5 175 aa27.5■■□□□ 1.99
SOD1-203ENST00000470944 FAM107BQ9H098 131 aa27.5■■□□□ 1.99
SOD1-203ENST00000470944 IRAK4Q9NWZ3 460 aa27.5■■□□□ 1.99
SOD1-203ENST00000470944 DCTN4Q9UJW0 460 aa27.5■■□□□ 1.99
SOD1-203ENST00000470944 TMX2-CTNND1H3BSU7 103 aa27.5■■□□□ 1.99
SOD1-203ENST00000470944 TGDSO95455 350 aa27.5■■□□□ 1.99
SOD1-203ENST00000470944 DRD4P21917 467 aa27.5■■□□□ 1.99
SOD1-203ENST00000470944 AQP5P55064 265 aa27.5■■□□□ 1.99
SOD1-203ENST00000470944 ZNF33BQ06732 778 aa27.5■■□□□ 1.99
SOD1-203ENST00000470944 SLC9B1Q4ZJI4 515 aa27.5■■□□□ 1.99
SOD1-203ENST00000470944 KHDRBS2Q5VWX1 349 aaKnown RBP27.5■■□□□ 1.99
SOD1-203ENST00000470944 TMPRSS12Q86WS5 348 aa27.5■■□□□ 1.99
SOD1-203ENST00000470944 ARHGEF39Q8N4T4 335 aa27.5■■□□□ 1.99
SOD1-203ENST00000470944 GBP7Q8N8V2 638 aaPredicted RBP27.5■■□□□ 1.99
SOD1-203ENST00000470944 PMEPA1Q969W9 287 aa27.5■■□□□ 1.99
SOD1-203ENST00000470944 CTRCQ99895 268 aa27.5■■□□□ 1.99
SOD1-203ENST00000470944 WDR55Q9H6Y2 383 aaPredicted RBP27.5■■□□□ 1.99
SOD1-203ENST00000470944 MEAF6Q9HAF1 191 aa27.5■■□□□ 1.99
SOD1-203ENST00000470944 PPT2Q9UMR5 302 aa27.5■■□□□ 1.99
SOD1-203ENST00000470944 MED26O95402 600 aa27.49■■□□□ 1.99
SOD1-203ENST00000470944 ALOX15P16050 662 aaPredicted RBP27.49■■□□□ 1.99
SOD1-203ENST00000470944 PTX3P26022 381 aaPredicted RBP27.49■■□□□ 1.99
SOD1-203ENST00000470944 HK2P52789 917 aa27.49■■□□□ 1.99
SOD1-203ENST00000470944 RGS1Q08116 209 aa27.49■■□□□ 1.99
SOD1-203ENST00000470944 ADPRMQ3LIE5 342 aa27.49■■□□□ 1.99
SOD1-203ENST00000470944 TOR1AIP1Q5JTV8 583 aa27.49■■□□□ 1.99
SOD1-203ENST00000470944 DEPDC1Q5TB30 811 aa27.49■■□□□ 1.99
SOD1-203ENST00000470944 ZNF655Q8N720 491 aaPredicted RBP27.49■■□□□ 1.99
SOD1-203ENST00000470944 ZCCHC10Q8TBK6 192 aa27.49■■□□□ 1.99
SOD1-203ENST00000470944 MS4A6EQ96DS6 147 aa27.49■■□□□ 1.99
SOD1-203ENST00000470944 MRPL1Q9BYD6 325 aaKnown RBP27.49■■□□□ 1.99
SOD1-203ENST00000470944 REXO4Q9GZR2 422 aaKnown RBP27.49■■□□□ 1.99
SOD1-203ENST00000470944 KCNK13Q9HB14 408 aa27.49■■□□□ 1.99
SOD1-203ENST00000470944 FANCEQ9HB96 536 aa27.49■■□□□ 1.99
SOD1-203ENST00000470944 SDHDO14521 159 aa27.48■■□□□ 1.99
SOD1-203ENST00000470944 TIAF1O95411 115 aa27.48■■□□□ 1.99
SOD1-203ENST00000470944 HSD3B1P14060 373 aa27.48■■□□□ 1.99
SOD1-203ENST00000470944 HSD3B2P26439 372 aa27.48■■□□□ 1.99
SOD1-203ENST00000470944 EPHA3P29320 983 aa27.48■■□□□ 1.99
SOD1-203ENST00000470944 ETV5P41161 510 aa27.48■■□□□ 1.99
SOD1-203ENST00000470944 ITGA1P56199 1179 aa27.48■■□□□ 1.99
SOD1-203ENST00000470944 MC2RQ01718 297 aa27.48■■□□□ 1.99
SOD1-203ENST00000470944 TUBB8Q3ZCM7 444 aa27.48■■□□□ 1.99
SOD1-203ENST00000470944 TCTE1Q5JU00 501 aa27.48■■□□□ 1.99
SOD1-203ENST00000470944 TMEM214Q6NUQ4 689 aaKnown RBP27.48■■□□□ 1.99
SOD1-203ENST00000470944 UBE3DQ7Z6J8 389 aa27.48■■□□□ 1.99
SOD1-203ENST00000470944 DTWD1Q8N5C7 304 aa27.48■■□□□ 1.99
SOD1-203ENST00000470944 EBF4Q9BQW3 602 aa27.48■■□□□ 1.99
SOD1-203ENST00000470944 TRIM55Q9BYV6 548 aa27.48■■□□□ 1.99
SOD1-203ENST00000470944 PSD3Q9NYI0 1048 aa27.48■■□□□ 1.99
SOD1-203ENST00000470944 AKAP7Q9P0M2 348 aaPredicted RBP27.48■■□□□ 1.99
SOD1-203ENST00000470944 VPS29Q9UBQ0 182 aa27.48■■□□□ 1.99
SOD1-203ENST00000470944 SERTAD3Q9UJW9 196 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms